RNA–Protein interactions for RNA: ENST00000513893.5

LINC00461-215, long intergenic non-protein coding RNA 461, human

TSL 4

Gene LINC00461, Length 555 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00461-215	ENST00000513893	STAM2	O75886	525 aa		18.82	■□□□□ 0.6
LINC00461-215	ENST00000513893	SUPT20HL2	P0C7V6	817 aa		18.82	■□□□□ 0.6
LINC00461-215	ENST00000513893	AR	P10275	920 aa		18.82	■□□□□ 0.6
LINC00461-215	ENST00000513893	PBX2	P40425	430 aa		18.82	■□□□□ 0.6
LINC00461-215	ENST00000513893	NEDD9	Q14511	834 aa		18.82	■□□□□ 0.6
LINC00461-215	ENST00000513893	METTL7B	Q6UX53	244 aa		18.82	■□□□□ 0.6
LINC00461-215	ENST00000513893	SEZ6L	Q9BYH1	1024 aa		18.82	■□□□□ 0.6
LINC00461-215	ENST00000513893	VPS54	Q9P1Q0	977 aa		18.82	■□□□□ 0.6
LINC00461-215	ENST00000513893	CCDC196	A0A1B0GTZ2	297 aa		18.81	■□□□□ 0.6
LINC00461-215	ENST00000513893	EPB41L2	O43491	1005 aa	Known RBP	18.81	■□□□□ 0.6
LINC00461-215	ENST00000513893	PPFIA4	O75335	1185 aa		18.81	■□□□□ 0.6
LINC00461-215	ENST00000513893	CLK2	P49760	499 aa	Known RBP	18.81	■□□□□ 0.6
LINC00461-215	ENST00000513893	EVC	P57679	992 aa		18.81	■□□□□ 0.6
LINC00461-215	ENST00000513893	PTPN11	Q06124	597 aa	Predicted RBP	18.81	■□□□□ 0.6
LINC00461-215	ENST00000513893	MTMR1	Q13613	665 aa		18.81	■□□□□ 0.6
LINC00461-215	ENST00000513893	AIFM3	Q96NN9	605 aa		18.81	■□□□□ 0.6
LINC00461-215	ENST00000513893	TM6SF1	Q9BZW5	370 aa		18.81	■□□□□ 0.6
LINC00461-215	ENST00000513893	JADE2	Q9NQC1	790 aa		18.81	■□□□□ 0.6
LINC00461-215	ENST00000513893	MTMR10	Q9NXD2	777 aa		18.81	■□□□□ 0.6
LINC00461-215	ENST00000513893	DOCK5	Q9H7D0	1870 aa		18.8	■□□□□ 0.6
LINC00461-215	ENST00000513893	FGB	P02675	491 aa		18.8	■□□□□ 0.6
LINC00461-215	ENST00000513893	IQCF3	P0C7M6	154 aa		18.8	■□□□□ 0.6
LINC00461-215	ENST00000513893	XRRA1	Q6P2D8	792 aa		18.8	■□□□□ 0.6
LINC00461-215	ENST00000513893	PSRC1	Q6PGN9	363 aa	Predicted RBP	18.8	■□□□□ 0.6
LINC00461-215	ENST00000513893	SESTD1	Q86VW0	696 aa		18.8	■□□□□ 0.6
LINC00461-215	ENST00000513893	GPRASP2	Q96D09	838 aa		18.8	■□□□□ 0.6
LINC00461-215	ENST00000513893	GUCD1	Q96NT3	240 aa		18.8	■□□□□ 0.6
LINC00461-215	ENST00000513893	MXRA8	Q9BRK3	442 aa		18.8	■□□□□ 0.6
LINC00461-215	ENST00000513893	TTYH1	Q9H313	450 aa	Predicted RBP	18.8	■□□□□ 0.6
LINC00461-215	ENST00000513893	MYH7B	A7E2Y1	1941 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	GSTTP1	A0A1W2PQM5	241 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893		H3BRB1	525 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	hCG_1984214	I3L0E3	225 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	SMIM10L2A	P0DMW4	78 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	SMIM10L2B	P0DMW5	78 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	IFNAR1	P17181	557 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	GPNMB	Q14956	572 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	TCTN1	Q2MV58	587 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	RASIP1	Q5U651	963 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	ZNF713	Q8N859	430 aa	Predicted RBP	18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	KATNAL1	Q9BW62	490 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	TUT1	Q9H6E5	874 aa	Known RBP	18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	KCNH7	Q9NS40	1196 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	TPCN1	Q9ULQ1	816 aa		18.79	■□□□□ 0.6
LINC00461-215	ENST00000513893	ZBBX	A8MT70	800 aa		18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	DDX39A	O00148	427 aa	Known RBP	18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	MARK3	P27448	753 aa		18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	TCF7	P36402	384 aa	Predicted RBP	18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	SMAD3	P84022	425 aa	Known RBP	18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	ARHGAP4	P98171	946 aa		18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	AKAP17A	Q02040	695 aa	Known RBP	18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	ITGB3BP	Q13352	177 aa	Predicted RBP	18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	TRIM71	Q2Q1W2	868 aa	Known RBP	18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	RETREG2	Q8NC44	543 aa		18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	HERVK_113	Q902F9	699 aa		18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	ZBTB10	Q96DT7	871 aa		18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	SENP7	Q9BQF6	1050 aa		18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	RNF26	Q9BY78	433 aa	Predicted RBP	18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	ZMYND12	Q9H0C1	365 aa		18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	SETD4	Q9NVD3	440 aa		18.78	■□□□□ 0.6
LINC00461-215	ENST00000513893	FAM86B1	E9PN63	330 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	TREH	O43280	583 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	LARGE1	O95461	756 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	FAM86B2	P0C5J1	330 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	SREBF1	P36956	1147 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	RABGGTB	P53611	331 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	AK2	P54819	239 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	SCRN1	Q12765	414 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	ZNF697	Q5TEC3	545 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	GPR153	Q6NV75	609 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	PBX4	Q9BYU1	374 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	OSBPL7	Q9BZF2	842 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	RNPEP	Q9H4A4	650 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	EHMT1	Q9H9B1	1298 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	C6orf50	Q9HD87	102 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	SCN5A	Q14524	2016 aa		18.77	■□□□□ 0.6
LINC00461-215	ENST00000513893	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	C17orf102	A2RUQ5	167 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	FOS	P01100	380 aa	Predicted RBP	18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	CKB	P12277	381 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	MYOG	P15173	224 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	DNAJB2	P25686	324 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	ZNF76	P36508	570 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	SSRP1	Q08945	709 aa	Known RBP	18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	AP3B2	Q13367	1082 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	BFSP2	Q13515	415 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	CEP55	Q53EZ4	464 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	ZNF618	Q5T7W0	954 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	TRAF7	Q6Q0C0	670 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	ZNF274	Q96GC6	653 aa	Predicted RBP	18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	PCYT2	Q99447	389 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	SEMA6B	Q9H3T3	888 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	AGO4	Q9HCK5	861 aa	Known RBP	18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	GJB4	Q9NTQ9	266 aa		18.76	■□□□□ 0.59
LINC00461-215	ENST00000513893	ESYT2	A0FGR8	921 aa		18.75	■□□□□ 0.59
LINC00461-215	ENST00000513893	PITPNM1	O00562	1244 aa		18.75	■□□□□ 0.59
LINC00461-215	ENST00000513893	CPLX1	O14810	134 aa		18.75	■□□□□ 0.59
LINC00461-215	ENST00000513893	EDIL3	O43854	480 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms