RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 FOXE3Q13461 319 aa6.59□□□□□ -1.35
NEDD4-211ENST00000514893 TMC5Q6UXY8 1006 aa6.59□□□□□ -1.35
NEDD4-211ENST00000514893 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.59□□□□□ -1.35
NEDD4-211ENST00000514893 BTN2A2Q8WVV5 523 aa6.59□□□□□ -1.35
NEDD4-211ENST00000514893 EPB41L1Q9H4G0 881 aa6.59□□□□□ -1.35
NEDD4-211ENST00000514893 CLDND1Q9NY35 253 aa6.59□□□□□ -1.35
NEDD4-211ENST00000514893 MYOTQ9UBF9 498 aa6.59□□□□□ -1.35
NEDD4-211ENST00000514893 KRIT1O00522 736 aa6.58□□□□□ -1.36
NEDD4-211ENST00000514893 PURAQ00577 322 aaKnown RBP6.58□□□□□ -1.36
NEDD4-211ENST00000514893 KRTAP1-1Q07627 177 aa6.58□□□□□ -1.36
NEDD4-211ENST00000514893 CYP4F22Q6NT55 531 aa6.58□□□□□ -1.36
NEDD4-211ENST00000514893 Q6ZUG5 572 aa6.58□□□□□ -1.36
NEDD4-211ENST00000514893 RALYLQ86SE5 291 aaKnown RBP6.58□□□□□ -1.36
NEDD4-211ENST00000514893 MEGF9Q9H1U4 602 aa6.58□□□□□ -1.36
NEDD4-211ENST00000514893 KCNJ6P48051 423 aa6.57□□□□□ -1.36
NEDD4-211ENST00000514893 FHL2Q14192 279 aa6.57□□□□□ -1.36
NEDD4-211ENST00000514893 VASNQ6EMK4 673 aa6.57□□□□□ -1.36
NEDD4-211ENST00000514893 KREMEN2Q8NCW0 462 aa6.57□□□□□ -1.36
NEDD4-211ENST00000514893 GIMAP8Q8ND71 665 aaPredicted RBP6.57□□□□□ -1.36
NEDD4-211ENST00000514893 NUDT10Q8NFP7 164 aa6.57□□□□□ -1.36
NEDD4-211ENST00000514893 NUDT11Q96G61 164 aa6.57□□□□□ -1.36
NEDD4-211ENST00000514893 LMF1Q96S06 567 aa6.57□□□□□ -1.36
NEDD4-211ENST00000514893 ING1Q9UK53 422 aaPredicted RBP6.57□□□□□ -1.36
NEDD4-211ENST00000514893 STRIP2Q9ULQ0 834 aa6.57□□□□□ -1.36
NEDD4-211ENST00000514893 NPIPB8E9PQR5 432 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 KLHL18O94889 574 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 FBXO21O94952 628 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 CNOT4O95628 575 aaKnown RBP6.56□□□□□ -1.36
NEDD4-211ENST00000514893 GJA8P48165 433 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 SMAD2Q15796 467 aaKnown RBP6.56□□□□□ -1.36
NEDD4-211ENST00000514893 SV2CQ496J9 727 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 TCTN3Q6NUS6 607 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 PPIL6Q8IXY8 311 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 IFNL2Q8IZJ0 200 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 AJUBAQ96IF1 538 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 LGR4Q9BXB1 951 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 DLL4Q9NR61 685 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 C11orf21Q9P2W6 132 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 WASF3Q9UPY6 502 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.56□□□□□ -1.36
NEDD4-211ENST00000514893 SLC4A7Q9Y6M7 1214 aa6.56□□□□□ -1.36
NEDD4-211ENST00000514893 WDR33Q9C0J8 1336 aaKnown RBP6.55□□□□□ -1.36
NEDD4-211ENST00000514893 ITGAVP06756 1048 aa6.55□□□□□ -1.36
NEDD4-211ENST00000514893 COL6A1P12109 1028 aa6.55□□□□□ -1.36
NEDD4-211ENST00000514893 NRN1LQ496H8 165 aa6.55□□□□□ -1.36
NEDD4-211ENST00000514893 FAM169BQ8N8A8 192 aa6.55□□□□□ -1.36
NEDD4-211ENST00000514893 TTLL11Q8NHH1 800 aa6.55□□□□□ -1.36
NEDD4-211ENST00000514893 ADOQ96SZ5 270 aa6.55□□□□□ -1.36
NEDD4-211ENST00000514893 ASH2LQ9UBL3 628 aa6.55□□□□□ -1.36
NEDD4-211ENST00000514893 FBXL7Q9UJT9 491 aa6.55□□□□□ -1.36
NEDD4-211ENST00000514893 ZFR2Q9UPR6 939 aaKnown RBP6.55□□□□□ -1.36
NEDD4-211ENST00000514893 FOXS1O43638 330 aa6.54□□□□□ -1.36
NEDD4-211ENST00000514893 ABHD18Q0P651 414 aa6.54□□□□□ -1.36
NEDD4-211ENST00000514893 MIIPQ5JXC2 388 aa6.54□□□□□ -1.36
NEDD4-211ENST00000514893 RNF207Q6ZRF8 634 aa6.54□□□□□ -1.36
NEDD4-211ENST00000514893 DTX3Q8N9I9 347 aa6.54□□□□□ -1.36
NEDD4-211ENST00000514893 ANAPC16Q96DE5 110 aa6.54□□□□□ -1.36
NEDD4-211ENST00000514893 GNRHR2Q96P88 292 aa6.54□□□□□ -1.36
NEDD4-211ENST00000514893 SLC6A20Q9NP91 592 aa6.54□□□□□ -1.36
NEDD4-211ENST00000514893 NUB1Q9Y5A7 615 aa6.54□□□□□ -1.36
NEDD4-211ENST00000514893 CKMP06732 381 aa6.53□□□□□ -1.36
NEDD4-211ENST00000514893 LCP1P13796 627 aa6.53□□□□□ -1.36
NEDD4-211ENST00000514893 TAX1BP1Q86VP1 789 aa6.53□□□□□ -1.36
NEDD4-211ENST00000514893 METTL16Q86W50 562 aaKnown RBP6.53□□□□□ -1.36
NEDD4-211ENST00000514893 ZNF227Q86WZ6 799 aa6.53□□□□□ -1.36
NEDD4-211ENST00000514893 EDAQ92838 391 aa6.53□□□□□ -1.36
NEDD4-211ENST00000514893 ZNF503Q96F45 646 aa6.53□□□□□ -1.36
NEDD4-211ENST00000514893 LRRC37BQ96QE4 947 aa6.53□□□□□ -1.36
NEDD4-211ENST00000514893 CSRNP2Q9H175 543 aa6.53□□□□□ -1.36
NEDD4-211ENST00000514893 TBX1O43435 398 aa6.52□□□□□ -1.37
NEDD4-211ENST00000514893 KNG1P01042 644 aa6.52□□□□□ -1.37
NEDD4-211ENST00000514893 ENO2P09104 434 aaPredicted RBP6.52□□□□□ -1.37
NEDD4-211ENST00000514893 VAMP1P23763 118 aa6.52□□□□□ -1.37
NEDD4-211ENST00000514893 SMN1Q16637 294 aaKnown RBP6.52□□□□□ -1.37
NEDD4-211ENST00000514893 PRSS53Q2L4Q9 553 aa6.52□□□□□ -1.37
NEDD4-211ENST00000514893 ZNF568Q3ZCX4 644 aa6.52□□□□□ -1.37
NEDD4-211ENST00000514893 REXO1L1PQ8IX06 675 aa6.52□□□□□ -1.37
NEDD4-211ENST00000514893 COMTP21964 271 aa6.51□□□□□ -1.37
NEDD4-211ENST00000514893 MCM7P33993 719 aa6.51□□□□□ -1.37
NEDD4-211ENST00000514893 GFRA1P56159 465 aa6.51□□□□□ -1.37
NEDD4-211ENST00000514893 SF1Q15637 639 aaKnown RBP6.51□□□□□ -1.37
NEDD4-211ENST00000514893 USP39Q53GS9 565 aaKnown RBP6.51□□□□□ -1.37
NEDD4-211ENST00000514893 PROSER1Q86XN7 944 aa6.51□□□□□ -1.37
NEDD4-211ENST00000514893 FAM178BQ8IXR5 827 aa6.51□□□□□ -1.37
NEDD4-211ENST00000514893 TMEM145Q8NBT3 493 aa6.51□□□□□ -1.37
NEDD4-211ENST00000514893 CLEC4DQ8WXI8 215 aa6.51□□□□□ -1.37
NEDD4-211ENST00000514893 CHFRQ96EP1 664 aa6.51□□□□□ -1.37
NEDD4-211ENST00000514893 ARHGAP20Q9P2F6 1191 aa6.51□□□□□ -1.37
NEDD4-211ENST00000514893 RBPJLQ9UBG7 517 aa6.51□□□□□ -1.37
NEDD4-211ENST00000514893 NPFFR2Q9Y5X5 522 aa6.51□□□□□ -1.37
NEDD4-211ENST00000514893 SLC27A2O14975 620 aa6.5□□□□□ -1.37
NEDD4-211ENST00000514893 CSF2RBP32927 897 aa6.5□□□□□ -1.37
NEDD4-211ENST00000514893 INHBEP58166 350 aa6.5□□□□□ -1.37
NEDD4-211ENST00000514893 RAC3P60763 192 aa6.5□□□□□ -1.37
NEDD4-211ENST00000514893 GRIN1Q05586 938 aa6.5□□□□□ -1.37
NEDD4-211ENST00000514893 DPTQ07507 201 aa6.5□□□□□ -1.37
NEDD4-211ENST00000514893 AGBL4Q5VU57 503 aa6.5□□□□□ -1.37
NEDD4-211ENST00000514893 DENND5AQ6IQ26 1287 aa6.5□□□□□ -1.37
NEDD4-211ENST00000514893 PIP4K2CQ8TBX8 421 aa6.5□□□□□ -1.37
NEDD4-211ENST00000514893 NEIL1Q96FI4 390 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms