RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 KIAA0586Q9BVV6 1533 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 FFAR3O14843 346 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 PRODHO43272 600 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 DLX3O60479 287 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 PLA2G1BP04054 148 aaKnown RBP5.18□□□□□ -1.58
CAST-242ENST00000515063 PABPC1P11940 636 aaKnown RBP5.18□□□□□ -1.58
CAST-242ENST00000515063 GRIA2P42262 883 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 NKX3-2P78367 333 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 RASGRF1Q13972 1273 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 VMACQ2NL98 169 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 MTERF2Q49AM1 385 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 VWA3BQ502W6 1294 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 EMC4Q5J8M3 183 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 CYP4F22Q6NT55 531 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 CD300LDQ6UXZ3 194 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 LIPIQ6XZB0 460 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 USP53Q70EK8 1073 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 TRIM48Q8IWZ4 208 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 ZBTB8AQ96BR9 441 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 SPATA9Q9BWV2 254 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 CCDC113Q9H0I3 377 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 RTEL1Q9NZ71 1219 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 PLA2G2DQ9UNK4 145 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 MSRB2Q9Y3D2 182 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 PCDHB4Q9Y5E5 795 aa5.18□□□□□ -1.58
CAST-242ENST00000515063 APPP05067 770 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 C8BP07358 591 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 LCP1P13796 627 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 GTF2F1P35269 517 aaKnown RBP eCLIP5.17□□□□□ -1.58
CAST-242ENST00000515063 SLURP1P55000 103 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 FAM50AQ14320 339 aaKnown RBP5.17□□□□□ -1.58
CAST-242ENST00000515063 NFIXQ14938 502 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 KIZQ2M2Z5 673 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 DENND5AQ6IQ26 1287 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 FRMD5Q7Z6J6 570 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 TTLL6Q8N841 843 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 LINC00482Q8N8I6 264 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 WRNIP1Q96S55 665 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 ALG1Q9BT22 464 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 ARHGEF4Q9NR80 690 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 USP40Q9NVE5 1235 aa5.17□□□□□ -1.58
CAST-242ENST00000515063 EPRSP07814 1512 aaKnown RBP5.17□□□□□ -1.58
CAST-242ENST00000515063 KIAA0556O60303 1618 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 NAIPQ13075 1403 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 MAGI1Q96QZ7 1491 aaPredicted RBP5.16□□□□□ -1.58
CAST-242ENST00000515063 ARNTLO00327 626 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 CYP7B1O75881 506 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 NAT1P18440 290 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 SPIRE1Q08AE8 756 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 STYK1Q6J9G0 422 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 LRP10Q7Z4F1 713 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 IFNL3Q8IZI9 196 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 CARFQ8N187 725 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 KYQ8NBH2 561 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.16□□□□□ -1.58
CAST-242ENST00000515063 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.16□□□□□ -1.58
CAST-242ENST00000515063 RELTQ969Z4 430 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 TOE1Q96GM8 510 aaKnown RBP5.16□□□□□ -1.58
CAST-242ENST00000515063 TEPSINQ96N21 525 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 CDC6Q99741 560 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 XYLT2Q9H1B5 865 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 SMOC1Q9H4F8 434 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 DTLQ9NZJ0 730 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 MYOTQ9UBF9 498 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 FBXL7Q9UJT9 491 aa5.16□□□□□ -1.58
CAST-242ENST00000515063 MAGI3Q5TCQ9 1506 aa5.15□□□□□ -1.58
CAST-242ENST00000515063 OTOL1A6NHN0 477 aaPredicted RBP5.15□□□□□ -1.59
CAST-242ENST00000515063 CCDC85CA6NKD9 419 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 GRK2P25098 689 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 GRK3P35626 688 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 SARSP49591 514 aaKnown RBP5.15□□□□□ -1.59
CAST-242ENST00000515063 GJA9P57773 515 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 GPR85P60893 370 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 SUMO1P63165 101 aaKnown RBP5.15□□□□□ -1.59
CAST-242ENST00000515063 SSRP1Q08945 709 aaKnown RBP5.15□□□□□ -1.59
CAST-242ENST00000515063 ZC3H12BQ5HYM0 836 aaKnown RBP5.15□□□□□ -1.59
CAST-242ENST00000515063 LBX2Q6XYB7 198 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 SCUBE1Q8IWY4 988 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 TP53I13Q8NBR0 393 aaPredicted RBP5.15□□□□□ -1.59
CAST-242ENST00000515063 FEZF2Q8TBJ5 459 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 OSBP2Q969R2 916 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 C11orf84Q9BUA3 381 aaPredicted RBP5.15□□□□□ -1.59
CAST-242ENST00000515063 RAPGEF6Q8TEU7 1601 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 ADCY10Q96PN6 1610 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 ROCK1Q13464 1354 aa5.15□□□□□ -1.59
CAST-242ENST00000515063 PTPRKQ15262 1439 aa5.14□□□□□ -1.59
CAST-242ENST00000515063 GRIN2AQ12879 1464 aa5.14□□□□□ -1.59
CAST-242ENST00000515063 DISP1Q96F81 1524 aa5.14□□□□□ -1.59
CAST-242ENST00000515063 EIF4G3O43432 1585 aaKnown RBP5.14□□□□□ -1.59
CAST-242ENST00000515063 A0A0G2JLL6 359 aaPredicted RBP5.14□□□□□ -1.59
CAST-242ENST00000515063 FAM47E-STBD1D6RA91 191 aa5.14□□□□□ -1.59
CAST-242ENST00000515063 AQP7O14520 342 aa5.14□□□□□ -1.59
CAST-242ENST00000515063 TADA3O75528 432 aa5.14□□□□□ -1.59
CAST-242ENST00000515063 GNAT1P11488 350 aa5.14□□□□□ -1.59
CAST-242ENST00000515063 SYN1P17600 705 aa5.14□□□□□ -1.59
CAST-242ENST00000515063 LONRF2Q1L5Z9 754 aa5.14□□□□□ -1.59
CAST-242ENST00000515063 MAMDC2Q7Z304 686 aaPredicted RBP5.14□□□□□ -1.59
CAST-242ENST00000515063 FAM124AQ86V42 546 aa5.14□□□□□ -1.59
CAST-242ENST00000515063 TTLL11Q8NHH1 800 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms