RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 SPATA33Q96N06 139 aa22.22■■□□□ 1.15
HMGCS1-206ENST00000511774 IFIH1Q9BYX4 1025 aaKnown RBP22.22■■□□□ 1.15
HMGCS1-206ENST00000511774 FAM50BQ9Y247 325 aa22.22■■□□□ 1.15
HMGCS1-206ENST00000511774 KMT2EQ8IZD2 1858 aa22.22■■□□□ 1.15
HMGCS1-206ENST00000511774 CFBP00751 764 aa22.21■■□□□ 1.15
HMGCS1-206ENST00000511774 SMIM10L2AP0DMW4 78 aa22.21■■□□□ 1.15
HMGCS1-206ENST00000511774 SMIM10L2BP0DMW5 78 aa22.21■■□□□ 1.15
HMGCS1-206ENST00000511774 UBA1P22314 1058 aaKnown RBP22.21■■□□□ 1.15
HMGCS1-206ENST00000511774 HSD17B4P51659 736 aa22.21■■□□□ 1.15
HMGCS1-206ENST00000511774 MFSD14AQ96MC6 490 aa22.21■■□□□ 1.15
HMGCS1-206ENST00000511774 PDCD2LQ9BRP1 358 aa22.21■■□□□ 1.15
HMGCS1-206ENST00000511774 RNPEPQ9H4A4 650 aa22.21■■□□□ 1.15
HMGCS1-206ENST00000511774 JMJD4Q9H9V9 463 aa22.21■■□□□ 1.15
HMGCS1-206ENST00000511774 ZMYM6O95789 1325 aa22.21■■□□□ 1.15
HMGCS1-206ENST00000511774 MYO15AQ9UKN7 3530 aa22.21■■□□□ 1.15
HMGCS1-206ENST00000511774 C17orf102A2RUQ5 167 aa22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 PPP1R11O60927 126 aaPredicted RBP22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 CSPG5O95196 566 aa22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 MYCLP12524 364 aaPredicted RBP22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 CTNNB1P35222 781 aa22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 MFSD6Q6ZSS7 791 aa22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 MCF2L2Q86YR7 1114 aa22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 PNMA1Q8ND90 353 aa22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 UPF3BQ9BZI7 483 aaKnown RBP22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 RC3H2Q9HBD1 1191 aaKnown RBP22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 ALG13Q9NP73 1137 aaKnown RBP22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 TELO2Q9Y4R8 837 aa22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 LAMA4Q16363 1823 aa22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 KIAA1671Q9BY89 1806 aa22.2■■□□□ 1.14
HMGCS1-206ENST00000511774 C5orf67F2Z3F1 127 aa22.19■■□□□ 1.14
HMGCS1-206ENST00000511774 CAMK1Q14012 370 aa22.19■■□□□ 1.14
HMGCS1-206ENST00000511774 MCMDC2Q4G0Z9 681 aa22.19■■□□□ 1.14
HMGCS1-206ENST00000511774 VAT1LQ9HCJ6 419 aa22.19■■□□□ 1.14
HMGCS1-206ENST00000511774 MRPL11Q9Y3B7 192 aaKnown RBP22.19■■□□□ 1.14
HMGCS1-206ENST00000511774 SUPT16HQ9Y5B9 1047 aaKnown RBP22.19■■□□□ 1.14
HMGCS1-206ENST00000511774 BAZ2BQ9UIF8 2168 aaKnown RBP22.18■■□□□ 1.14
HMGCS1-206ENST00000511774 TTC3P53804 2025 aa22.18■■□□□ 1.14
HMGCS1-206ENST00000511774 LGALS2P05162 132 aa22.18■■□□□ 1.14
HMGCS1-206ENST00000511774 BMPR1AP36894 532 aa22.18■■□□□ 1.14
HMGCS1-206ENST00000511774 GHRHRQ02643 423 aa22.18■■□□□ 1.14
HMGCS1-206ENST00000511774 NMIQ13287 307 aaPredicted RBP22.18■■□□□ 1.14
HMGCS1-206ENST00000511774 VSIG10LQ86VR7 867 aa22.18■■□□□ 1.14
HMGCS1-206ENST00000511774 DGKHQ86XP1 1220 aa22.18■■□□□ 1.14
HMGCS1-206ENST00000511774 EDAQ92838 391 aa22.18■■□□□ 1.14
HMGCS1-206ENST00000511774 EVI5LQ96CN4 794 aa22.18■■□□□ 1.14
HMGCS1-206ENST00000511774 H3BRB1 525 aa22.17■■□□□ 1.14
HMGCS1-206ENST00000511774 HOXA13P31271 388 aaPredicted RBP22.17■■□□□ 1.14
HMGCS1-206ENST00000511774 TCF15Q12870 199 aa22.17■■□□□ 1.14
HMGCS1-206ENST00000511774 SMAD4Q13485 552 aaKnown RBP22.17■■□□□ 1.14
HMGCS1-206ENST00000511774 PGM5Q15124 567 aa22.17■■□□□ 1.14
HMGCS1-206ENST00000511774 STOX1Q6ZVD7 989 aa22.17■■□□□ 1.14
HMGCS1-206ENST00000511774 FIBCD1Q8N539 461 aa22.17■■□□□ 1.14
HMGCS1-206ENST00000511774 IL17RAQ96F46 866 aa22.17■■□□□ 1.14
HMGCS1-206ENST00000511774 IGFLR1Q9H665 355 aa22.17■■□□□ 1.14
HMGCS1-206ENST00000511774 TUT1Q9H6E5 874 aaKnown RBP22.17■■□□□ 1.14
HMGCS1-206ENST00000511774 SETD4Q9NVD3 440 aa22.17■■□□□ 1.14
HMGCS1-206ENST00000511774 DMDP11532 3685 aa22.16■■□□□ 1.14
HMGCS1-206ENST00000511774 STXBP3O00186 592 aa22.16■■□□□ 1.14
HMGCS1-206ENST00000511774 TRIM50Q86XT4 487 aa22.16■■□□□ 1.14
HMGCS1-206ENST00000511774 STAG2Q8N3U4 1231 aa22.16■■□□□ 1.14
HMGCS1-206ENST00000511774 CCDC171Q6TFL3 1326 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 KAT6AQ92794 2004 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 NCK2O43639 380 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 KDM4AO75164 1064 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 ADAM17P78536 824 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 ADAM15Q13444 863 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 SLC35G1Q2M3R5 365 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 ASPRV1Q53RT3 343 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 BMP8AQ7Z5Y6 402 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 ENAHQ8N8S7 591 aaPredicted RBP22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 ESR2Q92731 530 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 CLP1Q92989 425 aaKnown RBP22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 MSLNLQ96KJ4 702 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 CD207Q9UJ71 328 aa22.15■■□□□ 1.14
HMGCS1-206ENST00000511774 ADGRA3Q8IWK6 1321 aa22.14■■□□□ 1.14
HMGCS1-206ENST00000511774 TMEM221A6NGB7 291 aa22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 M0R296 226 aa22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 CAND2O75155 1236 aa22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 CHRNA1P02708 482 aa22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 RB1P06400 928 aa22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 PCP11498 1178 aaKnown RBP22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 DNAJB1P25685 340 aa22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 FAM26DQ5JW98 314 aa22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 TRIM67Q6ZTA4 783 aa22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 POP1Q99575 1024 aaKnown RBP22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 C11orf84Q9BUA3 381 aaPredicted RBP22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 LMAN2LQ9H0V9 348 aa22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 KAT14Q9H8E8 782 aa22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 PTPRZ1P23471 2315 aaPredicted RBP22.14■■□□□ 1.13
HMGCS1-206ENST00000511774 DHX16O60231 1041 aaKnown RBP22.13■■□□□ 1.13
HMGCS1-206ENST00000511774 PDE1AP54750 535 aa22.13■■□□□ 1.13
HMGCS1-206ENST00000511774 SEMA3FQ13275 785 aa22.13■■□□□ 1.13
HMGCS1-206ENST00000511774 KCNV1Q6PIU1 500 aa22.13■■□□□ 1.13
HMGCS1-206ENST00000511774 ADGRD2Q7Z7M1 963 aa22.13■■□□□ 1.13
HMGCS1-206ENST00000511774 ZNF689Q96CS4 500 aaPredicted RBP22.13■■□□□ 1.13
HMGCS1-206ENST00000511774 MTMR8Q96EF0 704 aa22.13■■□□□ 1.13
HMGCS1-206ENST00000511774 MLXIPQ9HAP2 919 aa22.13■■□□□ 1.13
HMGCS1-206ENST00000511774 CLEC1BQ9P126 229 aa22.13■■□□□ 1.13
HMGCS1-206ENST00000511774 RIF1Q5UIP0 2472 aaKnown RBP22.13■■□□□ 1.13
HMGCS1-206ENST00000511774 B4E1Z4 1266 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms