RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 MEIS2O14770 477 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 ARHGEF15O94989 841 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 HOXC8P31273 242 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 LIFRP42702 1097 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 DEFB103AP81534 67 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 MRPS5P82675 430 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 SEMA3FQ13275 785 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 PCNX4Q63HM2 1172 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 ARNTL2Q8WYA1 636 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 USP26Q9BXU7 913 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 RTEL1Q9NZ71 1219 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 MTCH2Q9Y6C9 303 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 EPOPA6NHQ4 379 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 RFXAPO00287 272 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 SLC27A2O14975 620 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 PLEKHA8P1O95397 391 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 SMIM10L2AP0DMW4 78 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 SMIM10L2BP0DMW5 78 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 THPOP40225 353 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 IKBKEQ14164 716 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 MBTPS1Q14703 1052 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 USP17L6PQ6QN14 398 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 CYFIP1Q7L576 1253 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 SRBD1Q8N5C6 995 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 ATP6V0A1Q93050 837 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 GPR20Q99678 358 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 ZBED2Q9BTP6 218 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 BCAS3Q9H6U6 928 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 ANO2Q9NQ90 1003 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 LGR5O75473 907 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 GJB5O95377 273 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 NECTIN1Q15223 517 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 TCTN1Q2MV58 587 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 CREB3L3Q68CJ9 461 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 TMCO2Q7Z6W1 182 aaPredicted RBP16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 NLRX1Q86UT6 975 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 IL27Q8NEV9 243 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 SENP7Q9BQF6 1050 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 ZNF215Q9UL58 517 aaPredicted RBP16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 SLC12A7Q9Y666 1083 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 PRRC2BQ5JSZ5 2229 aaKnown RBP16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 LCHNA4D1U4 455 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 RSPH10B2B2RC85 870 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 TNFRSF10AO00220 468 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 CAND2O75155 1236 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 RSPH10BP0C881 870 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 RXRAP19793 462 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 COL9A3Q14050 684 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 CMTR1Q8N1G2 835 aaKnown RBP16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 GIMAP8Q8ND71 665 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 CDHR1Q96JP9 859 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 RAD9AQ99638 391 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 RNPEPQ9H4A4 650 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 PSTPIP2Q9H939 334 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 DOCK5Q9H7D0 1870 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 COL4A4P53420 1690 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 TREHO43280 583 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 GNAT1P11488 350 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 SKIV2LQ15477 1246 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 AAK1Q2M2I8 961 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 RNF20Q5VTR2 975 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 TMTC3Q6ZXV5 915 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 TRIM50Q86XT4 487 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 ADAMTS19Q8TE59 1207 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 GPRASP2Q96D09 838 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 SP4Q02446 784 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 GRB10Q13322 594 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 MKRN4PQ13434 485 aaPredicted RBP16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 PLEKHG4Q58EX7 1191 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 SPRED2Q7Z698 418 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 SGMS1Q86VZ5 419 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 MICU3Q86XE3 530 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 FANCBQ8NB91 859 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 DBF4BQ8NFT6 615 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 LRRC2Q9BYS8 371 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 SETD4Q9NVD3 440 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 MICAL3Q7RTP6 2002 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 SPDYE3A6NKU9 549 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 LPXNO60711 386 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 AMHP03971 560 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 UTP14CQ5TAP6 766 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 KRT40Q6A162 431 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 RAB11FIP4Q86YS3 637 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 CCDC82Q8N4S0 544 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 UHRF1Q96T88 793 aaPredicted RBP16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 TELO2Q9Y4R8 837 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 hCG_1642624A0A1W2PR95 340 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 LINC01553A4QN01 128 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 CTSHP09668 335 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 KCNA2P16389 499 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 ITGB5P18084 799 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 ADAM17P78536 824 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 ARHGAP4P98171 946 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 TFF2Q03403 129 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 MTMR1Q13613 665 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 UBE2SQ16763 222 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 FAM117BQ6P1L5 589 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 SYNE3Q6ZMZ3 975 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms