RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 RTEL1Q9NZ71 1219 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 FRMPD4Q14CM0 1322 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 SPATA31C2B4DYI2 1134 aa18.46■□□□□ 0.55
RAB40C-202ENST00000509637 E7EWF7 191 aa18.46■□□□□ 0.55
RAB40C-202ENST00000509637 H3BRB1 525 aa18.46■□□□□ 0.55
RAB40C-202ENST00000509637 GCOM1H8Y6P7 765 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-202ENST00000509637 IFIT3O14879 490 aaKnown RBP18.46■□□□□ 0.55
RAB40C-202ENST00000509637 PARNO95453 639 aaKnown RBP18.46■□□□□ 0.55
RAB40C-202ENST00000509637 POLR2MP0CAP2 368 aa18.46■□□□□ 0.55
RAB40C-202ENST00000509637 THPOP40225 353 aa18.46■□□□□ 0.55
RAB40C-202ENST00000509637 IL27Q8NEV9 243 aa18.46■□□□□ 0.55
RAB40C-202ENST00000509637 SP7Q8TDD2 431 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-202ENST00000509637 YTHDC1Q96MU7 727 aaKnown RBP18.46■□□□□ 0.55
RAB40C-202ENST00000509637 INPP4AQ96PE3 977 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-202ENST00000509637 TGS1Q96RS0 853 aaKnown RBP18.46■□□□□ 0.55
RAB40C-202ENST00000509637 LRFN3Q9BTN0 628 aa18.46■□□□□ 0.55
RAB40C-202ENST00000509637 TUT1Q9H6E5 874 aaKnown RBP18.46■□□□□ 0.55
RAB40C-202ENST00000509637 SETD4Q9NVD3 440 aa18.46■□□□□ 0.55
RAB40C-202ENST00000509637 PNMA6FA0A0J9YX94 578 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 RSPH10B2B2RC85 870 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 RSPH10BP0C881 870 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 TGFB3P10600 412 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 CCND2P30279 289 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 ICAM3P32942 547 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 AAK1Q2M2I8 961 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 USP17L6PQ6QN14 398 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 SAMD3Q8N6K7 520 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.45■□□□□ 0.54
RAB40C-202ENST00000509637 ATP6V0A1Q93050 837 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 GPR20Q99678 358 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 MYL10Q9BUA6 226 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 LMCD1Q9NZU5 365 aa18.45■□□□□ 0.54
RAB40C-202ENST00000509637 KCNV1Q6PIU1 500 aa18.44■□□□□ 0.54
RAB40C-202ENST00000509637 CYFIP1Q7L576 1253 aa18.44■□□□□ 0.54
RAB40C-202ENST00000509637 MB21D2Q8IYB1 491 aaPredicted RBP18.44■□□□□ 0.54
RAB40C-202ENST00000509637 MLXIPQ9HAP2 919 aa18.44■□□□□ 0.54
RAB40C-202ENST00000509637 C17orf102A2RUQ5 167 aa18.43■□□□□ 0.54
RAB40C-202ENST00000509637 MEIS2O14770 477 aa18.43■□□□□ 0.54
RAB40C-202ENST00000509637 ATP9AO75110 1047 aa18.43■□□□□ 0.54
RAB40C-202ENST00000509637 CTSHP09668 335 aa18.43■□□□□ 0.54
RAB40C-202ENST00000509637 LINC00271P0C7V0 271 aa18.43■□□□□ 0.54
RAB40C-202ENST00000509637 MYOCDQ8IZQ8 938 aa18.43■□□□□ 0.54
RAB40C-202ENST00000509637 UBE2ZQ9H832 354 aaPredicted RBP18.43■□□□□ 0.54
RAB40C-202ENST00000509637 TOP1MTQ969P6 601 aa18.42■□□□□ 0.54
RAB40C-202ENST00000509637 INSL6Q9Y581 213 aa18.42■□□□□ 0.54
RAB40C-202ENST00000509637 ATG2AQ2TAZ0 1938 aa18.42■□□□□ 0.54
RAB40C-202ENST00000509637 FAM86C2PA6NEL3 165 aa18.41■□□□□ 0.54
RAB40C-202ENST00000509637 SGSM2O43147 1006 aa18.41■□□□□ 0.54
RAB40C-202ENST00000509637 PLEKHA8P1O95397 391 aa18.41■□□□□ 0.54
RAB40C-202ENST00000509637 CHRNA1P02708 482 aa18.41■□□□□ 0.54
RAB40C-202ENST00000509637 IL9P15248 144 aa18.41■□□□□ 0.54
RAB40C-202ENST00000509637 WTAPQ15007 396 aa18.41■□□□□ 0.54
RAB40C-202ENST00000509637 EPC2Q52LR7 807 aa18.41■□□□□ 0.54
RAB40C-202ENST00000509637 UTP14CQ5TAP6 766 aaKnown RBP18.41■□□□□ 0.54
RAB40C-202ENST00000509637 METTL7BQ6UX53 244 aa18.41■□□□□ 0.54
RAB40C-202ENST00000509637 RUFY4Q6ZNE9 571 aa18.41■□□□□ 0.54
RAB40C-202ENST00000509637 CMTR1Q8N1G2 835 aaKnown RBP18.41■□□□□ 0.54
RAB40C-202ENST00000509637 SRBD1Q8N5C6 995 aaKnown RBP18.41■□□□□ 0.54
RAB40C-202ENST00000509637 ZBTB10Q96DT7 871 aa18.41■□□□□ 0.54
RAB40C-202ENST00000509637 LY9Q9HBG7 655 aa18.41■□□□□ 0.54
RAB40C-202ENST00000509637 EFCAB14O75071 495 aa18.4■□□□□ 0.54
RAB40C-202ENST00000509637 UPP2O95045 317 aa18.4■□□□□ 0.54
RAB40C-202ENST00000509637 SP4Q02446 784 aa18.4■□□□□ 0.54
RAB40C-202ENST00000509637 FAM26DQ5JW98 314 aa18.4■□□□□ 0.54
RAB40C-202ENST00000509637 FBXO22Q8NEZ5 403 aa18.4■□□□□ 0.54
RAB40C-202ENST00000509637 LMBR1Q8WVP7 490 aa18.4■□□□□ 0.54
RAB40C-202ENST00000509637 MAP4K1Q92918 833 aa18.4■□□□□ 0.54
RAB40C-202ENST00000509637 U3KPZ7 1027 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-202ENST00000509637 COL4A6Q14031 1691 aa18.39■□□□□ 0.53
RAB40C-202ENST00000509637 GSTTP1A0A1W2PQM5 241 aa18.39■□□□□ 0.53
RAB40C-202ENST00000509637 hCG_1642624A0A1W2PR95 340 aa18.39■□□□□ 0.53
RAB40C-202ENST00000509637 KCNA5P22460 613 aa18.39■□□□□ 0.53
RAB40C-202ENST00000509637 PLA2G5P39877 138 aa18.39■□□□□ 0.53
RAB40C-202ENST00000509637 LEXMQ3ZCV2 418 aa18.39■□□□□ 0.53
RAB40C-202ENST00000509637 RAB11FIP4Q86YS3 637 aa18.39■□□□□ 0.53
RAB40C-202ENST00000509637 FAM178BQ8IXR5 827 aa18.39■□□□□ 0.53
RAB40C-202ENST00000509637 NCOA7Q8NI08 942 aa18.39■□□□□ 0.53
RAB40C-202ENST00000509637 C1QTNF1Q9BXJ1 281 aa18.39■□□□□ 0.53
RAB40C-202ENST00000509637 EMSYQ7Z589 1322 aa18.39■□□□□ 0.53
RAB40C-202ENST00000509637 FIBPO43427 364 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 AMHP03971 560 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 KCNA2P16389 499 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 ITGB5P18084 799 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 RXRAP19793 462 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 MGAT3Q09327 533 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 TRDNQ13061 729 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 MARCH8Q5T0T0 291 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 PCNX4Q63HM2 1172 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 ZNF654Q8IZM8 581 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 SEPT8Q92599 483 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 MRPL38Q96DV4 380 aaKnown RBP18.38■□□□□ 0.53
RAB40C-202ENST00000509637 PCYT2Q99447 389 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 SPZ1Q9BXG8 430 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 USP26Q9BXU7 913 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 EHMT1Q9H9B1 1298 aa18.38■□□□□ 0.53
RAB40C-202ENST00000509637 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
RAB40C-202ENST00000509637 NLRC5Q86WI3 1866 aa18.37■□□□□ 0.53
RAB40C-202ENST00000509637 PI4K2BG5E9Z4 385 aa18.37■□□□□ 0.53
RAB40C-202ENST00000509637 H3BNC9 293 aa18.37■□□□□ 0.53
RAB40C-202ENST00000509637 NEDD9Q14511 834 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms