RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 PCMTD1Q96MG8 357 aaPredicted RBP6.17□□□□□ -1.42
PROM1-211ENST00000511153 APBA2Q99767 749 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 CFHR5Q9BXR6 569 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 WDR11Q9BZH6 1224 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 ZMYND12Q9H0C1 365 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 FBXO40Q9UH90 709 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 TSR3Q9UJK0 312 aaKnown RBP6.17□□□□□ -1.42
PROM1-211ENST00000511153 PTPN22Q9Y2R2 807 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 DNAJC25-GNG10A0A024R161 153 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 SNAI1O95863 264 aaPredicted RBP6.16□□□□□ -1.42
PROM1-211ENST00000511153 NR3C2P08235 984 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 HOXD10P28358 340 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 GRK4P32298 578 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 COPB2P35606 906 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 ADCYAP1R1P41586 468 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 MRPS9P82933 396 aaKnown RBP6.16□□□□□ -1.42
PROM1-211ENST00000511153 ARHGAP4P98171 946 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 PGM5Q15124 567 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 SAFBQ15424 915 aaKnown RBP eCLIP6.16□□□□□ -1.42
PROM1-211ENST00000511153 LY6KQ17RY6 165 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 SLC9C1Q4G0N8 1177 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 PPP1R18Q6NYC8 613 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 TRMT1LQ7Z2T5 733 aaKnown RBP6.16□□□□□ -1.42
PROM1-211ENST00000511153 CTU1Q7Z7A3 348 aaKnown RBP6.16□□□□□ -1.42
PROM1-211ENST00000511153 FBXO18Q8NFZ0 1043 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 NSUN6Q8TEA1 469 aaKnown RBP6.16□□□□□ -1.42
PROM1-211ENST00000511153 CCDC12Q8WUD4 166 aaPredicted RBP6.16□□□□□ -1.42
PROM1-211ENST00000511153 SOCS4Q8WXH5 440 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 USP6NLQ92738 828 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 PDCD2LQ9BRP1 358 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 MCOLN1Q9GZU1 580 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 UNC93B1Q9H1C4 597 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 TFIP11Q9UBB9 837 aaKnown RBP6.16□□□□□ -1.42
PROM1-211ENST00000511153 MTMR6Q9Y217 621 aa6.16□□□□□ -1.42
PROM1-211ENST00000511153 SPTLC1O15269 473 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 ADCY6O43306 1168 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 STX6O43752 255 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 STRNO43815 780 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 SLC37A4O43826 429 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 EDIL3O43854 480 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 CCNT1O60563 726 aaKnown RBP6.15□□□□□ -1.42
PROM1-211ENST00000511153 ARIH2O95376 493 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 ARP10275 920 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 ITGB5P18084 799 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 NCLP19338 710 aaKnown RBP6.15□□□□□ -1.42
PROM1-211ENST00000511153 GNA11P29992 359 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 MCM7P33993 719 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 CACNB2Q08289 660 aaPredicted RBP6.15□□□□□ -1.42
PROM1-211ENST00000511153 NONOQ15233 471 aaKnown RBP eCLIP6.15□□□□□ -1.42
PROM1-211ENST00000511153 PRR16Q569H4 304 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 TINF2Q9BSI4 451 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 BRMS1Q9HCU9 246 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 SH3GLB2Q9NR46 395 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 ZDHHC9Q9Y397 364 aa6.15□□□□□ -1.42
PROM1-211ENST00000511153 LRRC37A2A6NM11 1700 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 A0A087WWV3 80 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ESYT2A0FGR8 921 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 FAM86B1E9PN63 330 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 M0R2N6 131 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 PIK3CDO00329 1044 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 DYNC1LI2O43237 492 aaPredicted RBP6.14□□□□□ -1.43
PROM1-211ENST00000511153 CHMP2AO43633 222 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ACTN4O43707 911 aaKnown RBP6.14□□□□□ -1.43
PROM1-211ENST00000511153 MARCH6O60337 910 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 RGS20O76081 388 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 PGK1P00558 417 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 FAM86B2P0C5J1 330 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 CCND2P30279 289 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 TOB1P50616 345 aaPredicted RBP6.14□□□□□ -1.43
PROM1-211ENST00000511153 BEX3Q00994 111 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 TRAF1Q13077 416 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 RESTQ13127 1097 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 SEMA3FQ13275 785 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ACVR2BQ13705 512 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ARHGEF6Q15052 776 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 CCDC144BQ3MJ40 725 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 MFSD14CQ5VZR4 134 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 OLFML2BQ68BL8 750 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 KRT25Q7Z3Z0 450 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 PLA2G4DQ86XP0 818 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ABRAQ8N0Z2 381 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 BICD2Q8TD16 824 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 TNFRSF25Q93038 417 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 INTS4Q96HW7 963 aaKnown RBP6.14□□□□□ -1.43
PROM1-211ENST00000511153 IPO9Q96P70 1041 aaKnown RBP6.14□□□□□ -1.43
PROM1-211ENST00000511153 GDPD2Q9HCC8 539 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ADD3Q9UEY8 706 aaKnown RBP6.14□□□□□ -1.43
PROM1-211ENST00000511153 CNPY2Q9Y2B0 182 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 SLC27A5Q9Y2P5 690 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 PCDHB6Q9Y5E3 794 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 CLIC4Q9Y696 253 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 RPTORQ8N122 1335 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ZNF236Q9UL36 1845 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 MYADML2A6NDP7 307 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ASB14A6NK59 587 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 hCG_1984214I3L0E3 225 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ATP9AO75110 1047 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 HMGCRP04035 888 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ZNF865P0CJ78 1059 aaPredicted RBP6.14□□□□□ -1.43
PROM1-211ENST00000511153 ZSCAN22P10073 491 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms