RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ATL2Q8NHH9 583 aa4.77□□□□□ -1.65
TRAPPC11-207ENST00000511409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.77□□□□□ -1.65
TRAPPC11-207ENST00000511409 SHISA4Q96DD7 197 aa4.77□□□□□ -1.65
TRAPPC11-207ENST00000511409 LIN37Q96GY3 246 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-207ENST00000511409 INTS4Q96HW7 963 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-207ENST00000511409 PUS7Q96PZ0 661 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-207ENST00000511409 SLC6A17Q9H1V8 727 aa4.77□□□□□ -1.65
TRAPPC11-207ENST00000511409 RAPGEFL1Q9UHV5 662 aa4.77□□□□□ -1.65
TRAPPC11-207ENST00000511409 ZKSCAN5Q9Y2L8 839 aa4.77□□□□□ -1.65
TRAPPC11-207ENST00000511409 NOP58Q9Y2X3 529 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-207ENST00000511409 SIT1Q9Y3P8 196 aa4.77□□□□□ -1.65
TRAPPC11-207ENST00000511409 FAM83GA6ND36 823 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 CBX4O00257 560 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 WNT9AO14904 365 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 HGSO14964 777 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 SLC27A2O14975 620 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 NKRFO15226 690 aaKnown RBP eCLIP4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 CYBBP04839 570 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 CPEP16870 476 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 POU3F2P20265 443 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 JAM2P57087 298 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 IL2P60568 153 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 AMPD3Q01432 767 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 SEPT7Q16181 437 aaKnown RBP4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 SKOR2Q2VWA4 1001 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 STEAP3Q658P3 488 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 PAQR3Q6TCH7 311 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 MPZL3Q6UWV2 235 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 OVCH1Q7RTY7 1134 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 MILR1Q7Z6M3 343 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 PTRH1Q86Y79 214 aaKnown RBP4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 IRF2BP1Q8IU81 584 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 NETO2Q8NC67 525 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 CHST14Q8NCH0 376 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 OR2W6PQ8NHA6 318 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 SEC14L1Q92503 715 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 USP7Q93009 1102 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 PEX11GQ96HA9 241 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 KRTAP17-1Q9BYP8 105 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 TNFRSF12AQ9NP84 129 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 SLC6A20Q9NP91 592 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 DSEQ9UL01 958 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 NUB1Q9Y5A7 615 aa4.76□□□□□ -1.65
TRAPPC11-207ENST00000511409 PTPDC1A2A3K4 754 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 OR14I1A6ND48 311 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 ZNF891A8MT65 544 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 TRAF5O00463 557 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 TSPAN15O95858 294 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 MLANAQ16655 118 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 PRR23BQ6ZRT6 265 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 STRA8Q7Z7C7 330 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 RBM12BQ8IXT5 1001 aaKnown RBP4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 PPP1R16BQ96T49 567 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 FAM126AQ9BYI3 521 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 CD244Q9BZW8 370 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 MCM8Q9UJA3 840 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 PALD1Q9ULE6 856 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 ATP8A1Q9Y2Q0 1164 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 PCDHB4Q9Y5E5 795 aa4.75□□□□□ -1.65
TRAPPC11-207ENST00000511409 NCANO14594 1321 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 TCRBV5S4A2TA0A5A2 114 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 SLC12A8A0AV02 714 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 ZNF561-AS1K7EIQ3 104 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 HRKO00198 91 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 SCDO00767 359 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 SGSM2O43147 1006 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 SRGAP3O43295 1099 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 HIP1RO75146 1068 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 AMY2AP04746 511 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 AMY2BP19961 511 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 SLC6A11P48066 632 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 ERVFRD-1P60508 538 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 LACTBP83111 547 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 PRR5P85299 388 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 IRF9Q00978 393 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 TMEM62Q0P6H9 643 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 NR1I3Q14994 352 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 ARHGAP44Q17R89 818 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 RPTNQ6XPR3 784 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 ANKLE2Q86XL3 938 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 DDX42Q86XP3 938 aaKnown RBP eCLIP4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 KIF18BQ86Y91 864 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 C1QL4Q86Z23 238 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 SIAH1Q8IUQ4 282 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 NLGN4XQ8N0W4 816 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 AFAP1L2Q8N4X5 818 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 FBXO15Q8NCQ5 510 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 TOX2Q96NM4 488 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 GPR101Q96P66 508 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 TTC1Q99614 292 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 YIPF4Q9BSR8 244 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 BRINP2Q9C0B6 783 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 SMOC1Q9H4F8 434 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 SMURF1Q9HCE7 757 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 THG1LQ9NWX6 298 aaKnown RBP4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 MYOTQ9UBF9 498 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 B4GALT6Q9UBX8 382 aa4.74□□□□□ -1.65
TRAPPC11-207ENST00000511409 H7C1D1 291 aa4.73□□□□□ -1.65
TRAPPC11-207ENST00000511409 PEX10O60683 326 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms