RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 MYO15AQ9UKN7 3530 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 TTLL13PA6NNM8 815 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 H3BQ06 376 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-225ENST00000511769 ZBTB5O15062 677 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 TLR3O15455 904 aaKnown RBP11.29□□□□□ -0.6
PTPN20-225ENST00000511769 BAG4O95429 457 aaKnown RBP11.29□□□□□ -0.6
PTPN20-225ENST00000511769 MMP1P03956 469 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 KRT2P35908 639 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 NAPAP54920 295 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 HERC4Q5GLZ8 1057 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-225ENST00000511769 KIAA1755Q5JYT7 1200 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 GALNT17Q6IS24 598 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 BRAPQ7Z569 592 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 SPRED2Q7Z698 418 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 KMT2EQ8IZD2 1858 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 EDAQ92838 391 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 KIFC2Q96AC6 838 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 ZNF396Q96N95 335 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-225ENST00000511769 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 GJB4Q9NTQ9 266 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 BARHL2Q9NY43 387 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 RALYQ9UKM9 306 aaKnown RBP11.29□□□□□ -0.6
PTPN20-225ENST00000511769 CTDP1Q9Y5B0 961 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-225ENST00000511769 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
PTPN20-225ENST00000511769 ZFHX2Q9C0A1 2572 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-225ENST00000511769 MYH6P13533 1939 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 UMODL1Q5DID0 1318 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 NCLP19338 710 aaKnown RBP11.28□□□□□ -0.6
PTPN20-225ENST00000511769 PTMSP20962 102 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 GNA11P29992 359 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 CCL23P55773 120 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 RESTQ13127 1097 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 ACAP1Q15027 740 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 ST3GAL2Q16842 350 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 SLC35G1Q2M3R5 365 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 WWC2Q6AWC2 1192 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 ADHFE1Q8IWW8 467 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 ADSSL1Q8N142 457 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 FBXL6Q8N531 539 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 PRPF38AQ8NAV1 312 aaKnown RBP11.28□□□□□ -0.6
PTPN20-225ENST00000511769 GPKOWQ92917 476 aaPredicted RBP eCLIP11.28□□□□□ -0.6
PTPN20-225ENST00000511769 MTMR8Q96EF0 704 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 C12orf42Q96LP6 360 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 TSEN34Q9BSV6 310 aaKnown RBP11.28□□□□□ -0.6
PTPN20-225ENST00000511769 PHF20Q9BVI0 1012 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 FOXP1Q9H334 677 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-225ENST00000511769 RPAP3Q9H6T3 665 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-225ENST00000511769 C6orf50Q9HD87 102 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 PRKAG3Q9UGI9 489 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 CFAP45Q9UL16 551 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 PRR12Q9ULL5 1215 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 PKD1L2Q7Z442 2459 aa11.28□□□□□ -0.6
PTPN20-225ENST00000511769 SMCO2A6NFE2 343 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 MOXD2PA6NHM9 499 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 STXBP3O00186 592 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 ADAMTS4O75173 837 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 FDX1P10109 184 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 VCAM1P19320 739 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 CDK7P50613 346 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 VCPP55072 806 aaKnown RBP11.27□□□□□ -0.61
PTPN20-225ENST00000511769 KRT85P78386 507 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 CDC37Q16543 378 aaPredicted RBP11.27□□□□□ -0.61
PTPN20-225ENST00000511769 ATL3Q6DD88 541 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 POTEGQ6S5H5 508 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 CLEC17AQ6ZS10 378 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 TRIM67Q6ZTA4 783 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 FBXO11Q86XK2 927 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 FAM126BQ8IXS8 530 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 DIS3L2Q8IYB7 885 aaKnown RBP11.27□□□□□ -0.61
PTPN20-225ENST00000511769 BICD2Q8TD16 824 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 VTI1AQ96AJ9 217 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 RMDN1Q96DB5 314 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 GLT1D1Q96MS3 346 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 SLF1Q9BQI6 1058 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 AMNQ9BXJ7 453 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 HIPK3Q9H422 1215 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 LMCD1Q9NZU5 365 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 BTBD7Q9P203 1132 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 PCDHA4Q9UN74 947 aa11.27□□□□□ -0.61
PTPN20-225ENST00000511769 ZNF236Q9UL36 1845 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 BTBD18B2RXH4 712 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 USP17L15C9J2P7 530 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 USP17L13C9JLJ4 530 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 USP17L11C9JVI0 530 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 USP17L18D6R9N7 530 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 USP17L22D6RA61 530 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 USP17L17D6RBQ6 530 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 USP17L19D6RCP7 530 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 USP17L20D6RJB6 530 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 COBLO75128 1261 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 ZBED4O75132 1171 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 FLOT1O75955 427 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 U2AF2P26368 475 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTPN20-225ENST00000511769 MCM4P33991 863 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 DNM1Q05193 864 aaKnown RBP11.26□□□□□ -0.61
PTPN20-225ENST00000511769 USP17L24Q0WX57 530 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 NFKBIBQ15653 356 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 KCNA10Q16322 511 aa11.26□□□□□ -0.61
PTPN20-225ENST00000511769 QRICH1Q2TAL8 776 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms