RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 EEF2KMTQ96G04 330 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 RRP15Q9Y3B9 282 aaKnown RBP17.38■□□□□ 0.37
TRIM41-207ENST00000515223 MYO3BQ8WXR4 1341 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 LRRIQ1Q96JM4 1722 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 SPDYE1Q8NFV5 336 aaPredicted RBP17.38■□□□□ 0.37
TRIM41-207ENST00000515223 RUNDC3BQ96NL0 473 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 C21orf2O43822 256 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 NT5C2P49902 561 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 COA7Q96BR5 231 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 HAUS8Q9BT25 410 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 VCX3AQ9NNX9 186 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 CDK12Q9NYV4 1490 aaPredicted RBP17.38■□□□□ 0.37
TRIM41-207ENST00000515223 HNRNPH2P55795 449 aaKnown RBP17.38■□□□□ 0.37
TRIM41-207ENST00000515223 TSNAXIP1Q2TAA8 658 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 SLFNL1Q499Z3 407 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 JADE1Q6IE81 842 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 TTBK2Q6IQ55 1244 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 CLEC4GQ6UXB4 293 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 DSTYKQ6XUX3 929 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 GANCQ8TET4 914 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 PIGSQ96S52 555 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 HAUS4Q9H6D7 363 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 POLR3EQ9NVU0 708 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 RPAP1Q9BWH6 1393 aaPredicted RBP17.37■□□□□ 0.37
TRIM41-207ENST00000515223 SASH1O94885 1247 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 TBCKQ8TEA7 893 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 IRAK4Q9NWZ3 460 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 TMTC4Q5T4D3 741 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 CCNYQ8ND76 341 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 NXF1Q9UBU9 619 aaKnown RBP17.37■□□□□ 0.37
TRIM41-207ENST00000515223 CDC23Q9UJX2 597 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 PASKQ96RG2 1323 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 GPC4O75487 556 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 PDE1BQ01064 536 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 NFX1Q12986 1120 aaKnown RBP17.37■□□□□ 0.37
TRIM41-207ENST00000515223 IQCB1Q15051 598 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 APOA5Q6Q788 366 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 MGARPQ8TDB4 240 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 ATP6V1E2Q96A05 226 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 UBN1Q9NPG3 1134 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 CFAP74Q9C0B2 1584 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 PALLDQ8WX93 1383 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 PTPROQ16827 1216 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 ZNF341Q9BYN7 854 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 CAPN7Q9Y6W3 813 aa17.37■□□□□ 0.37
TRIM41-207ENST00000515223 BUB1O43683 1085 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 ADD2P35612 726 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 YWHAGP61981 247 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRIM41-207ENST00000515223 GSDMAQ96QA5 445 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 GJB4Q9NTQ9 266 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 IKBKBO14920 756 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 TMEM179Q6ZVK1 233 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 ACRBPQ8NEB7 543 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 SRP68Q9UHB9 627 aaKnown RBP17.36■□□□□ 0.37
TRIM41-207ENST00000515223 CPSF1Q10570 1443 aaKnown RBP17.36■□□□□ 0.37
TRIM41-207ENST00000515223 RPS6KA4O75676 772 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 EPHB1P54762 984 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 KIF23Q02241 960 aaPredicted RBP17.36■□□□□ 0.37
TRIM41-207ENST00000515223 AIFM3Q96NN9 605 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.36■□□□□ 0.37
TRIM41-207ENST00000515223 IGSF1Q8N6C5 1336 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 MYLK4Q86YV6 388 aaPredicted RBP17.36■□□□□ 0.37
TRIM41-207ENST00000515223 RPF1Q9H9Y2 349 aaKnown RBP17.36■□□□□ 0.37
TRIM41-207ENST00000515223 CAPN12Q6ZSI9 719 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 CNOT6LQ96LI5 555 aaKnown RBP17.36■□□□□ 0.37
TRIM41-207ENST00000515223 SAMSN1Q9NSI8 373 aaKnown RBP17.36■□□□□ 0.37
TRIM41-207ENST00000515223 MAN1B1Q9UKM7 699 aa17.36■□□□□ 0.37
TRIM41-207ENST00000515223 MYL3P08590 195 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 IRX4P78413 519 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 CATSPER4Q7RTX7 472 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 DHTKD1Q96HY7 919 aaPredicted RBP17.35■□□□□ 0.37
TRIM41-207ENST00000515223 HOXC10Q9NYD6 342 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 LRRC7Q96NW7 1537 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 AFPP02771 609 aaKnown RBP17.35■□□□□ 0.37
TRIM41-207ENST00000515223 MESDQ14696 234 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 BSDC1Q9NW68 430 aaPredicted RBP17.35■□□□□ 0.37
TRIM41-207ENST00000515223 NLRP1Q9C000 1473 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 ANKARQ7Z5J8 1434 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 EIF2AK2P19525 551 aaKnown RBP17.35■□□□□ 0.37
TRIM41-207ENST00000515223 VSTM4Q8IW00 320 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 NDUFAF2Q8N183 169 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 HVCN1Q96D96 273 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 ERBB3P21860 1342 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 CCT5P48643 541 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 BCAS4Q8TDM0 211 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 TCP11Q8WWU5 503 aa17.35■□□□□ 0.37
TRIM41-207ENST00000515223 FAM49AQ9H0Q0 323 aaPredicted RBP17.35■□□□□ 0.37
TRIM41-207ENST00000515223 GOLGA8SH3BPF8 625 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 TXNDC9O14530 226 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 CIITAP33076 1130 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 ARHGAP25P42331 645 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
TRIM41-207ENST00000515223 RNF207Q6ZRF8 634 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 ZBTB33Q86T24 672 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 CCDC170Q8IYT3 715 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 TAB3Q8N5C8 712 aaPredicted RBP17.34■□□□□ 0.37
TRIM41-207ENST00000515223 CEP120Q8N960 986 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 CAPS2Q9BXY5 557 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 PPP1R12CQ9BZL4 782 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 EPC1Q9H2F5 836 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms