RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 HYAL1Q12794 435 aa10.56□□□□□ -0.72
CAST-239ENST00000513666 SUGP1Q8IWZ8 645 aaKnown RBP10.56□□□□□ -0.72
CAST-239ENST00000513666 SEC62Q99442 399 aaKnown RBP10.56□□□□□ -0.72
CAST-239ENST00000513666 MAF1Q9H063 256 aa10.56□□□□□ -0.72
CAST-239ENST00000513666 LMAN2LQ9H0V9 348 aa10.56□□□□□ -0.72
CAST-239ENST00000513666 INCENPQ9NQS7 918 aa10.56□□□□□ -0.72
CAST-239ENST00000513666 DDX19BQ9UMR2 479 aa10.56□□□□□ -0.72
CAST-239ENST00000513666 C5orf67F2Z3F1 127 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 CCER2I3L3R5 266 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 RANBP6O60518 1105 aaKnown RBP10.55□□□□□ -0.72
CAST-239ENST00000513666 UPP2O95045 317 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 RB1P06400 928 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 ZNF286BP0CG31 522 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 TOP1P11387 765 aaKnown RBP10.55□□□□□ -0.72
CAST-239ENST00000513666 MS4A1P11836 297 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 THPOP40225 353 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 HIC1Q14526 733 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 SERINC5Q86VE9 423 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 FBXL6Q8N531 539 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 PPTC7Q8NI37 304 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 SEPT8Q92599 483 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 TMEM47Q9BQJ4 181 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 ALG13Q9NP73 1137 aaKnown RBP10.55□□□□□ -0.72
CAST-239ENST00000513666 CD207Q9UJ71 328 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 DDX41Q9UJV9 622 aaKnown RBP10.55□□□□□ -0.72
CAST-239ENST00000513666 CACNA1AO00555 2505 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 MYH7BA7E2Y1 1941 aa10.55□□□□□ -0.72
CAST-239ENST00000513666 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.54□□□□□ -0.72
CAST-239ENST00000513666 FOXP2O15409 715 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 ORC4O43929 436 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 TBX10O75333 385 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 PDHBP11177 359 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 HOXD8P13378 290 aaPredicted RBP10.54□□□□□ -0.72
CAST-239ENST00000513666 CTNNB1P35222 781 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 ZXDAP98168 799 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 LAMC2Q13753 1193 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 STXBP2Q15833 593 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 TSHZ3Q63HK5 1081 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 DHX37Q8IY37 1157 aaKnown RBP10.54□□□□□ -0.72
CAST-239ENST00000513666 SYTL5Q8TDW5 730 aaPredicted RBP10.54□□□□□ -0.72
CAST-239ENST00000513666 NSUN6Q8TEA1 469 aaKnown RBP10.54□□□□□ -0.72
CAST-239ENST00000513666 GPATCH3Q96I76 525 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 TAAR1Q96RJ0 339 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 IWS1Q96ST2 819 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 C11orf84Q9BUA3 381 aaPredicted RBP10.54□□□□□ -0.72
CAST-239ENST00000513666 IFIH1Q9BYX4 1025 aaKnown RBP10.54□□□□□ -0.72
CAST-239ENST00000513666 ANAPC4Q9UJX5 808 aa10.54□□□□□ -0.72
CAST-239ENST00000513666 C2orf72A6NCS6 295 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 GRM6O15303 877 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 FGRP09769 529 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 LINC00271P0C7V0 271 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 GTF2F1P35269 517 aaKnown RBP eCLIP10.53□□□□□ -0.72
CAST-239ENST00000513666 BMPR1AP36894 532 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 ZNF543Q08ER8 600 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 USH1GQ495M9 461 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 ZMYM1Q5SVZ6 1142 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 FIBCD1Q8N539 461 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 TBC1D5Q92609 795 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 IL17RAQ96F46 866 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 IRF2BPLQ9H1B7 796 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 FAM86C1Q9NVL1 165 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 COL20A1Q9P218 1284 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 RWDD3Q9Y3V2 267 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 LOC730098B7Z3J9 87 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 LINC01565O15544 149 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 CAND2O75155 1236 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 PPFIA4O75335 1185 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 EIF3JO75822 258 aaKnown RBP10.53□□□□□ -0.72
CAST-239ENST00000513666 EYA4O95677 639 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 SNHG28P0DPA3 235 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 HOXC8P31273 242 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 ADAM15Q13444 863 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 APBB2Q92870 758 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 MSLNLQ96KJ4 702 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 RMDN3Q96TC7 470 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 KRTAP3-3Q9BYR6 98 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 KRTAP3-2Q9BYR7 98 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 OSBPL7Q9BZF2 842 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 IGFLR1Q9H665 355 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 TCP11L1Q9NUJ3 509 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 MRVI1Q9Y6F6 885 aa10.53□□□□□ -0.72
CAST-239ENST00000513666 PLXNA3P51805 1871 aa10.52□□□□□ -0.72
CAST-239ENST00000513666 PTPRZ1P23471 2315 aaPredicted RBP10.52□□□□□ -0.72
CAST-239ENST00000513666 C17orf102A2RUQ5 167 aa10.52□□□□□ -0.73
CAST-239ENST00000513666 CBX2Q14781 532 aaPredicted RBP10.52□□□□□ -0.73
CAST-239ENST00000513666 ATOH1Q92858 354 aaPredicted RBP10.52□□□□□ -0.73
CAST-239ENST00000513666 CLP1Q92989 425 aaKnown RBP10.52□□□□□ -0.73
CAST-239ENST00000513666 ATP6V0A1Q93050 837 aa10.52□□□□□ -0.73
CAST-239ENST00000513666 CHMP4BQ9H444 224 aaKnown RBP10.52□□□□□ -0.73
CAST-239ENST00000513666 ABCB11O95342 1321 aa10.52□□□□□ -0.73
CAST-239ENST00000513666 MMP1P03956 469 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 NR3C2P08235 984 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 NDUFV1P49821 464 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 VCPP55072 806 aaKnown RBP10.51□□□□□ -0.73
CAST-239ENST00000513666 SIGLEC14Q08ET2 396 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 HSDL1Q3SXM5 330 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 GPATCH4Q5T3I0 446 aaKnown RBP10.51□□□□□ -0.73
CAST-239ENST00000513666 ARHGEF16Q5VV41 709 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 MYSM1Q5VVJ2 828 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 MCF2L2Q86YR7 1114 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms