RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 VCPP55072 806 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 TROAPQ12815 778 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 GPNMBQ14956 572 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 PTPROQ16827 1216 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 LARP1BQ659C4 914 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 ATL3Q6DD88 541 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 CNKSR3Q6P9H4 555 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 SYNE3Q6ZMZ3 975 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 CHST3Q7LGC8 479 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 ASCL5Q7RTU5 278 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 ERMP1Q7Z2K6 904 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 RPAINQ86UA6 219 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 NEDD1Q8NHV4 660 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 PURBQ96QR8 312 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 LARP6Q9BRS8 491 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 MTG1Q9BT17 334 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 SLC38A10Q9HBR0 1119 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 A1CFQ9NQ94 594 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 TLR9Q9NR96 1032 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 FAM217BQ9NTX9 383 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 RBM28Q9NW13 759 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 COL4A6Q14031 1691 aa12.05□□□□□ -0.48
PDLIM5-217ENST00000512274 NLRC5Q86WI3 1866 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 ATG2AQ2TAZ0 1938 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 GREB1LQ9C091 1923 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 F5H6K3 240 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 STXBP3O00186 592 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 MBTPS2O43462 519 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 KRT37O76014 449 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 RGS20O76081 388 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 RASA1P20936 1047 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 LTBRP36941 435 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 ID4P47928 161 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 KLRC3Q07444 240 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 DLX2Q07687 328 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 GPM6BQ13491 265 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 SKOR2Q2VWA4 1001 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 TIGD5Q53EQ6 642 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 ZNF654Q8IZM8 581 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 FBXL6Q8N531 539 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 OR6J1Q8NGC5 347 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 ZSCAN16Q9H4T2 348 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 ACAD9Q9H845 621 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 ALG13Q9NP73 1137 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 RNF146Q9NTX7 359 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 ISY1Q9ULR0 285 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 SCN10AQ9Y5Y9 1956 aa12.04□□□□□ -0.48
PDLIM5-217ENST00000512274 LCTP09848 1927 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 CPLX1O14810 134 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 RANBP6O60518 1105 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 FDPSP14324 419 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 CPT1AP50416 773 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 SMAD2Q15796 467 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 PTGISQ16647 500 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 DUSP28Q4G0W2 176 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 EPC2Q52LR7 807 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 RCSD1Q6JBY9 416 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 NFRKBQ6P4R8 1299 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 WASF1Q92558 559 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 POP1Q99575 1024 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 RNF26Q9BY78 433 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 WDR11Q9BZH6 1224 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 NSUN3Q9H649 340 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 CLIP2Q9UDT6 1046 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 SYNPO2Q9UMS6 1093 aa12.03□□□□□ -0.48
PDLIM5-217ENST00000512274 IGKV6D-41A0A0C4DH26 115 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 GOLGA8AA7E2F4 631 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 JAK2O60674 1132 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 NBNO60934 754 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 CSPG5O95196 566 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 ALAS1P13196 640 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 SMARCA1P28370 1054 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 ZXDAP98168 799 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 STK3Q13188 491 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 RRP12Q5JTH9 1297 aaKnown RBP12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 IFIT1BQ5T764 474 aaKnown RBP12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 NFXL1Q6ZNB6 911 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 LRRC8DQ7L1W4 858 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 CATIPQ7Z7H3 387 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 ZNF444Q8N0Y2 327 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 FAM184AQ8NB25 1140 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 FANCBQ8NB91 859 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 AFAP1L1Q8TED9 768 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 TRERF1Q96PN7 1200 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 MKNK2Q9HBH9 465 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 TOMM22Q9NS69 142 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 TRPC6Q9Y210 931 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 INSL6Q9Y581 213 aa12.02□□□□□ -0.49
PDLIM5-217ENST00000512274 ABHD14A-ACY1A0A1B0GW23 586 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 H3BNC9 293 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 SELPP16109 830 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 CDC27P30260 824 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 AVPR2P30518 371 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 SNAP25P60880 206 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 TFAP4Q01664 338 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 FUT2Q10981 343 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms