RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
CLCN3-208ENST00000512813 UBE3AQ05086 875 aa11.22□□□□□ -0.61
CLCN3-208ENST00000512813 RING1Q06587 406 aa11.22□□□□□ -0.61
CLCN3-208ENST00000512813 TDGQ13569 410 aa11.22□□□□□ -0.61
CLCN3-208ENST00000512813 MFSD10Q14728 455 aa11.22□□□□□ -0.61
CLCN3-208ENST00000512813 NSMFQ6X4W1 530 aa11.22□□□□□ -0.61
CLCN3-208ENST00000512813 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
CLCN3-208ENST00000512813 DDX1Q92499 740 aaKnown RBP11.22□□□□□ -0.61
CLCN3-208ENST00000512813 ALG1Q9BT22 464 aa11.22□□□□□ -0.61
CLCN3-208ENST00000512813 USTQ9Y2C2 406 aa11.22□□□□□ -0.61
CLCN3-208ENST00000512813 TTC3P53804 2025 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 LOC400499M0QZD8 3231 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 SRGAP3O43295 1099 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 CAND2O75155 1236 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 DGKIO75912 1065 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 ITIH3Q06033 890 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 ARHGAP1Q07960 439 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 MTX1Q13505 466 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 HIC1Q14526 733 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 KIAA0753Q2KHM9 967 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 ZNF528Q3MIS6 628 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 TPRNQ4KMQ1 711 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 C12orf60Q5U649 245 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 CES5AQ6NT32 575 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 CMTR2Q8IYT2 770 aaKnown RBP11.21□□□□□ -0.61
CLCN3-208ENST00000512813 MICAL1Q8TDZ2 1067 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 EPC1Q9H2F5 836 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 ADAM7Q9H2U9 754 aa11.21□□□□□ -0.61
CLCN3-208ENST00000512813 BAZ2AQ9UIF9 1905 aaKnown RBP11.21□□□□□ -0.62
CLCN3-208ENST00000512813 MYH4Q9Y623 1939 aa11.21□□□□□ -0.62
CLCN3-208ENST00000512813 C1QTNF9BB2RNN3 333 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 C1QTNF9P0C862 333 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 EDNRBP24530 442 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 MTHFRP42898 656 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 PDE4DQ08499 809 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 DGKDQ16760 1214 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 TNNI3KQ59H18 835 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 N4BP2L1Q5TBK1 243 aaPredicted RBP11.2□□□□□ -0.62
CLCN3-208ENST00000512813 PDE12Q6L8Q7 609 aaKnown RBP11.2□□□□□ -0.62
CLCN3-208ENST00000512813 CCDC62Q6P9F0 684 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 MAML2Q8IZL2 1156 aaPredicted RBP11.2□□□□□ -0.62
CLCN3-208ENST00000512813 CYP26B1Q9NR63 512 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 PCDHGA2Q9Y5H1 932 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 FPGT-TNNI3KV9GXZ4 949 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 DENND4AQ7Z401 1863 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 COL4A3Q01955 1670 aa11.2□□□□□ -0.62
CLCN3-208ENST00000512813 CYP2D7A0A087X1C5 515 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 KRBA1A5PL33 1030 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 POTEMA6NI47 508 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 CYSRT1A8MQ03 144 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 STK25O00506 426 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 FSCN2O14926 492 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 GH1P01241 217 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 KCNA4P22459 653 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 RFX1P22670 979 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 STAT2P52630 851 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 BAATQ14032 418 aaPredicted RBP11.19□□□□□ -0.62
CLCN3-208ENST00000512813 SPECC1Q5M775 1068 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 POTEGQ6S5H5 508 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 DHX37Q8IY37 1157 aaKnown RBP11.19□□□□□ -0.62
CLCN3-208ENST00000512813 TBC1D17Q9HA65 648 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 WNT16Q9UBV4 365 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 SYNPO2Q9UMS6 1093 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.19□□□□□ -0.62
CLCN3-208ENST00000512813 DMXL2Q8TDJ6 3036 aa11.19□□□□□ -0.62
CLCN3-208ENST00000512813 MYH7BA7E2Y1 1941 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.18□□□□□ -0.62
CLCN3-208ENST00000512813 TMEM8BA6NDV4 472 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 SRRM3A6NNA2 597 aaPredicted RBP11.18□□□□□ -0.62
CLCN3-208ENST00000512813 EOMESO95936 686 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 DCNP07585 359 aaKnown RBP11.18□□□□□ -0.62
CLCN3-208ENST00000512813 CTSHP09668 335 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 ZNF286BP0CG31 522 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 LLGL2Q6P1M3 1020 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 FAM160B2Q86V87 743 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 LCORLQ8N3X6 602 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 ZBTB44Q8NCP5 570 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 GMCL1P1Q8NEA9 526 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 CASP10Q92851 521 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 MPHOSPH6Q99547 160 aaKnown RBP11.18□□□□□ -0.62
CLCN3-208ENST00000512813 ATP8A2Q9NTI2 1148 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 GMEB2Q9UKD1 530 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 FBXO4Q9UKT5 387 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 AKAP13Q12802 2813 aa11.18□□□□□ -0.62
CLCN3-208ENST00000512813 WDFY3Q8IZQ1 3526 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 TMEM232C9JQI7 657 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 TBC1D4O60343 1298 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 LILRB5O75023 590 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 BMP3P12645 472 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 HOXC8P31273 242 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 ERVFC1P60507 584 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 SOWAHCQ53LP3 525 aaPredicted RBP11.17□□□□□ -0.62
CLCN3-208ENST00000512813 KIAA1841Q6NSI8 718 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 PHLDB3Q6NSJ2 640 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 LURAP1LQ8IV03 231 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 AMOTL1Q8IY63 956 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 ANTXR1Q9H6X2 564 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 CCPG1Q9ULG6 757 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 SIT1Q9Y3P8 196 aa11.17□□□□□ -0.62
CLCN3-208ENST00000512813 TENM4Q6N022 2769 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms