RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 RPF1Q9H9Y2 349 aaKnown RBP17.46■□□□□ 0.39
TRIO-221ENST00000513206 TLR7Q9NYK1 1049 aaKnown RBP17.46■□□□□ 0.39
TRIO-221ENST00000513206 GCNT4Q9P109 453 aa17.46■□□□□ 0.39
TRIO-221ENST00000513206 FAM81BQ96LP2 452 aa17.46■□□□□ 0.39
TRIO-221ENST00000513206 E9PCH4 1651 aa17.46■□□□□ 0.38
TRIO-221ENST00000513206 CLTAP09496 248 aa17.46■□□□□ 0.38
TRIO-221ENST00000513206 GARSP41250 739 aaKnown RBP17.46■□□□□ 0.38
TRIO-221ENST00000513206 C1orf228Q6PIY5 440 aa17.46■□□□□ 0.38
TRIO-221ENST00000513206 ELMSAN1Q6PJG2 1045 aa17.46■□□□□ 0.38
TRIO-221ENST00000513206 RNF139Q8WU17 664 aa17.46■□□□□ 0.38
TRIO-221ENST00000513206 MYH7P12883 1935 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 S100BP04271 92 aaPredicted RBP17.45■□□□□ 0.38
TRIO-221ENST00000513206 MESDQ14696 234 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 TSPYL2Q9H2G4 693 aaPredicted RBP17.45■□□□□ 0.38
TRIO-221ENST00000513206 SLC8A2Q9UPR5 921 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 PPFIA2O75334 1257 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 STX2P32856 288 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 STAG1Q8WVM7 1258 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 PDE11AQ9HCR9 933 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 NXF1Q9UBU9 619 aaKnown RBP17.45■□□□□ 0.38
TRIO-221ENST00000513206 STK38LQ9Y2H1 464 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 ZNF827Q17R98 1081 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 SAAL1Q96ER3 474 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 BSDC1Q9NW68 430 aaPredicted RBP17.45■□□□□ 0.38
TRIO-221ENST00000513206 ABCC12Q96J65 1359 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 ROBO2Q9HCK4 1378 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 TROVE2P10155 538 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRIO-221ENST00000513206 GNAT1P11488 350 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 HOXA13P31271 388 aaPredicted RBP17.45■□□□□ 0.38
TRIO-221ENST00000513206 TUBGCP2Q9BSJ2 902 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 TMEM206Q9H813 350 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 FANCLQ9NW38 375 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 ANKRD42Q8N9B4 389 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 CDKL2Q92772 493 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 RPGRIP1Q96KN7 1286 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 DESI2Q9BSY9 194 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 SLC24A3Q9HC58 644 aa17.45■□□□□ 0.38
TRIO-221ENST00000513206 GOLGA8KD6RF30 607 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 MYL3P08590 195 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 COG7P83436 770 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 FBXO18Q8NFZ0 1043 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 SH3GL3Q99963 347 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 PCIF1Q9H4Z3 704 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 USH1CQ9Y6N9 552 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 RNF17Q9BXT8 1623 aaKnown RBP17.44■□□□□ 0.38
TRIO-221ENST00000513206 EIF3CLB5ME19 914 aaKnown RBP17.44■□□□□ 0.38
TRIO-221ENST00000513206 CLIC2O15247 247 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 COBLO75128 1261 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 TRAPPC10P48553 1259 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 RFX6Q8HWS3 928 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 ARMC2Q8NEN0 867 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 EIF3CQ99613 913 aaKnown RBP17.44■□□□□ 0.38
TRIO-221ENST00000513206 SLITRK6Q9H5Y7 841 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 AFDNP55196 1824 aaKnown RBP17.44■□□□□ 0.38
TRIO-221ENST00000513206 PRAMEF22A3QJZ6 481 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 ATG3Q9NT62 314 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 ERBB3P21860 1342 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 CDK8P49336 464 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 KCTD6Q8NC69 237 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 IFT122Q9HBG6 1241 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 FER1L4A9Z1Z3 1794 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 SPATA1Q5VX52 437 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 SUFUQ9UMX1 484 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 MAGED2Q9UNF1 606 aaPredicted RBP17.44■□□□□ 0.38
TRIO-221ENST00000513206 MYH11P35749 1972 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 CHD4Q14839 1912 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 SPDYE2BA6NHP3 402 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 SPDYE6P0CI01 402 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 DDIT3P35638 169 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 APOA5Q6Q788 366 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 RNF207Q6ZRF8 634 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 LRRC8AQ8IWT6 810 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 WHAMMQ8TF30 809 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 PCDHA7Q9UN72 937 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 POLIQ9UNA4 740 aa17.44■□□□□ 0.38
TRIO-221ENST00000513206 K7ERI5 159 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 TXNDC9O14530 226 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 MAPK4P31152 587 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 RASSF7Q02833 373 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 LCORLQ8N3X6 602 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 TAB3Q8N5C8 712 aaPredicted RBP17.43■□□□□ 0.38
TRIO-221ENST00000513206 HDAC11Q96DB2 347 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 PPFIA4O75335 1185 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 FAM160B2Q86V87 743 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 KRT33BQ14525 404 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 FAM186BQ8IYM0 893 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 CHMP6Q96FZ7 201 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 ZSWIM5Q9P217 1185 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 MCF2LO15068 1137 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 KRT3P12035 628 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 LMNB2Q03252 620 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 GDAP1L1Q96MZ0 367 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 GPR101Q96P66 508 aaPredicted RBP17.43■□□□□ 0.38
TRIO-221ENST00000513206 CITO14578 2027 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 PNMA6FA0A0J9YX94 578 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 RC3H1Q5TC82 1133 aaKnown RBP17.43■□□□□ 0.38
TRIO-221ENST00000513206 GIMAP8Q8ND71 665 aaPredicted RBP17.43■□□□□ 0.38
TRIO-221ENST00000513206 CCNYQ8ND76 341 aa17.43■□□□□ 0.38
TRIO-221ENST00000513206 GPR108Q9NPR9 543 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms