RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 PDGFDQ9GZP0 370 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 PCDHB4Q9Y5E5 795 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 TCRBV16S1A1N1A0A5B0 115 aa9.87□□□□□ -0.83
TRAPPC11-206ENST00000509857 PFKLP17858 780 aa9.87□□□□□ -0.83
TRAPPC11-206ENST00000509857 KCNJ15Q99712 375 aa9.87□□□□□ -0.83
TRAPPC11-206ENST00000509857 MYOTQ9UBF9 498 aa9.87□□□□□ -0.83
TRAPPC11-206ENST00000509857 SMG5Q9UPR3 1016 aaKnown RBP9.87□□□□□ -0.83
TRAPPC11-206ENST00000509857 TMA7Q9Y2S6 64 aaKnown RBP9.87□□□□□ -0.83
TRAPPC11-206ENST00000509857 ATF2P15336 505 aa9.86□□□□□ -0.83
TRAPPC11-206ENST00000509857 NCKAP1LP55160 1127 aa9.86□□□□□ -0.83
TRAPPC11-206ENST00000509857 ZNF124Q15973 351 aa9.86□□□□□ -0.83
TRAPPC11-206ENST00000509857 ETV3LQ6ZN32 361 aa9.86□□□□□ -0.83
TRAPPC11-206ENST00000509857 C16orf59Q7L2K0 433 aa9.86□□□□□ -0.83
TRAPPC11-206ENST00000509857 KIAA0907Q7Z7F0 614 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC11-206ENST00000509857 FAM126BQ8IXS8 530 aa9.86□□□□□ -0.83
TRAPPC11-206ENST00000509857 ASH2LQ9UBL3 628 aa9.86□□□□□ -0.83
TRAPPC11-206ENST00000509857 CUL7Q14999 1698 aa9.86□□□□□ -0.83
TRAPPC11-206ENST00000509857 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 BUB1BO60566 1050 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 CKMP06732 381 aa9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 CACNB2Q08289 660 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 KCNA10Q16322 511 aa9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 TKFCQ3LXA3 575 aa9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 B3GNT8Q7Z7M8 397 aa9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 ZC3H7AQ8IWR0 971 aaKnown RBP9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 TMEFF1Q8IYR6 380 aa9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 TTLL11Q8NHH1 800 aa9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 PANK1Q8TE04 598 aa9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 IRAK3Q9Y616 596 aa9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 CARMIL1Q5VZK9 1371 aa9.85□□□□□ -0.83
TRAPPC11-206ENST00000509857 NKRFO15226 690 aaKnown RBP eCLIP9.84□□□□□ -0.83
TRAPPC11-206ENST00000509857 DNAJC8O75937 253 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC11-206ENST00000509857 APPP05067 770 aa9.84□□□□□ -0.83
TRAPPC11-206ENST00000509857 COL6A2P12110 1019 aa9.84□□□□□ -0.83
TRAPPC11-206ENST00000509857 KCNA6P17658 529 aa9.84□□□□□ -0.83
TRAPPC11-206ENST00000509857 PABPC4Q13310 644 aaKnown RBP eCLIP9.84□□□□□ -0.83
TRAPPC11-206ENST00000509857 FAM47CQ5HY64 1035 aa9.84□□□□□ -0.83
TRAPPC11-206ENST00000509857 FEZ1Q99689 392 aa9.84□□□□□ -0.83
TRAPPC11-206ENST00000509857 CELF4Q9BZC1 486 aaKnown RBP9.84□□□□□ -0.83
TRAPPC11-206ENST00000509857 NUB1Q9Y5A7 615 aa9.84□□□□□ -0.83
TRAPPC11-206ENST00000509857 CD2APQ9Y5K6 639 aa9.84□□□□□ -0.83
TRAPPC11-206ENST00000509857 WDR97A6NE52 1622 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 GSTA4O15217 222 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 NPTXRO95502 500 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 SRGAP2CP0DJJ0 459 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 EPHA5P54756 1037 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 LINC00310P59036 64 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 SSPNQ14714 243 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 GPR19Q15760 415 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 PLEKHG4Q58EX7 1191 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 TRIM48Q8IWZ4 208 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 ARRDC4Q8NCT1 418 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 GOLGA2P5Q9HBQ8 144 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 EPB41L4AQ9HCS5 686 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 DSEQ9UL01 958 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 CBLCQ9ULV8 474 aa9.83□□□□□ -0.84
TRAPPC11-206ENST00000509857 MAP3K1Q13233 1512 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 TCRBV5S4A2TA0A5A2 114 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 CCDC66A2RUB6 948 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 ZNF561-AS1K7EIQ3 104 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 SLC27A2O14975 620 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 C8BP07358 591 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 PYGMP11217 842 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 MC3RP41968 323 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 ABHD17CQ6PCB6 329 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 ANKLE2Q86XL3 938 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 SH3RF2Q8TEC5 729 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 INTS7Q9NVH2 962 aaKnown RBP9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 HSPBP1Q9NZL4 362 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 CNOT6Q9ULM6 557 aaKnown RBP9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 KCTD3Q9Y597 815 aa9.82□□□□□ -0.84
TRAPPC11-206ENST00000509857 NPIPB6E9PJ23 425 aa9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 ASLP04424 464 aa9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 AMY2AP04746 511 aa9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 PDE6AP16499 860 aa9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 AMY2BP19961 511 aa9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 LACTBP83111 547 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 FAM129CQ86XR2 697 aa9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 NINJ1Q92982 152 aa9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 KRTAP4-12Q9BQ66 201 aa9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 NGRNQ9NPE2 291 aaKnown RBP9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 DTLQ9NZJ0 730 aa9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 MAGEC2Q9UBF1 373 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 PLAAQ9Y263 795 aa9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 NESP48681 1621 aa9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 URB2Q14146 1524 aaKnown RBP9.81□□□□□ -0.84
TRAPPC11-206ENST00000509857 DBX1A6NMT0 343 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 B4E1Z4 1266 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 PI3P19957 117 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 SDSP20132 328 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 IGFALSP35858 605 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 ST5P78524 1137 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 FOXO4P98177 505 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 TUSC3Q13454 348 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 SDE2Q6IQ49 451 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 ARHGAP36Q6ZRI8 547 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 KCTD1Q719H9 257 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 PCDH18Q9HCL0 1135 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 CATSPERZQ9NTU4 200 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 SRPK3Q9UPE1 567 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms