RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 SMIM22K7EJ46 135 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 C2CD2LO14523 706 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 IGSF3O75054 1194 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 GLRX3O76003 335 aaKnown RBP8.03□□□□□ -1.12
COPS4-209ENST00000511653 PDE6AP16499 860 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 NFKB1P19838 968 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 ADORA2AP29274 412 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 RTP1P59025 263 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 ATP2B2Q01814 1243 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 SPEM2Q0P670 501 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 MAP3K12Q12852 859 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 GJC2Q5T442 439 aaPredicted RBP8.03□□□□□ -1.12
COPS4-209ENST00000511653 ALG1LQ6GMV1 187 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 TTC6Q86TZ1 520 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 SDR42E1Q8WUS8 393 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 LPAR1Q92633 364 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 MOV10L1Q9BXT6 1211 aaKnown RBP8.03□□□□□ -1.12
COPS4-209ENST00000511653 MARK1Q9P0L2 795 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 DNM1LO00429 736 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 MPHOSPH10O00566 681 aaKnown RBP8.02□□□□□ -1.13
COPS4-209ENST00000511653 PSMD2Q13200 908 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 CERS3Q8IU89 383 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 LCORLQ8N3X6 602 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 TANGO6Q9C0B7 1094 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 SPATC1LQ9H0A9 340 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 CABP5Q9NP86 173 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 MCM9Q9NXL9 1143 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 ATP11BQ9Y2G3 1177 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 ZNF532Q9HCE3 1301 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 TCRBV5S4A2TA0A5A2 114 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 MSCO60682 206 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 COBLO75128 1261 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 CHGBP05060 677 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 RARAP10276 462 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 GNA15P30679 374 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 PRAMEF19Q5SWL8 479 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 C9orf50Q5SZB4 431 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 PEAR1Q5VY43 1037 aaPredicted RBP8.02□□□□□ -1.13
COPS4-209ENST00000511653 PANK1Q8TE04 598 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 BHMTQ93088 406 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 ATG4CQ96DT6 458 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 DYNLL2Q96FJ2 89 aa8.02□□□□□ -1.13
COPS4-209ENST00000511653 COL25A1Q9BXS0 654 aaPredicted RBP8.02□□□□□ -1.13
COPS4-209ENST00000511653 DCP1AQ9NPI6 582 aaPredicted RBP8.02□□□□□ -1.13
COPS4-209ENST00000511653 CYP2D7A0A087X1C5 515 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 GOLIM4O00461 696 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 AKR1B1P15121 316 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 FGFR3P22607 806 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 COG2Q14746 738 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 TRIM60Q495X7 471 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 SLC9C2Q5TAH2 1124 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 OLFML2BQ68BL8 750 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 DPP9Q86TI2 863 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 SIAH1Q8IUQ4 282 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 GALNT12Q8IXK2 581 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 SPICE1Q8N0Z3 855 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 GPR161Q8N6U8 529 aaKnown RBP8.01□□□□□ -1.13
COPS4-209ENST00000511653 DNAJC2Q99543 621 aaKnown RBP8.01□□□□□ -1.13
COPS4-209ENST00000511653 LBHD1Q9BQE6 289 aaPredicted RBP8.01□□□□□ -1.13
COPS4-209ENST00000511653 CRNKL1Q9BZJ0 848 aaKnown RBP8.01□□□□□ -1.13
COPS4-209ENST00000511653 ARMT1Q9H993 441 aa8.01□□□□□ -1.13
COPS4-209ENST00000511653 ATXN7L1Q9ULK2 861 aaPredicted RBP8.01□□□□□ -1.13
COPS4-209ENST00000511653 PRKAB2O43741 272 aa8□□□□□ -1.13
COPS4-209ENST00000511653 LAMC2Q13753 1193 aa8□□□□□ -1.13
COPS4-209ENST00000511653 PLS1Q14651 629 aa8□□□□□ -1.13
COPS4-209ENST00000511653 SNX17Q15036 470 aa8□□□□□ -1.13
COPS4-209ENST00000511653 SHHQ15465 462 aa8□□□□□ -1.13
COPS4-209ENST00000511653 FAM47AQ5JRC9 791 aa8□□□□□ -1.13
COPS4-209ENST00000511653 TTC39BQ5VTQ0 682 aaPredicted RBP8□□□□□ -1.13
COPS4-209ENST00000511653 PHF6Q8IWS0 365 aaKnown RBP eCLIP8□□□□□ -1.13
COPS4-209ENST00000511653 SHCBP1Q8NEM2 672 aa8□□□□□ -1.13
COPS4-209ENST00000511653 OR13H1Q8NG92 308 aa8□□□□□ -1.13
COPS4-209ENST00000511653 FBF1Q8TES7 1133 aa8□□□□□ -1.13
COPS4-209ENST00000511653 FERMT2Q96AC1 680 aa8□□□□□ -1.13
COPS4-209ENST00000511653 MAML3Q96JK9 1138 aa8□□□□□ -1.13
COPS4-209ENST00000511653 BCL11AQ9H165 835 aa8□□□□□ -1.13
COPS4-209ENST00000511653 PRDM5Q9NQX1 630 aaPredicted RBP8□□□□□ -1.13
COPS4-209ENST00000511653 PDLIM7Q9NR12 457 aa8□□□□□ -1.13
COPS4-209ENST00000511653 GTF3C5Q9Y5Q8 519 aaPredicted RBP8□□□□□ -1.13
COPS4-209ENST00000511653 GBF1Q92538 1859 aa8□□□□□ -1.13
COPS4-209ENST00000511653 BRWD1Q9NSI6 2320 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 TRIM43BA6NCK2 446 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 ZBTB42B2RXF5 422 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 SEPT4O43236 478 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 SORBS3O60504 671 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 FLOT1O75955 427 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 MBD4O95243 580 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 TCF3P15923 654 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 CES1P23141 567 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 ITGB8P26012 769 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 ADCYAP1R1P41586 468 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 HNRNPUQ00839 825 aaKnown RBP eCLIP7.99□□□□□ -1.13
COPS4-209ENST00000511653 ICA1Q05084 483 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 GAS6Q14393 721 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 TMEM132BQ14DG7 1078 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 LRRC41Q15345 812 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 FAM109BQ6ICB4 259 aaPredicted RBP7.99□□□□□ -1.13
COPS4-209ENST00000511653 SLC39A5Q6ZMH5 540 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 TMEM179Q6ZVK1 233 aa7.99□□□□□ -1.13
COPS4-209ENST00000511653 NCAPG2Q86XI2 1143 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms