RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 RILPL1Q5EBL4 403 aa22.2■■□□□ 1.14
SMAD1-211ENST00000512019 NLRX1Q86UT6 975 aa22.2■■□□□ 1.14
SMAD1-211ENST00000512019 FBXO16Q8IX29 292 aaPredicted RBP22.2■■□□□ 1.14
SMAD1-211ENST00000512019 INPP4AQ96PE3 977 aaPredicted RBP22.2■■□□□ 1.14
SMAD1-211ENST00000512019 A0A0C4DFX4 3053 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 BRD1O95696 1058 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 F13A1P00488 732 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 RAG1P15918 1043 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 SETQ01105 290 aaPredicted RBP22.19■■□□□ 1.14
SMAD1-211ENST00000512019 CCDC144BQ3MJ40 725 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 EEPD1Q7L9B9 569 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 NIPA1Q7RTP0 329 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 GPRASP2Q96D09 838 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 CDHR1Q96JP9 859 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 MXRA8Q9BRK3 442 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 KATNBL1Q9H079 304 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 TMEM39AQ9NV64 488 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 UBIAD1Q9Y5Z9 338 aa22.19■■□□□ 1.14
SMAD1-211ENST00000512019 UNC80Q8N2C7 3258 aa22.18■■□□□ 1.14
SMAD1-211ENST00000512019 MOXD2PA6NHM9 499 aa22.18■■□□□ 1.14
SMAD1-211ENST00000512019 CCNT1O60563 726 aaKnown RBP22.18■■□□□ 1.14
SMAD1-211ENST00000512019 C6orf222P0C671 652 aaPredicted RBP22.18■■□□□ 1.14
SMAD1-211ENST00000512019 FOXD4L5Q5VV16 416 aaPredicted RBP22.18■■□□□ 1.14
SMAD1-211ENST00000512019 MYSM1Q5VVJ2 828 aa22.18■■□□□ 1.14
SMAD1-211ENST00000512019 PPP4R3AQ6IN85 833 aa22.18■■□□□ 1.14
SMAD1-211ENST00000512019 ANKRD33Q7Z3H0 272 aa22.18■■□□□ 1.14
SMAD1-211ENST00000512019 FOXD4L4Q8WXT5 416 aaPredicted RBP22.18■■□□□ 1.14
SMAD1-211ENST00000512019 CDX2Q99626 313 aaPredicted RBP22.18■■□□□ 1.14
SMAD1-211ENST00000512019 TTYH1Q9H313 450 aaPredicted RBP22.18■■□□□ 1.14
SMAD1-211ENST00000512019 SEMA6BQ9H3T3 888 aa22.18■■□□□ 1.14
SMAD1-211ENST00000512019 JADE2Q9NQC1 790 aa22.18■■□□□ 1.14
SMAD1-211ENST00000512019 RTEL1Q9NZ71 1219 aa22.18■■□□□ 1.14
SMAD1-211ENST00000512019 CYP3A7-CYP3A51PA0A087WV96 503 aa22.17■■□□□ 1.14
SMAD1-211ENST00000512019 FAM86B1E9PN63 330 aa22.17■■□□□ 1.14
SMAD1-211ENST00000512019 FIBPO43427 364 aa22.17■■□□□ 1.14
SMAD1-211ENST00000512019 FAM86B2P0C5J1 330 aa22.17■■□□□ 1.14
SMAD1-211ENST00000512019 ITGB5P18084 799 aa22.17■■□□□ 1.14
SMAD1-211ENST00000512019 CYP3A7P24462 503 aa22.17■■□□□ 1.14
SMAD1-211ENST00000512019 ORC2Q13416 577 aaPredicted RBP22.17■■□□□ 1.14
SMAD1-211ENST00000512019 MTMR1Q13613 665 aa22.17■■□□□ 1.14
SMAD1-211ENST00000512019 TTC38Q5R3I4 469 aa22.17■■□□□ 1.14
SMAD1-211ENST00000512019 KCNV1Q6PIU1 500 aa22.17■■□□□ 1.14
SMAD1-211ENST00000512019 SEPT14Q6ZU15 432 aa22.17■■□□□ 1.14
SMAD1-211ENST00000512019 SCFD2Q8WU76 684 aa22.17■■□□□ 1.14
SMAD1-211ENST00000512019 DDX25Q9UHL0 483 aaKnown RBP22.17■■□□□ 1.14
SMAD1-211ENST00000512019 MEIS1O00470 390 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 MAFGO15525 162 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 TDP2O95551 362 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 ASGR1P07306 291 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 ATP2B1P20020 1258 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 CST5P28325 142 aaPredicted RBP22.16■■□□□ 1.14
SMAD1-211ENST00000512019 SMAD3P84022 425 aaKnown RBP22.16■■□□□ 1.14
SMAD1-211ENST00000512019 TTLL4Q14679 1199 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 Q4G0T1 1027 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 PRR16Q569H4 304 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 PLA2G4DQ86XP0 818 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 ZFP91Q96JP5 570 aaPredicted RBP22.16■■□□□ 1.14
SMAD1-211ENST00000512019 RNPC3Q96LT9 517 aaKnown RBP22.16■■□□□ 1.14
SMAD1-211ENST00000512019 MBOAT7Q96N66 472 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 TOX2Q96NM4 488 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 UPF3AQ9H1J1 476 aaKnown RBP22.16■■□□□ 1.14
SMAD1-211ENST00000512019 ATP6V1DQ9Y5K8 247 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 MRVI1Q9Y6F6 885 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 KIAA1217Q5T5P2 1943 aa22.16■■□□□ 1.14
SMAD1-211ENST00000512019 EYSQ5T1H1 3165 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 IGLV3-22A0A075B6J6 115 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.15■■□□□ 1.14
SMAD1-211ENST00000512019 DCDC2CA8MYV0 355 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 CTAGE5O15320 804 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 EDIL3O43854 480 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 RGS20O76081 388 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 TGFB3P10600 412 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 ICAM3P32942 547 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 GJA9P57773 515 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 FPGSQ05932 587 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 TAPT1Q6NXT6 567 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 CYP2W1Q8TAV3 490 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 WDR11Q9BZH6 1224 aa22.15■■□□□ 1.14
SMAD1-211ENST00000512019 RBM47A0AV96 593 aaKnown RBP22.14■■□□□ 1.13
SMAD1-211ENST00000512019 SPATA31C2B4DYI2 1134 aa22.14■■□□□ 1.13
SMAD1-211ENST00000512019 PTGS1P23219 599 aa22.14■■□□□ 1.13
SMAD1-211ENST00000512019 MCM7P33993 719 aa22.14■■□□□ 1.13
SMAD1-211ENST00000512019 CDK7P50613 346 aa22.14■■□□□ 1.13
SMAD1-211ENST00000512019 TOB1P50616 345 aaPredicted RBP22.14■■□□□ 1.13
SMAD1-211ENST00000512019 IQSEC1Q6DN90 963 aa22.14■■□□□ 1.13
SMAD1-211ENST00000512019 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.14■■□□□ 1.13
SMAD1-211ENST00000512019 MYLIPQ8WY64 445 aa22.14■■□□□ 1.13
SMAD1-211ENST00000512019 GLT1D1Q96MS3 346 aa22.14■■□□□ 1.13
SMAD1-211ENST00000512019 KCNH7Q9NS40 1196 aa22.14■■□□□ 1.13
SMAD1-211ENST00000512019 CHMP5Q9NZZ3 219 aa22.14■■□□□ 1.13
SMAD1-211ENST00000512019 TBX21Q9UL17 535 aa22.14■■□□□ 1.13
SMAD1-211ENST00000512019 ZDHHC9Q9Y397 364 aa22.14■■□□□ 1.13
SMAD1-211ENST00000512019 ELP1O95163 1332 aa22.13■■□□□ 1.13
SMAD1-211ENST00000512019 NEMFO60524 1076 aa22.13■■□□□ 1.13
SMAD1-211ENST00000512019 BEX3Q00994 111 aa22.13■■□□□ 1.13
SMAD1-211ENST00000512019 GNASQ5JWF2 1037 aa22.13■■□□□ 1.13
SMAD1-211ENST00000512019 PCSK9Q8NBP7 692 aaKnown RBP22.13■■□□□ 1.13
SMAD1-211ENST00000512019 LENG9Q96B70 501 aa22.13■■□□□ 1.13
SMAD1-211ENST00000512019 ZNF396Q96N95 335 aaPredicted RBP22.13■■□□□ 1.13
SMAD1-211ENST00000512019 PDGFCQ9NRA1 345 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms