RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 PPP2R3CQ969Q6 453 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
MBD4-208ENST00000509828 PDCD2LQ9BRP1 358 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 RNPEPQ9H4A4 650 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 SETD4Q9NVD3 440 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 MAP3K20Q9NYL2 800 aaKnown RBP12.02□□□□□ -0.49
MBD4-208ENST00000509828 RWDD3Q9Y3V2 267 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 ZMYM6O95789 1325 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 NEDD4P46934 1319 aa12.02□□□□□ -0.49
MBD4-208ENST00000509828 B4E1Z4 1266 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 GCOM1H8Y6P7 765 aaPredicted RBP12.01□□□□□ -0.49
MBD4-208ENST00000509828 RBAK-RBAKDNI3L0D1 243 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 CAND2O75155 1236 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 LGALS2P05162 132 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 RB1P06400 928 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 POLR2MP0CAP2 368 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 UBA1P22314 1058 aaKnown RBP12.01□□□□□ -0.49
MBD4-208ENST00000509828 IRS1P35568 1242 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 NT5C2P49902 561 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 HSD17B4P51659 736 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 ARHGAP4P98171 946 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 HIC1Q14526 733 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 PGM5Q15124 567 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 IFIT1BQ5T764 474 aaKnown RBP12.01□□□□□ -0.49
MBD4-208ENST00000509828 HFE2Q6ZVN8 426 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 VSIG10LQ86VR7 867 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 TICAM2Q86XR7 235 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 C16orf70Q9BSU1 422 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 USP26Q9BXU7 913 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 KRT23Q9C075 422 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 LMAN2LQ9H0V9 348 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 ZNF215Q9UL58 517 aaPredicted RBP12.01□□□□□ -0.49
MBD4-208ENST00000509828 PIEZO1Q92508 2521 aa12.01□□□□□ -0.49
MBD4-208ENST00000509828 KLRF2D3W0D1 207 aa12□□□□□ -0.49
MBD4-208ENST00000509828 STXBP3O00186 592 aa12□□□□□ -0.49
MBD4-208ENST00000509828 BMPR1AP36894 532 aa12□□□□□ -0.49
MBD4-208ENST00000509828 NDUFV1P49821 464 aa12□□□□□ -0.49
MBD4-208ENST00000509828 SP2Q02086 613 aa12□□□□□ -0.49
MBD4-208ENST00000509828 SP4Q02446 784 aa12□□□□□ -0.49
MBD4-208ENST00000509828 BTG3Q14201 252 aaPredicted RBP12□□□□□ -0.49
MBD4-208ENST00000509828 NEDD9Q14511 834 aa12□□□□□ -0.49
MBD4-208ENST00000509828 IMMTQ16891 758 aaKnown RBP12□□□□□ -0.49
MBD4-208ENST00000509828 STOX1Q6ZVD7 989 aa12□□□□□ -0.49
MBD4-208ENST00000509828 RSPH3Q86UC2 560 aa12□□□□□ -0.49
MBD4-208ENST00000509828 SAMD3Q8N6K7 520 aa12□□□□□ -0.49
MBD4-208ENST00000509828 DIAPH3Q9NSV4 1193 aa12□□□□□ -0.49
MBD4-208ENST00000509828 MUTYHQ9UIF7 546 aa12□□□□□ -0.49
MBD4-208ENST00000509828 CD207Q9UJ71 328 aa12□□□□□ -0.49
MBD4-208ENST00000509828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.99□□□□□ -0.49
MBD4-208ENST00000509828 C19orf67A6NJJ6 358 aa11.99□□□□□ -0.49
MBD4-208ENST00000509828 ZBTB5O15062 677 aa11.99□□□□□ -0.49
MBD4-208ENST00000509828 GRM6O15303 877 aa11.99□□□□□ -0.49
MBD4-208ENST00000509828 RGS20O76081 388 aa11.99□□□□□ -0.49
MBD4-208ENST00000509828 HOXD8P13378 290 aaPredicted RBP11.99□□□□□ -0.49
MBD4-208ENST00000509828 SMAD2Q15796 467 aaKnown RBP11.99□□□□□ -0.49
MBD4-208ENST00000509828 CYFIP1Q7L576 1253 aa11.99□□□□□ -0.49
MBD4-208ENST00000509828 RNF135Q8IUD6 432 aa11.99□□□□□ -0.49
MBD4-208ENST00000509828 SUGP1Q8IWZ8 645 aaKnown RBP11.99□□□□□ -0.49
MBD4-208ENST00000509828 ENAHQ8N8S7 591 aaPredicted RBP11.99□□□□□ -0.49
MBD4-208ENST00000509828 ANKS1AQ92625 1134 aa11.99□□□□□ -0.49
MBD4-208ENST00000509828 PBXIP1Q96AQ6 731 aa11.99□□□□□ -0.49
MBD4-208ENST00000509828 CNNM2Q9H8M5 875 aa11.99□□□□□ -0.49
MBD4-208ENST00000509828 ZSWIM5Q9P217 1185 aa11.99□□□□□ -0.49
MBD4-208ENST00000509828 MBTPS2O43462 519 aa11.98□□□□□ -0.49
MBD4-208ENST00000509828 GHRP10912 638 aa11.98□□□□□ -0.49
MBD4-208ENST00000509828 SDSP20132 328 aa11.98□□□□□ -0.49
MBD4-208ENST00000509828 HYAL1Q12794 435 aa11.98□□□□□ -0.49
MBD4-208ENST00000509828 SMAD4Q13485 552 aaKnown RBP11.98□□□□□ -0.49
MBD4-208ENST00000509828 CWC27Q6UX04 472 aaKnown RBP11.98□□□□□ -0.49
MBD4-208ENST00000509828 STAG2Q8N3U4 1231 aa11.98□□□□□ -0.49
MBD4-208ENST00000509828 IL31RAQ8NI17 732 aa11.98□□□□□ -0.49
MBD4-208ENST00000509828 GPKOWQ92917 476 aaPredicted RBP eCLIP11.98□□□□□ -0.492e-7■■■□□ 18.7
MBD4-208ENST00000509828 RTEL1Q9NZ71 1219 aa11.98□□□□□ -0.49
MBD4-208ENST00000509828 PTPRSQ13332 1948 aa11.98□□□□□ -0.49
MBD4-208ENST00000509828 SIP14410 1827 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 BRWD1Q9NSI6 2320 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 SALL3Q9BXA9 1300 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 IBSPP21815 317 aaPredicted RBP11.97□□□□□ -0.49
MBD4-208ENST00000509828 LTBRP36941 435 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
MBD4-208ENST00000509828 PKN1Q16512 942 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 HERC4Q5GLZ8 1057 aaPredicted RBP11.97□□□□□ -0.49
MBD4-208ENST00000509828 METTL7BQ6UX53 244 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 MICAL1Q8TDZ2 1067 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 PIBF1Q8WXW3 757 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 EDAQ92838 391 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 CUL5Q93034 780 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 PIGSQ96S52 555 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 PRRX2Q99811 253 aa11.97□□□□□ -0.49
MBD4-208ENST00000509828 ALG13Q9NP73 1137 aaKnown RBP11.97□□□□□ -0.49
MBD4-208ENST00000509828 ADGRA3Q8IWK6 1321 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 NRCAMQ92823 1304 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 ERICH2A1L162 156 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 TMEM221A6NGB7 291 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 C5orf67F2Z3F1 127 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 M0R296 226 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 HIP1O00291 1037 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 ENPP3O14638 875 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 OPLAHO14841 1288 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms