RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 CCDC88AQ3V6T2 1871 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 PRR33A8MZF0 331 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 H7C4K7 107 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 SMIM22K7EJ46 135 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 ATG13O75143 517 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 ADH1AP07327 375 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 HSP90AA1P07900 732 aaKnown RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 CYP2C9P11712 490 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 SMPD1P17405 629 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 MATR3P43243 847 aaKnown RBP eCLIP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 TRAPPC10P48553 1259 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 ADCY7P51828 1080 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 ATXN3P54252 364 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 CASP7P55210 303 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 NFX1Q12986 1120 aaKnown RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 BAATQ14032 418 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 FAM47AQ5JRC9 791 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 CEP68Q76N32 757 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 OTOP2Q7RTS6 562 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 METTL23Q86XA0 190 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 CMTR2Q8IYT2 770 aaKnown RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 TMEM57Q8N5G2 664 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 LEMD2Q8NC56 503 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 MKL1Q969V6 931 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 UPF3AQ9H1J1 476 aaKnown RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 MTMR4Q9NYA4 1195 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 SPG21Q9NZD8 308 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 IGSF9Q9P2J2 1179 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 NDUFB9Q9Y6M9 179 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 MAN2B1O00754 1011 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 KINO60870 393 aaKnown RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 KIF20AO95235 890 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 ATF7P17544 494 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 CCND3P30281 292 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 ADORA1P30542 326 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 PLA2G5P39877 138 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 PHKA2P46019 1235 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 ALDH1A3P47895 512 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 CCL23P55773 120 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 ARHGAP4P98171 946 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 SHHQ15465 462 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 ZRSR1Q15695 479 aaKnown RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 TREML2Q5T2D2 321 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 CC2D1AQ6P1N0 951 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 CXCL17Q6UXB2 119 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 C12orf50Q8NA57 414 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 FAM184AQ8NB25 1140 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 CCDC150Q8NCX0 1101 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 PNMA1Q8ND90 353 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 NEK9Q8TD19 979 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 SLC7A3Q8WY07 619 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 MRPL38Q96DV4 380 aaKnown RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 TEKT3Q9BXF9 490 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 GPR88Q9GZN0 384 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 UBE2ZQ9H832 354 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 SLC38A10Q9HBR0 1119 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 EMILIN3Q9NT22 766 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 TPCN1Q9ULQ1 816 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 NUP98P52948 1817 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 PNMA6FA0A0J9YX94 578 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 UPP2O95045 317 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 GGPS1O95749 300 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 BMP15O95972 392 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 EGFRP00533 1210 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 KRT18P05783 430 aaKnown RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 NR3C2P08235 984 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 GCFC2P16383 781 aaKnown RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 GJA5P36382 358 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 ALDH5A1P51649 535 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 LMNB2Q03252 620 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 TBC1D8BQ0IIM8 1120 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 MTMR3Q13615 1198 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 CYP4A22Q5TCH4 519 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 KIAA0319Q5VV43 1072 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 HOMER1Q86YM7 354 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 LRRC43Q8N309 656 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 CCDC82Q8N4S0 544 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 CSGALNACT1Q8TDX6 532 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 P2RX5Q93086 422 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 C2orf40Q9H1Z8 148 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 ALDH8A1Q9H2A2 487 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 TOPORSQ9NS56 1045 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 GJD2Q9UKL4 321 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 AKT3Q9Y243 479 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 ATP8B3O60423 1300 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 ADCY6O43306 1168 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 KCNA5P22460 613 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 AXLP30530 894 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 GBP2P32456 591 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 SMTNP53814 917 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 POLGP54098 1239 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 NLRP5P59047 1200 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 DYNLL1P63167 89 aaKnown RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 CYP4A11Q02928 519 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 HNRNPDQ14103 355 aaKnown RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 CDC37Q16543 378 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-209ENST00000511124 LRRC26Q2I0M4 334 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 LEXMQ3ZCV2 418 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 METTL7BQ6UX53 244 aa3.21□□□□□ -1.9
CLOCK-209ENST00000511124 EEPD1Q7L9B9 569 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms