RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 SMIM10L2AP0DMW4 78 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 SMIM10L2BP0DMW5 78 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 MFAP1P55081 439 aaKnown RBP11.21□□□□□ -0.61
TCOF1-212ENST00000513538 SEMA3FQ13275 785 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 EPC2Q52LR7 807 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-212ENST00000513538 GJD3Q8N144 294 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 NEK9Q8TD19 979 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 MRPL38Q96DV4 380 aaKnown RBP11.21□□□□□ -0.61
TCOF1-212ENST00000513538 DSCC1Q9BVC3 393 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 OSBPL3Q9H4L5 887 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 INSL6Q9Y581 213 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 PCDHA1Q9Y5I3 950 aa11.21□□□□□ -0.61
TCOF1-212ENST00000513538 KAT6AQ92794 2004 aa11.21□□□□□ -0.62
TCOF1-212ENST00000513538 KIAA1671Q9BY89 1806 aa11.21□□□□□ -0.62
TCOF1-212ENST00000513538 FRMPD4Q14CM0 1322 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 C17orf102A2RUQ5 167 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 GRXCR2A6NFK2 248 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 H3BQ06 376 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-212ENST00000513538 CYTH3O43739 400 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 IGHDP01880 384 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 AMHP03971 560 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 LINC00271P0C7V0 271 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 NT5C2P49902 561 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 MRPS9P82933 396 aaKnown RBP11.2□□□□□ -0.62
TCOF1-212ENST00000513538 COL19A1Q14993 1142 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 IFIT1BQ5T764 474 aaKnown RBP11.2□□□□□ -0.62
TCOF1-212ENST00000513538 FCHSD1Q86WN1 690 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 TRIM50Q86XT4 487 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 HOMER1Q86YM7 354 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 ATP6V0A1Q93050 837 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 PIGSQ96S52 555 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 UBAC1Q9BSL1 405 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 KRT23Q9C075 422 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 RNPEPQ9H4A4 650 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 DIAPH3Q9NSV4 1193 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 TAF6LQ9Y6J9 622 aa11.2□□□□□ -0.62
TCOF1-212ENST00000513538 H3BNC9 293 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 H3BRB1 525 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 UPP2O95045 317 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 CCND2P30279 289 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 NUCB1Q02818 461 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 GRM4Q14833 912 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 IMMTQ16891 758 aaKnown RBP11.19□□□□□ -0.62
TCOF1-212ENST00000513538 TCEAL5Q5H9L2 206 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 KCNV1Q6PIU1 500 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 CHD1LQ86WJ1 897 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 TMEM192Q8IY95 271 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 TOP1MTQ969P6 601 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 TUT1Q9H6E5 874 aaKnown RBP11.19□□□□□ -0.62
TCOF1-212ENST00000513538 RIOX1Q9H6W3 641 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 SUPT16HQ9Y5B9 1047 aaKnown RBP11.19□□□□□ -0.62
TCOF1-212ENST00000513538 LOXHD1Q8IVV2 1947 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 ZNF318Q5VUA4 2279 aa11.19□□□□□ -0.62
TCOF1-212ENST00000513538 TTC3P53804 2025 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-212ENST00000513538 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 TGFB3P10600 412 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-212ENST00000513538 LTBRP36941 435 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 ADAM17P78536 824 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 GPM6BQ13491 265 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 TIGD5Q53EQ6 642 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 BANK1Q8NDB2 785 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 LMBR1Q8WVP7 490 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 SEPT8Q92599 483 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 INPP4AQ96PE3 977 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-212ENST00000513538 GPR20Q99678 358 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 CNNM2Q9H8M5 875 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 MLXIPQ9HAP2 919 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 SETD4Q9NVD3 440 aa11.18□□□□□ -0.62
TCOF1-212ENST00000513538 MAP3K20Q9NYL2 800 aaKnown RBP11.18□□□□□ -0.62
TCOF1-212ENST00000513538 PRR33A8MZF0 331 aa11.17□□□□□ -0.62
TCOF1-212ENST00000513538 SPATA31C2B4DYI2 1134 aa11.17□□□□□ -0.62
TCOF1-212ENST00000513538 ICAM3P32942 547 aa11.17□□□□□ -0.62
TCOF1-212ENST00000513538 ZP2Q05996 745 aa11.17□□□□□ -0.62
TCOF1-212ENST00000513538 FAM26DQ5JW98 314 aa11.17□□□□□ -0.62
TCOF1-212ENST00000513538 METTL7BQ6UX53 244 aa11.17□□□□□ -0.62
TCOF1-212ENST00000513538 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
TCOF1-212ENST00000513538 SAMD3Q8N6K7 520 aa11.17□□□□□ -0.62
TCOF1-212ENST00000513538 PABPC5Q96DU9 382 aaKnown RBP11.17□□□□□ -0.62
TCOF1-212ENST00000513538 SAMD11Q96NU1 681 aa11.17□□□□□ -0.62
TCOF1-212ENST00000513538 YME1L1Q96TA2 773 aa11.17□□□□□ -0.62
TCOF1-212ENST00000513538 IFIH1Q9BYX4 1025 aaKnown RBP11.17□□□□□ -0.62
TCOF1-212ENST00000513538 RC3H2Q9HBD1 1191 aaKnown RBP11.17□□□□□ -0.62
TCOF1-212ENST00000513538 PIEZO1Q92508 2521 aa11.17□□□□□ -0.62
TCOF1-212ENST00000513538 CAND2O75155 1236 aa11.16□□□□□ -0.62
TCOF1-212ENST00000513538 CHRNA1P02708 482 aa11.16□□□□□ -0.62
TCOF1-212ENST00000513538 CYP21A2P08686 494 aa11.16□□□□□ -0.62
TCOF1-212ENST00000513538 DLX2Q07687 328 aaPredicted RBP11.16□□□□□ -0.62
TCOF1-212ENST00000513538 TROAPQ12815 778 aa11.16□□□□□ -0.62
TCOF1-212ENST00000513538 PTPROQ16827 1216 aa11.16□□□□□ -0.62
TCOF1-212ENST00000513538 UTP14CQ5TAP6 766 aaKnown RBP11.16□□□□□ -0.62
TCOF1-212ENST00000513538 RUFY4Q6ZNE9 571 aa11.16□□□□□ -0.62
TCOF1-212ENST00000513538 NSUN3Q9H649 340 aaKnown RBP11.16□□□□□ -0.62
TCOF1-212ENST00000513538 RTEL1Q9NZ71 1219 aa11.16□□□□□ -0.62
TCOF1-212ENST00000513538 CTNNA3Q9UI47 895 aa11.16□□□□□ -0.62
TCOF1-212ENST00000513538 TECTAO75443 2155 aa11.16□□□□□ -0.62
TCOF1-212ENST00000513538 PNMA6FA0A0J9YX94 578 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms