RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 MEIS2O14770 477 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 ARHGEF15O94989 841 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 HOXC8P31273 242 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 LIFRP42702 1097 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 DEFB103AP81534 67 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 MRPS5P82675 430 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 SEMA3FQ13275 785 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 PCNX4Q63HM2 1172 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 ARNTL2Q8WYA1 636 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 USP26Q9BXU7 913 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 RTEL1Q9NZ71 1219 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 MTCH2Q9Y6C9 303 aa16.95■□□□□ 0.3
CCHCR1-229ENST00000512418 EPOPA6NHQ4 379 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 RFXAPO00287 272 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 SLC27A2O14975 620 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 PLEKHA8P1O95397 391 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 SMIM10L2AP0DMW4 78 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 SMIM10L2BP0DMW5 78 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 THPOP40225 353 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 IKBKEQ14164 716 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 MBTPS1Q14703 1052 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 USP17L6PQ6QN14 398 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 CYFIP1Q7L576 1253 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 SRBD1Q8N5C6 995 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 ATP6V0A1Q93050 837 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 GPR20Q99678 358 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 ZBED2Q9BTP6 218 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 BCAS3Q9H6U6 928 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 ANO2Q9NQ90 1003 aa16.94■□□□□ 0.3
CCHCR1-229ENST00000512418 LGR5O75473 907 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 GJB5O95377 273 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 NECTIN1Q15223 517 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 TCTN1Q2MV58 587 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 CREB3L3Q68CJ9 461 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 TMCO2Q7Z6W1 182 aaPredicted RBP16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 NLRX1Q86UT6 975 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 IL27Q8NEV9 243 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 SENP7Q9BQF6 1050 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 ZNF215Q9UL58 517 aaPredicted RBP16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 SLC12A7Q9Y666 1083 aa16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 PRRC2BQ5JSZ5 2229 aaKnown RBP16.93■□□□□ 0.3
CCHCR1-229ENST00000512418 LCHNA4D1U4 455 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 RSPH10B2B2RC85 870 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 TNFRSF10AO00220 468 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 CAND2O75155 1236 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 RSPH10BP0C881 870 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 RXRAP19793 462 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 COL9A3Q14050 684 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 CMTR1Q8N1G2 835 aaKnown RBP16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 GIMAP8Q8ND71 665 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 CDHR1Q96JP9 859 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 RAD9AQ99638 391 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 RNPEPQ9H4A4 650 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 PSTPIP2Q9H939 334 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 DOCK5Q9H7D0 1870 aa16.92■□□□□ 0.3
CCHCR1-229ENST00000512418 COL4A4P53420 1690 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 TREHO43280 583 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 GNAT1P11488 350 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 SKIV2LQ15477 1246 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 AAK1Q2M2I8 961 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 RNF20Q5VTR2 975 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 TMTC3Q6ZXV5 915 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 TRIM50Q86XT4 487 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 ADAMTS19Q8TE59 1207 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 GPRASP2Q96D09 838 aa16.91■□□□□ 0.3
CCHCR1-229ENST00000512418 SP4Q02446 784 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 GRB10Q13322 594 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 MKRN4PQ13434 485 aaPredicted RBP16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 PLEKHG4Q58EX7 1191 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 SPRED2Q7Z698 418 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 SGMS1Q86VZ5 419 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 MICU3Q86XE3 530 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 FANCBQ8NB91 859 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 DBF4BQ8NFT6 615 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 LRRC2Q9BYS8 371 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 SETD4Q9NVD3 440 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 MICAL3Q7RTP6 2002 aa16.9■□□□□ 0.3
CCHCR1-229ENST00000512418 SPDYE3A6NKU9 549 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 LPXNO60711 386 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 AMHP03971 560 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 UTP14CQ5TAP6 766 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 KRT40Q6A162 431 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 RAB11FIP4Q86YS3 637 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 CCDC82Q8N4S0 544 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 UHRF1Q96T88 793 aaPredicted RBP16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 TELO2Q9Y4R8 837 aa16.89■□□□□ 0.29
CCHCR1-229ENST00000512418 hCG_1642624A0A1W2PR95 340 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 LINC01553A4QN01 128 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 CTSHP09668 335 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 KCNA2P16389 499 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 ITGB5P18084 799 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 ADAM17P78536 824 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 ARHGAP4P98171 946 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 TFF2Q03403 129 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 MTMR1Q13613 665 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 UBE2SQ16763 222 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 FAM117BQ6P1L5 589 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 SYNE3Q6ZMZ3 975 aa16.88■□□□□ 0.29
CCHCR1-229ENST00000512418 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms