RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 KIAA1671Q9BY89 1806 aa10.81□□□□□ -0.68
NUP54-211ENST00000512151 ADGRA3Q8IWK6 1321 aa10.81□□□□□ -0.68
NUP54-211ENST00000512151 F2P00734 622 aa10.8□□□□□ -0.68
NUP54-211ENST00000512151 CTSHP09668 335 aa10.8□□□□□ -0.68
NUP54-211ENST00000512151 ATF7P17544 494 aaPredicted RBP10.8□□□□□ -0.68
NUP54-211ENST00000512151 RPS6P62753 249 aaKnown RBP10.8□□□□□ -0.68
NUP54-211ENST00000512151 DGKDQ16760 1214 aa10.8□□□□□ -0.68
NUP54-211ENST00000512151 ASTLQ6HA08 431 aaPredicted RBP10.8□□□□□ -0.68
NUP54-211ENST00000512151 SEPT14Q6ZU15 432 aa10.8□□□□□ -0.68
NUP54-211ENST00000512151 SPPL3Q8TCT6 385 aa10.8□□□□□ -0.68
NUP54-211ENST00000512151 RHPN1Q8TCX5 695 aa10.8□□□□□ -0.68
NUP54-211ENST00000512151 RALYQ9UKM9 306 aaKnown RBP10.8□□□□□ -0.68
NUP54-211ENST00000512151 USP24Q9UPU5 2620 aa10.8□□□□□ -0.68
NUP54-211ENST00000512151 PUM1Q14671 1186 aaKnown RBP eCLIP10.79□□□□□ -0.68
NUP54-211ENST00000512151 RNF207Q6ZRF8 634 aa10.79□□□□□ -0.68
NUP54-211ENST00000512151 ZBTB33Q86T24 672 aa10.79□□□□□ -0.68
NUP54-211ENST00000512151 ATP8B4Q8TF62 1192 aa10.79□□□□□ -0.68
NUP54-211ENST00000512151 FRAT1Q92837 279 aaPredicted RBP10.79□□□□□ -0.68
NUP54-211ENST00000512151 ZNF689Q96CS4 500 aaPredicted RBP10.79□□□□□ -0.68
NUP54-211ENST00000512151 S1PR5Q9H228 398 aa10.79□□□□□ -0.68
NUP54-211ENST00000512151 CDH22Q9UJ99 828 aa10.79□□□□□ -0.68
NUP54-211ENST00000512151 MTMR7Q9Y216 660 aa10.79□□□□□ -0.68
NUP54-211ENST00000512151 MRPL42Q9Y6G3 142 aaKnown RBP10.79□□□□□ -0.68
NUP54-211ENST00000512151 GPR179Q6PRD1 2367 aa10.79□□□□□ -0.68
NUP54-211ENST00000512151 PER2O15055 1255 aa10.78□□□□□ -0.68
NUP54-211ENST00000512151 NMT2O60551 498 aa10.78□□□□□ -0.68
NUP54-211ENST00000512151 TFAP4Q01664 338 aa10.78□□□□□ -0.68
NUP54-211ENST00000512151 CWF19L1Q69YN2 538 aaKnown RBP10.78□□□□□ -0.68
NUP54-211ENST00000512151 CEP85Q6P2H3 762 aa10.78□□□□□ -0.68
NUP54-211ENST00000512151 ERC1Q8IUD2 1116 aa10.78□□□□□ -0.68
NUP54-211ENST00000512151 DNERQ8NFT8 737 aa10.78□□□□□ -0.68
NUP54-211ENST00000512151 PLVAPQ9BX97 442 aa10.78□□□□□ -0.68
NUP54-211ENST00000512151 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.78□□□□□ -0.68
NUP54-211ENST00000512151 DLL3Q9NYJ7 618 aa10.78□□□□□ -0.68
NUP54-211ENST00000512151 DDX41Q9UJV9 622 aaKnown RBP10.78□□□□□ -0.68
NUP54-211ENST00000512151 RWDD3Q9Y3V2 267 aa10.78□□□□□ -0.68
NUP54-211ENST00000512151 KIAA1217Q5T5P2 1943 aa10.78□□□□□ -0.68
NUP54-211ENST00000512151 CFAP47Q6ZTR5 3102 aa10.78□□□□□ -0.68
NUP54-211ENST00000512151 TREHO43280 583 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 PI15O43692 258 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 TSPY3P0CV98 308 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 TSPY8P0CW00 308 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 HOXD8P13378 290 aaPredicted RBP10.77□□□□□ -0.68
NUP54-211ENST00000512151 HOXC8P31273 242 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 BTG3Q14201 252 aaPredicted RBP10.77□□□□□ -0.68
NUP54-211ENST00000512151 SYDE2Q5VT97 1194 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 GIMAP6Q6P9H5 292 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 BTNL9Q6UXG8 535 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 DHX37Q8IY37 1157 aaKnown RBP10.77□□□□□ -0.68
NUP54-211ENST00000512151 KLHL23Q8NBE8 558 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 POF1BQ8WVV4 589 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 TBC1D5Q92609 795 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 P2RX5Q93086 422 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 HAUS7Q99871 368 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 KATNAL1Q9BW62 490 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 APOL5Q9BWW9 433 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 BCL11AQ9H165 835 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 IL17RBQ9NRM6 502 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 COL20A1Q9P218 1284 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 MYH7BA7E2Y1 1941 aa10.77□□□□□ -0.68
NUP54-211ENST00000512151 TTC3P53804 2025 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 PLXNA4Q9HCM2 1894 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 PKD1L2Q7Z442 2459 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 IPO8O15397 1037 aaKnown RBP10.77□□□□□ -0.69
NUP54-211ENST00000512151 SORBS3O60504 671 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 ANGPT1Q15389 498 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 ST3GAL2Q16842 350 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 CCDC96Q2M329 555 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 SYCE2Q6PIF2 218 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 UBALD2Q8IYN6 164 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 PPTC7Q8NI37 304 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 ATP6V0A1Q93050 837 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 PPP2R3CQ969Q6 453 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 OSBP2Q969R2 916 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 EMID1Q96A84 441 aaPredicted RBP10.77□□□□□ -0.69
NUP54-211ENST00000512151 SORCS3Q9UPU3 1222 aa10.77□□□□□ -0.69
NUP54-211ENST00000512151 C17orf102A2RUQ5 167 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 ENPP3O14638 875 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 DGKIO75912 1065 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 IFIT2P09913 472 aaKnown RBP10.76□□□□□ -0.69
NUP54-211ENST00000512151 ATP5JP18859 108 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 CLCN5P51795 746 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 MTMR3Q13615 1198 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 COL9A2Q14055 689 aaPredicted RBP10.76□□□□□ -0.69
NUP54-211ENST00000512151 DCLK2Q8N568 766 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 KCNG4Q8TDN1 519 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 APBB2Q92870 758 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 TAAR1Q96RJ0 339 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 MPHOSPH6Q99547 160 aaKnown RBP10.76□□□□□ -0.69
NUP54-211ENST00000512151 C16orf70Q9BSU1 422 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 TLE6Q9H808 572 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 GPCPD1Q9NPB8 672 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 SUPT16HQ9Y5B9 1047 aaKnown RBP10.76□□□□□ -0.69
NUP54-211ENST00000512151 GTF3C3Q9Y5Q9 886 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 R4GN57 208 aa10.76□□□□□ -0.69
NUP54-211ENST00000512151 FRMPD2Q68DX3 1309 aaPredicted RBP10.75□□□□□ -0.69
NUP54-211ENST00000512151 C2CD4DB7Z1M9 353 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 LMNAP02545 664 aaKnown RBP10.75□□□□□ -0.69
NUP54-211ENST00000512151 ASGR2P07307 311 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 SMIM10L2AP0DMW4 78 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms