RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 CABYRO75952 493 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 TDP2O95551 362 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 ASGR1P07306 291 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 MMP3P08254 477 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 COL6A1P12109 1028 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 PTGS1P23219 599 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 TRAPPC10P48553 1259 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 BEX3Q00994 111 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 DGKDQ16760 1214 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 MCTP1Q6DN14 999 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 CYFIP1Q7L576 1253 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 AFG1LQ8WV93 481 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 PAWRQ96IZ0 340 aaKnown RBP13.5□□□□□ -0.25
SNF8-215ENST00000515572 GLT1D1Q96MS3 346 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 ZNF577Q9BSK1 485 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 TBC1D22BQ9NU19 505 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
SNF8-215ENST00000515572 DDX25Q9UHL0 483 aaKnown RBP13.5□□□□□ -0.25
SNF8-215ENST00000515572 NOL7Q9UMY1 257 aaKnown RBP13.5□□□□□ -0.25
SNF8-215ENST00000515572 A0A1W2PQ45 241 aaPredicted RBP13.49□□□□□ -0.25
SNF8-215ENST00000515572 A0A1W2PQY0 241 aa13.49□□□□□ -0.25
SNF8-215ENST00000515572 TBX3O15119 743 aa13.49□□□□□ -0.25
SNF8-215ENST00000515572 PPFIA4O75335 1185 aa13.49□□□□□ -0.25
SNF8-215ENST00000515572 CAPN15O75808 1086 aa13.49□□□□□ -0.25
SNF8-215ENST00000515572 SYT1P21579 422 aa13.49□□□□□ -0.25
SNF8-215ENST00000515572 RGS19P49795 217 aa13.49□□□□□ -0.25
SNF8-215ENST00000515572 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
SNF8-215ENST00000515572 ORC2Q13416 577 aaPredicted RBP13.49□□□□□ -0.25
SNF8-215ENST00000515572 HSDL1Q3SXM5 330 aa13.49□□□□□ -0.25
SNF8-215ENST00000515572 DIS3LQ8TF46 1054 aaKnown RBP13.49□□□□□ -0.25
SNF8-215ENST00000515572 RIT2Q99578 217 aa13.49□□□□□ -0.25
SNF8-215ENST00000515572 JPH1Q9HDC5 661 aaPredicted RBP13.49□□□□□ -0.25
SNF8-215ENST00000515572 TCEAL9Q9UHQ7 104 aa13.49□□□□□ -0.25
SNF8-215ENST00000515572 ELP1O95163 1332 aa13.48□□□□□ -0.25
SNF8-215ENST00000515572 VPS37CA5D8V6 355 aaPredicted RBP13.48□□□□□ -0.25
SNF8-215ENST00000515572 KIF28PB7ZC32 967 aa13.48□□□□□ -0.25
SNF8-215ENST00000515572 MSH4O15457 936 aa13.48□□□□□ -0.25
SNF8-215ENST00000515572 HOXD8P13378 290 aaPredicted RBP13.48□□□□□ -0.25
SNF8-215ENST00000515572 PURAQ00577 322 aaKnown RBP13.48□□□□□ -0.25
SNF8-215ENST00000515572 ITGB3BPQ13352 177 aaPredicted RBP13.48□□□□□ -0.25
SNF8-215ENST00000515572 RILPL1Q5EBL4 403 aa13.48□□□□□ -0.25
SNF8-215ENST00000515572 SLC5A5Q92911 643 aa13.48□□□□□ -0.25
SNF8-215ENST00000515572 FAM20AQ96MK3 541 aa13.48□□□□□ -0.25
SNF8-215ENST00000515572 GPR20Q99678 358 aa13.48□□□□□ -0.25
SNF8-215ENST00000515572 MTG1Q9BT17 334 aaPredicted RBP13.48□□□□□ -0.25
SNF8-215ENST00000515572 SEZ6LQ9BYH1 1024 aa13.48□□□□□ -0.25
SNF8-215ENST00000515572 SENP6Q9GZR1 1112 aaPredicted RBP13.48□□□□□ -0.25
SNF8-215ENST00000515572 STARD7Q9NQZ5 370 aa13.48□□□□□ -0.25
SNF8-215ENST00000515572 PKD2L1Q9P0L9 805 aa13.48□□□□□ -0.25
SNF8-215ENST00000515572 SLC9A2Q9UBY0 812 aa13.48□□□□□ -0.25
SNF8-215ENST00000515572 SCN10AQ9Y5Y9 1956 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 WDR81Q562E7 1941 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 STX6O43752 255 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 SLC37A4O43826 429 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 SORBS3O60504 671 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 MYL3P08590 195 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 KRT76Q01546 638 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 ZNF746Q6NUN9 644 aaPredicted RBP13.47□□□□□ -0.25
SNF8-215ENST00000515572 CXCL17Q6UXB2 119 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 BRAPQ7Z569 592 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 SLFN12Q8IYM2 578 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 ETNPPLQ8TBG4 499 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 HTATIP2Q9BUP3 242 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 KATNAL1Q9BW62 490 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 BCAS3Q9H6U6 928 aa13.47□□□□□ -0.25
SNF8-215ENST00000515572 DHX15O43143 795 aaKnown RBP13.46□□□□□ -0.25
SNF8-215ENST00000515572 NEMFO60524 1076 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 GAS7O60861 476 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 BAG4O95429 457 aaKnown RBP13.46□□□□□ -0.25
SNF8-215ENST00000515572 F2P00734 622 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 SP4Q02446 784 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 TTC38Q5R3I4 469 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 C1orf53Q5VUE5 145 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 LRCH2Q5VUJ6 765 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 SLC39A5Q6ZMH5 540 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 FERMT2Q96AC1 680 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 TEKT3Q9BXF9 490 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 KCNMB3Q9NPA1 279 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 MYH15Q9Y2K3 1946 aa13.46□□□□□ -0.25
SNF8-215ENST00000515572 MYH9P35579 1960 aaKnown RBP13.45□□□□□ -0.26
SNF8-215ENST00000515572 ALPK3Q96L96 1907 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 A0A0U1RQG5 324 aaPredicted RBP13.45□□□□□ -0.26
SNF8-215ENST00000515572 GSTTP1A0A1W2PQM5 241 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 MARCH6O60337 910 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 PSMD10O75832 226 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 ATP2B1P20020 1258 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 SFNP31947 248 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 MCM7P33993 719 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 TCF7P36402 384 aaPredicted RBP13.45□□□□□ -0.26
SNF8-215ENST00000515572 ACTR2P61160 394 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 SNX17Q15036 470 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 CALCRLQ16602 461 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 POTEDQ86YR6 584 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 SMAP1Q8IYB5 467 aaPredicted RBP13.45□□□□□ -0.26
SNF8-215ENST00000515572 SPRYD3Q8NCJ5 442 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 VTI1AQ96AJ9 217 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 C16orf70Q9BSU1 422 aa13.45□□□□□ -0.26
SNF8-215ENST00000515572 ZSCAN16Q9H4T2 348 aaPredicted RBP13.45□□□□□ -0.26
SNF8-215ENST00000515572 ZNF215Q9UL58 517 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms