RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 DEFB128Q7Z7B8 93 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 C7orf31Q8N865 590 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 CYP2W1Q8TAV3 490 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 DHX38Q92620 1227 aaKnown RBP15.22■□□□□ 0.03
RNF4-215ENST00000511843 GPR20Q99678 358 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 TM6SF1Q9BZW5 370 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 PDRG1Q9NUG6 133 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 GTF2IRD1Q9UHL9 959 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 UBIAD1Q9Y5Z9 338 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 GRXCR1A8MXD5 290 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 hCG_1984214I3L0E3 225 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 PRPF3O43395 683 aaKnown RBP15.21■□□□□ 0.03
RNF4-215ENST00000511843 PPFIA4O75335 1185 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 LGALS2P05162 132 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 KCNA2P16389 499 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 CLK2P49760 499 aaKnown RBP15.21■□□□□ 0.03
RNF4-215ENST00000511843 MTMR1Q13613 665 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 NEDD9Q14511 834 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 UTP14CQ5TAP6 766 aaKnown RBP15.21■□□□□ 0.03
RNF4-215ENST00000511843 METTL7BQ6UX53 244 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 OTOP2Q7RTS6 562 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 SESTD1Q86VW0 696 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 ZNF713Q8N859 430 aaPredicted RBP15.21■□□□□ 0.03
RNF4-215ENST00000511843 WNT8BQ93098 351 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 GPRASP2Q96D09 838 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 UIMC1Q96RL1 719 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 KATNAL1Q9BW62 490 aa15.21■□□□□ 0.03
RNF4-215ENST00000511843 CXXC1Q9P0U4 656 aaPredicted RBP15.21■□□□□ 0.03
RNF4-215ENST00000511843 COL6A3P12111 3177 aa15.2■□□□□ 0.02
RNF4-215ENST00000511843 IFNAR1P17181 557 aa15.2■□□□□ 0.02
RNF4-215ENST00000511843 RASGRP4Q8TDF6 673 aa15.2■□□□□ 0.02
RNF4-215ENST00000511843 EHMT1Q9H9B1 1298 aa15.2■□□□□ 0.02
RNF4-215ENST00000511843 JADE2Q9NQC1 790 aa15.2■□□□□ 0.02
RNF4-215ENST00000511843 VPS54Q9P1Q0 977 aa15.2■□□□□ 0.02
RNF4-215ENST00000511843 SIP14410 1827 aa15.2■□□□□ 0.02
RNF4-215ENST00000511843 H3BRB1 525 aa15.19■□□□□ 0.02
RNF4-215ENST00000511843 FGBP02675 491 aa15.19■□□□□ 0.02
RNF4-215ENST00000511843 ARP10275 920 aa15.19■□□□□ 0.02
RNF4-215ENST00000511843 AKAP17AQ02040 695 aaKnown RBP15.19■□□□□ 0.02
RNF4-215ENST00000511843 GPR153Q6NV75 609 aa15.19■□□□□ 0.02
RNF4-215ENST00000511843 PSRC1Q6PGN9 363 aaPredicted RBP15.19■□□□□ 0.02
RNF4-215ENST00000511843 AIFM3Q96NN9 605 aa15.19■□□□□ 0.02
RNF4-215ENST00000511843 SENP7Q9BQF6 1050 aa15.19■□□□□ 0.02
RNF4-215ENST00000511843 MXRA8Q9BRK3 442 aa15.19■□□□□ 0.02
RNF4-215ENST00000511843 RNF26Q9BY78 433 aaPredicted RBP15.19■□□□□ 0.02
RNF4-215ENST00000511843 TUT1Q9H6E5 874 aaKnown RBP15.19■□□□□ 0.02
RNF4-215ENST00000511843 MTMR10Q9NXD2 777 aa15.19■□□□□ 0.02
RNF4-215ENST00000511843 LOXHD1Q8IVV2 1947 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 FOSP01100 380 aaPredicted RBP15.18■□□□□ 0.02
RNF4-215ENST00000511843 IQCF3P0C7M6 154 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 SMIM10L2AP0DMW4 78 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 SMIM10L2BP0DMW5 78 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 TCF7P36402 384 aaPredicted RBP15.18■□□□□ 0.02
RNF4-215ENST00000511843 SREBF1P36956 1147 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 PBX2P40425 430 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 SMAD3P84022 425 aaKnown RBP15.18■□□□□ 0.02
RNF4-215ENST00000511843 ARHGAP4P98171 946 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 AP3B2Q13367 1082 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 RASIP1Q5U651 963 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 ZNF274Q96GC6 653 aaPredicted RBP15.18■□□□□ 0.02
RNF4-215ENST00000511843 ZMYND12Q9H0C1 365 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 KCNH7Q9NS40 1196 aa15.18■□□□□ 0.02
RNF4-215ENST00000511843 MYH9P35579 1960 aaKnown RBP15.18■□□□□ 0.02
RNF4-215ENST00000511843 GSTTP1A0A1W2PQM5 241 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 ESYT2A0FGR8 921 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 PITPNM1O00562 1244 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 CPLX1O14810 134 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 MARK3P27448 753 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 SSRP1Q08945 709 aaKnown RBP15.17■□□□□ 0.02
RNF4-215ENST00000511843 BFSP2Q13515 415 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 ZNF697Q5TEC3 545 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 REXO1Q8N1G1 1221 aaKnown RBP15.17■□□□□ 0.02
RNF4-215ENST00000511843 HERVK_113Q902F9 699 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 CDHR1Q96JP9 859 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 GUCD1Q96NT3 240 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 TTYH1Q9H313 450 aaPredicted RBP15.17■□□□□ 0.02
RNF4-215ENST00000511843 RNPEPQ9H4A4 650 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 C6orf50Q9HD87 102 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 SETD4Q9NVD3 440 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 TPCN1Q9ULQ1 816 aa15.17■□□□□ 0.02
RNF4-215ENST00000511843 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.16■□□□□ 0.02
RNF4-215ENST00000511843 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.16■□□□□ 0.02
RNF4-215ENST00000511843 C17orf102A2RUQ5 167 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 ZBBXA8MT70 800 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 FAM86B1E9PN63 330 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 DDX39AO00148 427 aaKnown RBP15.16■□□□□ 0.02
RNF4-215ENST00000511843 TREHO43280 583 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 FAM86B2P0C5J1 330 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 CKBP12277 381 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 DNAJB2P25686 324 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 ZNF76P36508 570 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 AK2P54819 239 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 SCRN1Q12765 414 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 ITGB3BPQ13352 177 aaPredicted RBP15.16■□□□□ 0.02
RNF4-215ENST00000511843 GPNMBQ14956 572 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 TRIM71Q2Q1W2 868 aaKnown RBP15.16■□□□□ 0.02
RNF4-215ENST00000511843 CEP55Q53EZ4 464 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 LRRC8DQ7L1W4 858 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 TRIM22Q8IYM9 498 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms