RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 C6orf50Q9HD87 102 aa18.01■□□□□ 0.47
SERF1B-208ENST00000515588 CPLX1O14810 134 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 PFKFB2O60825 505 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 DTNBO60941 627 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 SUPT20HL2P0C7V6 817 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 CSF2RAP15509 400 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 SSRP1Q08945 709 aaKnown RBP18■□□□□ 0.47
SERF1B-208ENST00000515588 MTMR1Q13613 665 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 KIAA0753Q2KHM9 967 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 GDF6Q6KF10 455 aaPredicted RBP18■□□□□ 0.47
SERF1B-208ENST00000515588 RASGRP4Q8TDF6 673 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 CCDC12Q8WUD4 166 aaPredicted RBP18■□□□□ 0.47
SERF1B-208ENST00000515588 CRYGNQ8WXF5 182 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 ALG1Q9BT22 464 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 SLKQ9H2G2 1235 aaPredicted RBP18■□□□□ 0.47
SERF1B-208ENST00000515588 PKD2L1Q9P0L9 805 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 HDAC6Q9UBN7 1215 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 DOCK5Q9H7D0 1870 aa18■□□□□ 0.47
SERF1B-208ENST00000515588 NOP56O00567 594 aaKnown RBP17.99■□□□□ 0.47
SERF1B-208ENST00000515588 LGALS2P05162 132 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 NEK4P51957 841 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 CCL23P55773 120 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 ARHGAP4P98171 946 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 SP4Q02446 784 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 HIC1Q14526 733 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 CEP55Q53EZ4 464 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 TRIM22Q8IYM9 498 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 REXO1Q8N1G1 1221 aaKnown RBP17.99■□□□□ 0.47
SERF1B-208ENST00000515588 CDHR1Q96JP9 859 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 AIFM3Q96NN9 605 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 SH3GLB2Q9NR46 395 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 KCNH7Q9NS40 1196 aa17.99■□□□□ 0.47
SERF1B-208ENST00000515588 MEIS1O00470 390 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 MAFGO15525 162 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 DEXIO95424 95 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 LARGE1O95461 756 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 CTDNEP1O95476 244 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 ARP10275 920 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 GNA11P29992 359 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 ANKRD1Q15327 319 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 PTGISQ16647 500 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 ME3Q16798 604 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 TMEM199Q8N511 208 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 GIMAP8Q8ND71 665 aaPredicted RBP17.98■□□□□ 0.47
SERF1B-208ENST00000515588 VWCEQ96DN2 955 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 KATNAL1Q9BW62 490 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 GTF2IRD1Q9UHL9 959 aa17.98■□□□□ 0.47
SERF1B-208ENST00000515588 FAM86B1E9PN63 330 aa17.97■□□□□ 0.47
SERF1B-208ENST00000515588 EDIL3O43854 480 aa17.97■□□□□ 0.47
SERF1B-208ENST00000515588 FAM86B2P0C5J1 330 aa17.97■□□□□ 0.47
SERF1B-208ENST00000515588 ACRP10323 421 aa17.97■□□□□ 0.47
SERF1B-208ENST00000515588 ZNF200P98182 395 aaPredicted RBP17.97■□□□□ 0.47
SERF1B-208ENST00000515588 PPIGQ13427 754 aaKnown RBP eCLIP17.97■□□□□ 0.47
SERF1B-208ENST00000515588 CPLX2Q6PUV4 134 aaKnown RBP17.97■□□□□ 0.47
SERF1B-208ENST00000515588 TRIM50Q86XT4 487 aa17.97■□□□□ 0.47
SERF1B-208ENST00000515588 C7orf31Q8N865 590 aa17.97■□□□□ 0.47
SERF1B-208ENST00000515588 NECAB1Q8N987 351 aa17.97■□□□□ 0.47
SERF1B-208ENST00000515588 CCDC148Q8NFR7 591 aa17.97■□□□□ 0.47
SERF1B-208ENST00000515588 KIF2CQ99661 725 aa17.97■□□□□ 0.47
SERF1B-208ENST00000515588 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.97■□□□□ 0.47
SERF1B-208ENST00000515588 GSTTP1A0A1W2PQM5 241 aa17.96■□□□□ 0.47
SERF1B-208ENST00000515588 H3BRB1 525 aa17.96■□□□□ 0.47
SERF1B-208ENST00000515588 CYP3A4P08684 503 aa17.96■□□□□ 0.47
SERF1B-208ENST00000515588 NLRP5P59047 1200 aa17.96■□□□□ 0.47
SERF1B-208ENST00000515588 ITGB3BPQ13352 177 aaPredicted RBP17.96■□□□□ 0.47
SERF1B-208ENST00000515588 NPY5RQ15761 445 aa17.96■□□□□ 0.47
SERF1B-208ENST00000515588 TMEM240Q5SV17 173 aa17.96■□□□□ 0.47
SERF1B-208ENST00000515588 UTP14CQ5TAP6 766 aaKnown RBP17.96■□□□□ 0.47
SERF1B-208ENST00000515588 BICD2Q8TD16 824 aa17.96■□□□□ 0.47
SERF1B-208ENST00000515588 DHX38Q92620 1227 aaKnown RBP17.96■□□□□ 0.47
SERF1B-208ENST00000515588 SCLYQ96I15 445 aa17.96■□□□□ 0.47
SERF1B-208ENST00000515588 TUT1Q9H6E5 874 aaKnown RBP17.96■□□□□ 0.47
SERF1B-208ENST00000515588 AGO4Q9HCK5 861 aaKnown RBP17.96■□□□□ 0.47
SERF1B-208ENST00000515588 IL23AQ9NPF7 189 aa17.96■□□□□ 0.47
SERF1B-208ENST00000515588 IGLV3-22A0A075B6J6 115 aa17.95■□□□□ 0.46
SERF1B-208ENST00000515588 MCTP2Q6DN12 878 aa17.95■□□□□ 0.46
SERF1B-208ENST00000515588 NIPA1Q7RTP0 329 aa17.95■□□□□ 0.46
SERF1B-208ENST00000515588 RNPC3Q96LT9 517 aaKnown RBP17.95■□□□□ 0.46
SERF1B-208ENST00000515588 PCDHA4Q9UN74 947 aa17.95■□□□□ 0.46
SERF1B-208ENST00000515588 NOD1Q9Y239 953 aa17.95■□□□□ 0.46
SERF1B-208ENST00000515588 RBAK-RBAKDNI3L0D1 243 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 M0R2N6 131 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 CDKL5O76039 1030 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 HOXC8P31273 242 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 TCF7P36402 384 aaPredicted RBP17.94■□□□□ 0.46
SERF1B-208ENST00000515588 ZNF76P36508 570 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 ST3GAL1Q11201 340 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 ZNF365Q70YC5 407 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 SEPT1Q8WYJ6 367 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 WNT8BQ93098 351 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 GTF3C6Q969F1 213 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 UIMC1Q96RL1 719 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 JPH1Q9HDC5 661 aaPredicted RBP17.94■□□□□ 0.46
SERF1B-208ENST00000515588 GJB4Q9NTQ9 266 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 NFASCO94856 1347 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 STK36Q9NRP7 1315 aa17.94■□□□□ 0.46
SERF1B-208ENST00000515588 PITPNM1O00562 1244 aa17.93■□□□□ 0.46
SERF1B-208ENST00000515588 IQCF3P0C7M6 154 aa17.93■□□□□ 0.46
SERF1B-208ENST00000515588 SMIM10L2AP0DMW4 78 aa17.93■□□□□ 0.46
SERF1B-208ENST00000515588 SMIM10L2BP0DMW5 78 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms