RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 FSD1LQ9BXM9 530 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 HELLSQ9NRZ9 838 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 FBXO40Q9UH90 709 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 DPP7Q9UHL4 492 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 CUX1P39880 1505 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 LIG3P49916 1009 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 KLHL30Q0D2K2 578 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 PDCLQ13371 301 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 SNX17Q15036 470 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 CYP4A22Q5TCH4 519 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 KRT39Q6A163 491 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 GLYCTKQ8IVS8 523 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 MFN1Q8IWA4 741 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 LMNTD2Q8IXW0 634 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 U2AF1L4Q8WU68 220 aaKnown RBP9.63□□□□□ -0.87
VCAN-208ENST00000512590 ANKRD49Q8WVL7 239 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 LARSQ9P2J5 1176 aaKnown RBP9.63□□□□□ -0.87
VCAN-208ENST00000512590 TJP2Q9UDY2 1190 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 PPIEQ9UNP9 301 aaKnown RBP9.63□□□□□ -0.87
VCAN-208ENST00000512590 ERBB3P21860 1342 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 ARHGEF10O15013 1369 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 GSNP06396 782 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 NCALDP61601 193 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 PTK2Q05397 1052 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 AP1B1Q10567 949 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 FAM47AQ5JRC9 791 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 USPL1Q5W0Q7 1092 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 NBPF15Q8N660 670 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.63□□□□□ -0.87
VCAN-208ENST00000512590 PGBD4Q96DM1 585 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 CALCOCO1Q9P1Z2 691 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 PCDHGB4Q9UN71 923 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 ARHGAP26Q9UNA1 814 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 ADGRL1O94910 1474 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 GCP02774 474 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 MECOMQ03112 1051 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 MIIPQ5JXC2 388 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 RCSD1Q6JBY9 416 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 FAM47EQ6ZV65 393 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 NANOGNBQ7Z5D8 188 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 RNF180Q86T96 592 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 ARHGAP18Q8N392 663 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 HTATIP2Q9BUP3 242 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 ANLNQ9NQW6 1124 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 HOXC10Q9NYD6 342 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 VPS18Q9P253 973 aa9.63□□□□□ -0.87
VCAN-208ENST00000512590 PPIP5K1Q6PFW1 1433 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 CCDC151A5D8V7 595 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 GOLGA8SH3BPF8 625 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 GNA14O95837 355 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 HPDP32754 393 aaPredicted RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 FLOT2Q14254 428 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 GIMAP8Q8ND71 665 aaPredicted RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 BEST2Q8NFU1 509 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 SCFD1Q8WVM8 642 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 LPIN2Q92539 896 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 KDM4CQ9H3R0 1056 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 DDX21Q9NR30 783 aaKnown RBP eCLIP9.62□□□□□ -0.87
VCAN-208ENST00000512590 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 RBM8AQ9Y5S9 174 aaKnown RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 LRRC14BA6NHZ5 514 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 FYNP06241 537 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 TAC1P20366 129 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 NUP62P37198 522 aaPredicted RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 TNFAIP2Q03169 654 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 LONRF2Q1L5Z9 754 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 SLC45A4Q5BKX6 768 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 TTC38Q5R3I4 469 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 PLEKHM3Q6ZWE6 761 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 ZSCAN30Q86W11 494 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 STKLD1Q8NE28 680 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 EIF3CQ99613 913 aaKnown RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 DHX36Q9H2U1 1008 aaKnown RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 EHD2Q9NZN4 543 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 C9orf84Q5VXU9 1444 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 USP17L3A6NCW0 530 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 USP17L4A6NCW7 530 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 GDF11O95390 407 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 IMPDH2P12268 514 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 SFMBT2Q5VUG0 894 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 USP17L1Q7RTZ2 530 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 TRIM42Q8IWZ5 723 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 C1orf131Q8NDD1 294 aaKnown RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 COBLO75128 1261 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 PPP6R2O75170 966 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 STAG3L1P0CL83 205 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 GTF2E2P29084 291 aaKnown RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 MRPS15P82914 257 aaKnown RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 HPCAP84074 193 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 NMIQ13287 307 aaPredicted RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 ZNF568Q3ZCX4 644 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 PEX26Q7Z412 305 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 VPS39Q96JC1 886 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 WRNIP1Q96S55 665 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 SAE1Q9UBE0 346 aaPredicted RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 PPARGC1AQ9UBK2 798 aaKnown RBP9.62□□□□□ -0.87
VCAN-208ENST00000512590 FBXO10Q9UK96 956 aa9.62□□□□□ -0.87
VCAN-208ENST00000512590 NFU1Q9UMS0 254 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms