RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 GNAQP50148 359 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 SP4Q02446 784 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 UBE2SQ16763 222 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 PCNX4Q63HM2 1172 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 CNKSR3Q6P9H4 555 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 METTL7BQ6UX53 244 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 TMTC3Q6ZXV5 915 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 TCEANC2Q96MN5 208 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 TET1Q8NFU7 2136 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 PTPRSQ13332 1948 aa15.33■□□□□ 0.05
PFDN1-206ENST00000514611 C17orf102A2RUQ5 167 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 LCHNA4D1U4 455 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 H3BRB1 525 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 SMIM10L2AP0DMW4 78 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 SMIM10L2BP0DMW5 78 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 CALM1P0DP23 149 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 CALM2P0DP24 149 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 CALM3P0DP25 149 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 HOXC8P31273 242 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 TAP1Q03518 808 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 NEDD9Q14511 834 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 CENPQQ7L2Z9 268 aaPredicted RBP15.33■□□□□ 0.04
PFDN1-206ENST00000514611 TMTC2Q8N394 836 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 GPR20Q99678 358 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 TUT1Q9H6E5 874 aaKnown RBP15.33■□□□□ 0.04
PFDN1-206ENST00000514611 THEGQ9P2T0 379 aa15.33■□□□□ 0.04
PFDN1-206ENST00000514611 TREHO43280 583 aa15.32■□□□□ 0.04
PFDN1-206ENST00000514611 TLL1O43897 1013 aa15.32■□□□□ 0.04
PFDN1-206ENST00000514611 PARNO95453 639 aaKnown RBP15.32■□□□□ 0.04
PFDN1-206ENST00000514611 THPOP40225 353 aa15.32■□□□□ 0.04
PFDN1-206ENST00000514611 TJAP1Q5JTD0 557 aa15.32■□□□□ 0.04
PFDN1-206ENST00000514611 HEATR3Q7Z4Q2 680 aa15.32■□□□□ 0.04
PFDN1-206ENST00000514611 SERINC5Q86VE9 423 aa15.32■□□□□ 0.04
PFDN1-206ENST00000514611 SGMS1Q86VZ5 419 aa15.32■□□□□ 0.04
PFDN1-206ENST00000514611 FANCBQ8NB91 859 aa15.32■□□□□ 0.04
PFDN1-206ENST00000514611 ARNTL2Q8WYA1 636 aa15.32■□□□□ 0.04
PFDN1-206ENST00000514611 ATP6V0A1Q93050 837 aa15.32■□□□□ 0.04
PFDN1-206ENST00000514611 CNTNAP5Q8WYK1 1306 aa15.32■□□□□ 0.04
PFDN1-206ENST00000514611 MYH7BA7E2Y1 1941 aa15.31■□□□□ 0.04
PFDN1-206ENST00000514611 KIF28PB7ZC32 967 aa15.31■□□□□ 0.04
PFDN1-206ENST00000514611 CTSHP09668 335 aa15.31■□□□□ 0.04
PFDN1-206ENST00000514611 ADCK5Q3MIX3 580 aa15.31■□□□□ 0.04
PFDN1-206ENST00000514611 UTP14CQ5TAP6 766 aaKnown RBP15.31■□□□□ 0.04
PFDN1-206ENST00000514611 KRT40Q6A162 431 aa15.31■□□□□ 0.04
PFDN1-206ENST00000514611 APOA5Q6Q788 366 aa15.31■□□□□ 0.04
PFDN1-206ENST00000514611 RASEFQ8IZ41 740 aa15.31■□□□□ 0.04
PFDN1-206ENST00000514611 NEK1Q96PY6 1258 aa15.31■□□□□ 0.04
PFDN1-206ENST00000514611 USP26Q9BXU7 913 aa15.31■□□□□ 0.04
PFDN1-206ENST00000514611 RNPEPQ9H4A4 650 aa15.31■□□□□ 0.04
PFDN1-206ENST00000514611 PSTPIP2Q9H939 334 aa15.31■□□□□ 0.04
PFDN1-206ENST00000514611 TRIP12Q14669 1992 aaPredicted RBP15.31■□□□□ 0.04
PFDN1-206ENST00000514611 ATP9AO75110 1047 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 LGR5O75473 907 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 KCNA2P16389 499 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 ITGB5P18084 799 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 RNF20Q5VTR2 975 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 WWC2Q6AWC2 1192 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 TYW1BQ6NUM6 668 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 XRRA1Q6P2D8 792 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 NLRX1Q86UT6 975 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 SENP7Q9BQF6 1050 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 OSBPL7Q9BZF2 842 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 DOCK5Q9H7D0 1870 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 SETD4Q9NVD3 440 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 PKD2L1Q9P0L9 805 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 MTCH2Q9Y6C9 303 aa15.3■□□□□ 0.04
PFDN1-206ENST00000514611 COL4A4P53420 1690 aaPredicted RBP15.29■□□□□ 0.04
PFDN1-206ENST00000514611 ABHD14A-ACY1A0A1B0GW23 586 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 SPDYE3A6NKU9 549 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 RSPH10B2B2RC85 870 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 CDC45O75419 566 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 GJB5O95377 273 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 RSPH10BP0C881 870 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 FAM117BQ6P1L5 589 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.29■□□□□ 0.04
PFDN1-206ENST00000514611 DBF4BQ8NFT6 615 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 LMBR1Q8WVP7 490 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 ATXN2LQ8WWM7 1075 aaKnown RBP15.29■□□□□ 0.04
PFDN1-206ENST00000514611 SYMPKQ92797 1274 aaKnown RBP15.29■□□□□ 0.04
PFDN1-206ENST00000514611 GPRASP2Q96D09 838 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 PGBD1Q96JS3 809 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 ZBED2Q9BTP6 218 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 ZNF215Q9UL58 517 aaPredicted RBP15.29■□□□□ 0.04
PFDN1-206ENST00000514611 PCDHA6Q9UN73 950 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 PCDHA8Q9Y5H6 950 aa15.29■□□□□ 0.04
PFDN1-206ENST00000514611 EMSYQ7Z589 1322 aa15.28■□□□□ 0.04
PFDN1-206ENST00000514611 MARK3P27448 753 aa15.28■□□□□ 0.04
PFDN1-206ENST00000514611 TCF7P36402 384 aaPredicted RBP15.28■□□□□ 0.04
PFDN1-206ENST00000514611 ARHGAP4P98171 946 aa15.28■□□□□ 0.04
PFDN1-206ENST00000514611 EXOSC10Q01780 885 aaKnown RBP15.28■□□□□ 0.04
PFDN1-206ENST00000514611 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
PFDN1-206ENST00000514611 MTMR1Q13613 665 aa15.28■□□□□ 0.04
PFDN1-206ENST00000514611 IKBKEQ14164 716 aa15.28■□□□□ 0.04
PFDN1-206ENST00000514611 RTN1Q16799 776 aa15.28■□□□□ 0.04
PFDN1-206ENST00000514611 SYNE3Q6ZMZ3 975 aa15.28■□□□□ 0.04
PFDN1-206ENST00000514611 GDPD5Q8WTR4 605 aa15.28■□□□□ 0.04
PFDN1-206ENST00000514611 ASB2Q96Q27 587 aa15.28■□□□□ 0.04
PFDN1-206ENST00000514611 RBM28Q9NW13 759 aaKnown RBP15.28■□□□□ 0.04
PFDN1-206ENST00000514611 MTUS1Q9ULD2 1270 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms