RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 CCDC138Q96M89 665 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 SH3GL2Q99962 352 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 TROVE2P10155 538 aaKnown RBP eCLIP11.8□□□□□ -0.52
CPNE4-209ENST00000512055 UBXN2AP68543 259 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 PFKFB3Q16875 520 aaPredicted RBP11.8□□□□□ -0.52
CPNE4-209ENST00000512055 GNPTABQ3T906 1256 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 CNKSR1Q969H4 720 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 CEP19Q96LK0 163 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 PLCB1Q9NQ66 1216 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 PANK4Q9NVE7 773 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 PSDA5PKW4 1024 aaPredicted RBP11.79□□□□□ -0.52
CPNE4-209ENST00000512055 USP17L5A8MUK1 530 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 E9PMD0 336 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 GIPC1O14908 333 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 S100BP04271 92 aaPredicted RBP11.79□□□□□ -0.52
CPNE4-209ENST00000512055 SLC9C1Q4G0N8 1177 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 GPATCH4Q5T3I0 446 aaKnown RBP11.79□□□□□ -0.52
CPNE4-209ENST00000512055 PLA2G4DQ86XP0 818 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 CAPS2Q9BXY5 557 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 ANKRD26Q9UPS8 1709 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 GAS7O60861 476 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 PLCG1P19174 1290 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 SNAP25P60880 206 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 SARM1Q6SZW1 724 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 VSTM4Q8IW00 320 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 STAG2Q8N3U4 1231 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 AFAP1L2Q8N4X5 818 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 TUBGCP2Q9BSJ2 902 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 GDAQ9Y2T3 454 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 CUL4BQ13620 913 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 DHX40Q8IX18 779 aaKnown RBP11.79□□□□□ -0.52
CPNE4-209ENST00000512055 CCDC51Q96ER9 411 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 CCDC17Q96LX7 622 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 UTP11Q9Y3A2 253 aaKnown RBP11.79□□□□□ -0.52
CPNE4-209ENST00000512055 CALUO43852 315 aaPredicted RBP11.79□□□□□ -0.52
CPNE4-209ENST00000512055 KLRK1P26718 216 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 ST3GAL1Q11201 340 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 ASIC2Q16515 512 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 SEL1L2Q5TEA6 688 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 LARP4BQ92615 738 aaKnown RBP11.79□□□□□ -0.52
CPNE4-209ENST00000512055 CEP95Q96GE4 821 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 CNOT6LQ96LI5 555 aaKnown RBP11.79□□□□□ -0.52
CPNE4-209ENST00000512055 IFIH1Q9BYX4 1025 aaKnown RBP11.79□□□□□ -0.52
CPNE4-209ENST00000512055 UBAP1Q9NZ09 502 aa11.79□□□□□ -0.52
CPNE4-209ENST00000512055 KDM1AO60341 852 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 RAD17O75943 681 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 KRT14P02533 472 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 FAM26FQ5R3K3 315 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 ZNF658Q5TYW1 1059 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-209ENST00000512055 SRBD1Q8N5C6 995 aaKnown RBP11.78□□□□□ -0.52
CPNE4-209ENST00000512055 PAWRQ96IZ0 340 aaKnown RBP11.78□□□□□ -0.52
CPNE4-209ENST00000512055 PICK1Q9NRD5 415 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 KRT75O95678 551 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 LMNB2Q03252 620 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 KLHL30Q0D2K2 578 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 IFT88Q13099 833 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 SDCCAG3Q96C92 435 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-209ENST00000512055 LAD1O00515 517 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 EEF1B2P24534 225 aaKnown RBP11.78□□□□□ -0.52
CPNE4-209ENST00000512055 ARMC2Q8NEN0 867 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 CHURC1Q8WUH1 139 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 GJD4Q96KN9 370 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-209ENST00000512055 COA1Q9GZY4 146 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 KDM3AQ9Y4C1 1321 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 SOWAHDA6NJG2 315 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 LMNAP02545 664 aaKnown RBP11.78□□□□□ -0.52
CPNE4-209ENST00000512055 HARSP12081 509 aaKnown RBP11.78□□□□□ -0.52
CPNE4-209ENST00000512055 ITIH3Q06033 890 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 PABPC4Q13310 644 aaKnown RBP eCLIP11.78□□□□□ -0.52
CPNE4-209ENST00000512055 TMC4Q7Z404 712 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-209ENST00000512055 AMNQ9BXJ7 453 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 DAAM1Q9Y4D1 1078 aa11.78□□□□□ -0.52
CPNE4-209ENST00000512055 KIF1CO43896 1103 aaKnown RBP11.77□□□□□ -0.52
CPNE4-209ENST00000512055 EXOC3O60645 756 aa11.77□□□□□ -0.52
CPNE4-209ENST00000512055 ALAS1P13196 640 aa11.77□□□□□ -0.52
CPNE4-209ENST00000512055 A0A087WUV0 522 aaPredicted RBP11.77□□□□□ -0.52
CPNE4-209ENST00000512055 PP2D1A8MPX8 630 aa11.77□□□□□ -0.52
CPNE4-209ENST00000512055 CROCCP2Q86T23 111 aa11.77□□□□□ -0.52
CPNE4-209ENST00000512055 PSPC1Q8WXF1 523 aaKnown RBP11.77□□□□□ -0.52
CPNE4-209ENST00000512055 CENPKQ9BS16 269 aa11.77□□□□□ -0.52
CPNE4-209ENST00000512055 LSM14BQ9BX40 385 aaKnown RBP11.77□□□□□ -0.52
CPNE4-209ENST00000512055 DRC3Q9H069 523 aa11.77□□□□□ -0.52
CPNE4-209ENST00000512055 CCDC68Q9H2F9 335 aa11.77□□□□□ -0.52
CPNE4-209ENST00000512055 SUFUQ9UMX1 484 aa11.77□□□□□ -0.52
CPNE4-209ENST00000512055 EPN1Q9Y6I3 576 aaPredicted RBP11.77□□□□□ -0.52
CPNE4-209ENST00000512055 MROH7-TTC4A0A0A0MT08 1334 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 DNAJC6O75061 913 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 SKIP12755 728 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 DYNC1I2Q13409 638 aaKnown RBP11.77□□□□□ -0.53
CPNE4-209ENST00000512055 ANKRD13CQ8N6S4 541 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 AK8Q96MA6 479 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 PLEKHA4Q9H4M7 779 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 KANSL2Q9H9L4 492 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 DISC1Q9NRI5 854 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 NPR1P16066 1061 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 DAB2P98082 770 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms