RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PSTPIP2Q9H939 334 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 ABHD14A-ACY1A0A1B0GW23 586 aa17.71■□□□□ 0.43
TPM3-219ENST00000509409 LGALS2P05162 132 aa17.71■□□□□ 0.43
TPM3-219ENST00000509409 MRPS5P82675 430 aaKnown RBP17.71■□□□□ 0.43
TPM3-219ENST00000509409 SP4Q02446 784 aa17.71■□□□□ 0.43
TPM3-219ENST00000509409 HIC1Q14526 733 aa17.71■□□□□ 0.43
TPM3-219ENST00000509409 NECTIN1Q15223 517 aa17.71■□□□□ 0.43
TPM3-219ENST00000509409 TRIM71Q2Q1W2 868 aaKnown RBP17.71■□□□□ 0.43
TPM3-219ENST00000509409 XRRA1Q6P2D8 792 aa17.71■□□□□ 0.43
TPM3-219ENST00000509409 METTL7BQ6UX53 244 aa17.71■□□□□ 0.43
TPM3-219ENST00000509409 IL27Q8NEV9 243 aa17.71■□□□□ 0.43
TPM3-219ENST00000509409 WNT8BQ93098 351 aa17.71■□□□□ 0.43
TPM3-219ENST00000509409 SCN5AQ14524 2016 aa17.71■□□□□ 0.42
TPM3-219ENST00000509409 hCG_1642624A0A1W2PR95 340 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 RSPH10B2B2RC85 870 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 PIK3CDO00329 1044 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 MEIS2O14770 477 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 EFCAB14O75071 495 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 RSPH10BP0C881 870 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 SMIM10L2AP0DMW4 78 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 SMIM10L2BP0DMW5 78 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 DEFB103AP81534 67 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 TAP1Q03518 808 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 SEMA3FQ13275 785 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 RNF20Q5VTR2 975 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 PCNX4Q63HM2 1172 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 TMCO2Q7Z6W1 182 aaPredicted RBP17.7■□□□□ 0.42
TPM3-219ENST00000509409 GPR20Q99678 358 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 RNPEPQ9H4A4 650 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 KIAA1217Q5T5P2 1943 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 FRMPD4Q14CM0 1322 aa17.7■□□□□ 0.42
TPM3-219ENST00000509409 CHD9Q3L8U1 2897 aa17.69■□□□□ 0.42
TPM3-219ENST00000509409 TREHO43280 583 aa17.69■□□□□ 0.42
TPM3-219ENST00000509409 LGR5O75473 907 aa17.69■□□□□ 0.42
TPM3-219ENST00000509409 GNAT1P11488 350 aa17.69■□□□□ 0.42
TPM3-219ENST00000509409 COL9A3Q14050 684 aaPredicted RBP17.69■□□□□ 0.42
TPM3-219ENST00000509409 FAM117BQ6P1L5 589 aa17.69■□□□□ 0.42
TPM3-219ENST00000509409 SERINC5Q86VE9 423 aa17.69■□□□□ 0.42
TPM3-219ENST00000509409 FANCBQ8NB91 859 aa17.69■□□□□ 0.42
TPM3-219ENST00000509409 ASB2Q96Q27 587 aa17.69■□□□□ 0.42
TPM3-219ENST00000509409 ZNF215Q9UL58 517 aaPredicted RBP17.69■□□□□ 0.42
TPM3-219ENST00000509409 EPOPA6NHQ4 379 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 ARHGEF15O94989 841 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 VCANP13611 3396 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 UBE2SQ16763 222 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 TCTN1Q2MV58 587 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 TRAF7Q6Q0C0 670 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 HEATR3Q7Z4Q2 680 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 SKAP1Q86WV1 359 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 MICU3Q86XE3 530 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 GIMAP8Q8ND71 665 aaPredicted RBP17.68■□□□□ 0.42
TPM3-219ENST00000509409 NEK1Q96PY6 1258 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 RAD9AQ99638 391 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 SENP7Q9BQF6 1050 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 SETD4Q9NVD3 440 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 MTCH2Q9Y6C9 303 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 EMSYQ7Z589 1322 aa17.68■□□□□ 0.42
TPM3-219ENST00000509409 SPDYE3A6NKU9 549 aa17.67■□□□□ 0.42
TPM3-219ENST00000509409 MBTPS1Q14703 1052 aa17.67■□□□□ 0.42
TPM3-219ENST00000509409 BMP2KLQ5H9B9 411 aa17.67■□□□□ 0.42
TPM3-219ENST00000509409 TMTC3Q6ZXV5 915 aa17.67■□□□□ 0.42
TPM3-219ENST00000509409 CENPQQ7L2Z9 268 aaPredicted RBP17.67■□□□□ 0.42
TPM3-219ENST00000509409 DBF4BQ8NFT6 615 aa17.67■□□□□ 0.42
TPM3-219ENST00000509409 CDHR1Q96JP9 859 aa17.67■□□□□ 0.42
TPM3-219ENST00000509409 TRIP12Q14669 1992 aaPredicted RBP17.67■□□□□ 0.42
TPM3-219ENST00000509409 MYH7BA7E2Y1 1941 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 LCHNA4D1U4 455 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 GJB5O95377 273 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 ARHGAP4P98171 946 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 KRT40Q6A162 431 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 SGMS1Q86VZ5 419 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 TRIM50Q86XT4 487 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 GPRASP2Q96D09 838 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 EHMT1Q9H9B1 1298 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 PKD2L1Q9P0L9 805 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 PCDHA6Q9UN73 950 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 TELO2Q9Y4R8 837 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 PCDHA8Q9Y5H6 950 aa17.66■□□□□ 0.42
TPM3-219ENST00000509409 TET1Q8NFU7 2136 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 RBAK-RBAKDNI3L0D1 243 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 TNFRSF10AO00220 468 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 ATP9AO75110 1047 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 AMHP03971 560 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 CTSHP09668 335 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 POU3F3P20264 500 aaPredicted RBP17.65■□□□□ 0.42
TPM3-219ENST00000509409 GRB10Q13322 594 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.65■□□□□ 0.422e-6■■□□□ 14.5
TPM3-219ENST00000509409 MYOCDQ8IZQ8 938 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 SEPT1Q8WYJ6 367 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 SEPT8Q92599 483 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 TCEANC2Q96MN5 208 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 RBM28Q9NW13 759 aaKnown RBP17.65■□□□□ 0.42
TPM3-219ENST00000509409 MTUS1Q9ULD2 1270 aa17.65■□□□□ 0.42
TPM3-219ENST00000509409 NAP1L2Q9ULW6 460 aaPredicted RBP17.65■□□□□ 0.42
TPM3-219ENST00000509409 HOXC8P31273 242 aa17.64■□□□□ 0.41
TPM3-219ENST00000509409 TCF7P36402 384 aaPredicted RBP17.64■□□□□ 0.41
TPM3-219ENST00000509409 MTMR1Q13613 665 aa17.64■□□□□ 0.41
TPM3-219ENST00000509409 DHX32Q7L7V1 743 aaKnown RBP17.64■□□□□ 0.41
TPM3-219ENST00000509409 SPRED2Q7Z698 418 aa17.64■□□□□ 0.41
TPM3-219ENST00000509409 TGS1Q96RS0 853 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms