RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 RETREG2Q8NC44 543 aa19.27■□□□□ 0.68
SMN2-210ENST00000511812 BICD2Q8TD16 824 aa19.27■□□□□ 0.68
SMN2-210ENST00000511812 ZMYND12Q9H0C1 365 aa19.27■□□□□ 0.68
SMN2-210ENST00000511812 TMEM260Q9NX78 707 aa19.27■□□□□ 0.68
SMN2-210ENST00000511812 RANBP2P49792 3224 aaKnown RBP19.27■□□□□ 0.67
SMN2-210ENST00000511812 UMODL1Q5DID0 1318 aa19.26■□□□□ 0.67
SMN2-210ENST00000511812 PSRC1Q6PGN9 363 aaPredicted RBP19.26■□□□□ 0.67
SMN2-210ENST00000511812 RPUSD2Q8IZ73 545 aaKnown RBP19.26■□□□□ 0.67
SMN2-210ENST00000511812 REXO1Q8N1G1 1221 aaKnown RBP19.26■□□□□ 0.67
SMN2-210ENST00000511812 MXRA8Q9BRK3 442 aa19.26■□□□□ 0.67
SMN2-210ENST00000511812 SLKQ9H2G2 1235 aaPredicted RBP19.26■□□□□ 0.67
SMN2-210ENST00000511812 IL23AQ9NPF7 189 aa19.26■□□□□ 0.67
SMN2-210ENST00000511812 PKD2L1Q9P0L9 805 aa19.26■□□□□ 0.67
SMN2-210ENST00000511812 HDAC6Q9UBN7 1215 aa19.26■□□□□ 0.67
SMN2-210ENST00000511812 GTF2IRD1Q9UHL9 959 aa19.26■□□□□ 0.67
SMN2-210ENST00000511812 H3BRB1 525 aa19.25■□□□□ 0.67
SMN2-210ENST00000511812 HAS3O00219 553 aa19.25■□□□□ 0.67
SMN2-210ENST00000511812 CDKL5O76039 1030 aa19.25■□□□□ 0.67
SMN2-210ENST00000511812 DEXIO95424 95 aa19.25■□□□□ 0.67
SMN2-210ENST00000511812 LGALS2P05162 132 aa19.25■□□□□ 0.67
SMN2-210ENST00000511812 ACRP10323 421 aa19.25■□□□□ 0.67
SMN2-210ENST00000511812 SREBF1P36956 1147 aa19.25■□□□□ 0.67
SMN2-210ENST00000511812 CLK2P49760 499 aaKnown RBP19.25■□□□□ 0.67
SMN2-210ENST00000511812 GDF6Q6KF10 455 aaPredicted RBP19.25■□□□□ 0.67
SMN2-210ENST00000511812 GPR153Q6NV75 609 aa19.25■□□□□ 0.67
SMN2-210ENST00000511812 GPR20Q99678 358 aa19.25■□□□□ 0.67
SMN2-210ENST00000511812 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMN2-210ENST00000511812 MTIF3Q9H2K0 278 aaKnown RBP19.25■□□□□ 0.67
SMN2-210ENST00000511812 TUT1Q9H6E5 874 aaKnown RBP19.25■□□□□ 0.67
SMN2-210ENST00000511812 BCAS3Q9H6U6 928 aa19.25■□□□□ 0.67
SMN2-210ENST00000511812 ZNF215Q9UL58 517 aaPredicted RBP19.25■□□□□ 0.67
SMN2-210ENST00000511812 ATP9AO75110 1047 aa19.24■□□□□ 0.67
SMN2-210ENST00000511812 KCNA2P16389 499 aa19.24■□□□□ 0.67
SMN2-210ENST00000511812 NLRP5P59047 1200 aa19.24■□□□□ 0.67
SMN2-210ENST00000511812 CEP55Q53EZ4 464 aa19.24■□□□□ 0.67
SMN2-210ENST00000511812 UTP14CQ5TAP6 766 aaKnown RBP19.24■□□□□ 0.67
SMN2-210ENST00000511812 CAGE1Q8TC20 777 aa19.24■□□□□ 0.67
SMN2-210ENST00000511812 SDF4Q9BRK5 362 aa19.24■□□□□ 0.67
SMN2-210ENST00000511812 C16orf70Q9BSU1 422 aa19.24■□□□□ 0.67
SMN2-210ENST00000511812 WNT8AQ9H1J5 351 aa19.24■□□□□ 0.67
SMN2-210ENST00000511812 SH3GLB2Q9NR46 395 aa19.24■□□□□ 0.67
SMN2-210ENST00000511812 KCNH7Q9NS40 1196 aa19.24■□□□□ 0.67
SMN2-210ENST00000511812 VPS54Q9P1Q0 977 aa19.24■□□□□ 0.67
SMN2-210ENST00000511812 PITPNM1O00562 1244 aa19.23■□□□□ 0.67
SMN2-210ENST00000511812 FGBP02675 491 aa19.23■□□□□ 0.67
SMN2-210ENST00000511812 ARHGAP4P98171 946 aa19.23■□□□□ 0.67
SMN2-210ENST00000511812 TMEM240Q5SV17 173 aa19.23■□□□□ 0.67
SMN2-210ENST00000511812 ZNF365Q70YC5 407 aa19.23■□□□□ 0.67
SMN2-210ENST00000511812 SEPT1Q8WYJ6 367 aa19.23■□□□□ 0.67
SMN2-210ENST00000511812 SCLYQ96I15 445 aa19.23■□□□□ 0.67
SMN2-210ENST00000511812 SEC24BO95487 1268 aa19.22■□□□□ 0.67
SMN2-210ENST00000511812 NEK4P51957 841 aa19.22■□□□□ 0.67
SMN2-210ENST00000511812 AK2P54819 239 aa19.22■□□□□ 0.67
SMN2-210ENST00000511812 JPH1Q9HDC5 661 aaPredicted RBP19.22■□□□□ 0.67
SMN2-210ENST00000511812 TPCN1Q9ULQ1 816 aa19.22■□□□□ 0.67
SMN2-210ENST00000511812 C17orf102A2RUQ5 167 aa19.21■□□□□ 0.67
SMN2-210ENST00000511812 PFKFB2O60825 505 aa19.21■□□□□ 0.67
SMN2-210ENST00000511812 PFKMP08237 780 aa19.21■□□□□ 0.67
SMN2-210ENST00000511812 RFC2P35250 354 aa19.21■□□□□ 0.67
SMN2-210ENST00000511812 TCF7P36402 384 aaPredicted RBP19.21■□□□□ 0.67
SMN2-210ENST00000511812 SCRN1Q12765 414 aa19.21■□□□□ 0.67
SMN2-210ENST00000511812 C16orf59Q7L2K0 433 aa19.21■□□□□ 0.67
SMN2-210ENST00000511812 CYP2W1Q8TAV3 490 aa19.21■□□□□ 0.67
SMN2-210ENST00000511812 AFAP1L1Q8TED9 768 aa19.21■□□□□ 0.67
SMN2-210ENST00000511812 IL17RAQ96F46 866 aa19.21■□□□□ 0.67
SMN2-210ENST00000511812 SLC9A2Q9UBY0 812 aa19.21■□□□□ 0.67
SMN2-210ENST00000511812 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.2■□□□□ 0.66
SMN2-210ENST00000511812 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.2■□□□□ 0.66
SMN2-210ENST00000511812 MEIS1O00470 390 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 CYP3A4P08684 503 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 IQCF3P0C7M6 154 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 SMIM10L2AP0DMW4 78 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 SMIM10L2BP0DMW5 78 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 ARP10275 920 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 GNAT1P11488 350 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 XBP1P17861 261 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 SMAD3P84022 425 aaKnown RBP19.2■□□□□ 0.66
SMN2-210ENST00000511812 PTK7Q13308 1070 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 NIPA1Q7RTP0 329 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 DEFB128Q7Z7B8 93 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 PLA2G4DQ86XP0 818 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 DEFB123Q8N688 67 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 RASGRP4Q8TDF6 673 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 GLG1Q92896 1179 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 ATP6V0A1Q93050 837 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 C22orf23Q9BZE7 217 aa19.2■□□□□ 0.66
SMN2-210ENST00000511812 ACTN1P12814 892 aa19.19■□□□□ 0.66
SMN2-210ENST00000511812 ZNF697Q5TEC3 545 aa19.19■□□□□ 0.66
SMN2-210ENST00000511812 OTOP2Q7RTS6 562 aa19.19■□□□□ 0.66
SMN2-210ENST00000511812 TRIM50Q86XT4 487 aa19.19■□□□□ 0.66
SMN2-210ENST00000511812 FAM177A1Q8N128 213 aaPredicted RBP19.19■□□□□ 0.66
SMN2-210ENST00000511812 HERVK_113Q902F9 699 aa19.19■□□□□ 0.66
SMN2-210ENST00000511812 FTOQ9C0B1 505 aaKnown RBP eCLIP19.19■□□□□ 0.66
SMN2-210ENST00000511812 SMARCAD1Q9H4L7 1026 aa19.19■□□□□ 0.66
SMN2-210ENST00000511812 AZI2Q9H6S1 392 aa19.19■□□□□ 0.66
SMN2-210ENST00000511812 AGO4Q9HCK5 861 aaKnown RBP19.19■□□□□ 0.66
SMN2-210ENST00000511812 PCDHA4Q9UN74 947 aa19.19■□□□□ 0.66
SMN2-210ENST00000511812 NFASCO94856 1347 aa19.19■□□□□ 0.66
SMN2-210ENST00000511812 GSTTP1A0A1W2PQM5 241 aa19.18■□□□□ 0.66
SMN2-210ENST00000511812 PARNO95453 639 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms