RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 NR2E3Q9Y5X4 410 aa22.95■■□□□ 1.26
HOXC6-204ENST00000509328 NOP56O00567 594 aaKnown RBP22.94■■□□□ 1.26
HOXC6-204ENST00000509328 PPFIA4O75335 1185 aa22.94■■□□□ 1.26
HOXC6-204ENST00000509328 TRIM60Q495X7 471 aa22.94■■□□□ 1.26
HOXC6-204ENST00000509328 C7orf61Q8IZ16 206 aa22.94■■□□□ 1.26
HOXC6-204ENST00000509328 AGO4Q9HCK5 861 aaKnown RBP22.94■■□□□ 1.26
HOXC6-204ENST00000509328 PKD2L1Q9P0L9 805 aa22.94■■□□□ 1.26
HOXC6-204ENST00000509328 ATP11BQ9Y2G3 1177 aa22.94■■□□□ 1.26
HOXC6-204ENST00000509328 KIF3AQ9Y496 699 aa22.94■■□□□ 1.26
HOXC6-204ENST00000509328 NFASCO94856 1347 aa22.93■■□□□ 1.26
HOXC6-204ENST00000509328 MROH7Q68CQ1 1323 aa22.93■■□□□ 1.26
HOXC6-204ENST00000509328 ARVCFO00192 962 aa22.93■■□□□ 1.26
HOXC6-204ENST00000509328 EDIL3O43854 480 aa22.93■■□□□ 1.26
HOXC6-204ENST00000509328 ITGA7Q13683 1181 aa22.93■■□□□ 1.26
HOXC6-204ENST00000509328 SAFBQ15424 915 aaKnown RBP eCLIP22.93■■□□□ 1.26
HOXC6-204ENST00000509328 INF2Q27J81 1249 aa22.93■■□□□ 1.26
HOXC6-204ENST00000509328 DIS3L2Q8IYB7 885 aaKnown RBP22.93■■□□□ 1.26
HOXC6-204ENST00000509328 TNFRSF25Q93038 417 aa22.93■■□□□ 1.26
HOXC6-204ENST00000509328 GPR20Q99678 358 aa22.93■■□□□ 1.26
HOXC6-204ENST00000509328 SDF4Q9BRK5 362 aa22.93■■□□□ 1.26
HOXC6-204ENST00000509328 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.93■■□□□ 1.26
HOXC6-204ENST00000509328 CDK7P50613 346 aa22.92■■□□□ 1.26
HOXC6-204ENST00000509328 PSMC6P62333 389 aa22.92■■□□□ 1.26
HOXC6-204ENST00000509328 NR5A1Q13285 461 aa22.92■■□□□ 1.26
HOXC6-204ENST00000509328 PRR16Q569H4 304 aa22.92■■□□□ 1.26
HOXC6-204ENST00000509328 MOXD1Q6UVY6 613 aa22.92■■□□□ 1.26
HOXC6-204ENST00000509328 PIK3AP1Q6ZUJ8 805 aa22.92■■□□□ 1.26
HOXC6-204ENST00000509328 ANKRD33Q7Z3H0 272 aa22.92■■□□□ 1.26
HOXC6-204ENST00000509328 SLC43A3Q8NBI5 491 aa22.92■■□□□ 1.26
HOXC6-204ENST00000509328 FBXO18Q8NFZ0 1043 aa22.92■■□□□ 1.26
HOXC6-204ENST00000509328 TOX2Q96NM4 488 aa22.92■■□□□ 1.26
HOXC6-204ENST00000509328 GRIN2DO15399 1336 aa22.91■■□□□ 1.26
HOXC6-204ENST00000509328 CYP3A7-CYP3A51PA0A087WV96 503 aa22.91■■□□□ 1.26
HOXC6-204ENST00000509328 BTBD18B2RXH4 712 aa22.91■■□□□ 1.26
HOXC6-204ENST00000509328 CYP3A7P24462 503 aa22.91■■□□□ 1.26
HOXC6-204ENST00000509328 GUCY1B3Q02153 619 aa22.91■■□□□ 1.26
HOXC6-204ENST00000509328 TLE2Q04725 743 aa22.91■■□□□ 1.26
HOXC6-204ENST00000509328 CUL4AQ13619 759 aa22.91■■□□□ 1.26
HOXC6-204ENST00000509328 NEK8Q86SG6 692 aa22.91■■□□□ 1.26
HOXC6-204ENST00000509328 JPH1Q9HDC5 661 aaPredicted RBP22.91■■□□□ 1.26
HOXC6-204ENST00000509328 SMC3Q9UQE7 1217 aa22.91■■□□□ 1.26
HOXC6-204ENST00000509328 PQBP1O60828 265 aaKnown RBP22.9■■□□□ 1.26
HOXC6-204ENST00000509328 ZNF286BP0CG31 522 aa22.9■■□□□ 1.26
HOXC6-204ENST00000509328 GJB2P29033 226 aa22.9■■□□□ 1.26
HOXC6-204ENST00000509328 SP4Q02446 784 aa22.9■■□□□ 1.26
HOXC6-204ENST00000509328 ITGB3BPQ13352 177 aaPredicted RBP22.9■■□□□ 1.26
HOXC6-204ENST00000509328 KAT2BQ92831 832 aa22.9■■□□□ 1.26
HOXC6-204ENST00000509328 SNX21Q969T3 373 aa22.9■■□□□ 1.26
HOXC6-204ENST00000509328 LENG9Q96B70 501 aa22.9■■□□□ 1.26
HOXC6-204ENST00000509328 ZNF577Q9BSK1 485 aa22.9■■□□□ 1.26
HOXC6-204ENST00000509328 KATNAL1Q9BW62 490 aa22.9■■□□□ 1.26
HOXC6-204ENST00000509328 SLC9A2Q9UBY0 812 aa22.9■■□□□ 1.26
HOXC6-204ENST00000509328 DCDC2CA8MYV0 355 aa22.89■■□□□ 1.25
HOXC6-204ENST00000509328 IPO5O00410 1097 aaKnown RBP22.89■■□□□ 1.25
HOXC6-204ENST00000509328 F2P00734 622 aa22.89■■□□□ 1.25
HOXC6-204ENST00000509328 LETM2Q2VYF4 491 aa22.89■■□□□ 1.25
HOXC6-204ENST00000509328 NBPF20Q3BBV1 942 aa22.89■■□□□ 1.25
HOXC6-204ENST00000509328 Q4G0T1 1027 aa22.89■■□□□ 1.25
HOXC6-204ENST00000509328 EARS2Q5JPH6 523 aaKnown RBP22.89■■□□□ 1.25
HOXC6-204ENST00000509328 SEPT1Q8WYJ6 367 aa22.89■■□□□ 1.25
HOXC6-204ENST00000509328 MBOAT7Q96N66 472 aa22.89■■□□□ 1.25
HOXC6-204ENST00000509328 NAP1L4Q99733 375 aaKnown RBP22.89■■□□□ 1.25
HOXC6-204ENST00000509328 TBC1D22BQ9NU19 505 aa22.89■■□□□ 1.25
HOXC6-204ENST00000509328 K7ELQ4 463 aaPredicted RBP22.88■■□□□ 1.25
HOXC6-204ENST00000509328 TDP2O95551 362 aa22.88■■□□□ 1.25
HOXC6-204ENST00000509328 LGALS2P05162 132 aa22.88■■□□□ 1.25
HOXC6-204ENST00000509328 GCFC2P16383 781 aaKnown RBP22.88■■□□□ 1.25
HOXC6-204ENST00000509328 NFRKBQ6P4R8 1299 aa22.88■■□□□ 1.25
HOXC6-204ENST00000509328 FAM126BQ8IXS8 530 aa22.88■■□□□ 1.25
HOXC6-204ENST00000509328 C16orf70Q9BSU1 422 aa22.88■■□□□ 1.25
HOXC6-204ENST00000509328 FOXP1Q9H334 677 aaPredicted RBP22.88■■□□□ 1.25
HOXC6-204ENST00000509328 TELO2Q9Y4R8 837 aa22.88■■□□□ 1.25
HOXC6-204ENST00000509328 WDR81Q562E7 1941 aa22.88■■□□□ 1.25
HOXC6-204ENST00000509328 KAT6AQ92794 2004 aa22.87■■□□□ 1.25
HOXC6-204ENST00000509328 GSTTP1A0A1W2PQM5 241 aa22.87■■□□□ 1.25
HOXC6-204ENST00000509328 FAM205CA6NFA0 338 aa22.87■■□□□ 1.25
HOXC6-204ENST00000509328 H0YGN5 161 aa22.87■■□□□ 1.25
HOXC6-204ENST00000509328 HAS3O00219 553 aa22.87■■□□□ 1.25
HOXC6-204ENST00000509328 TLR3O15455 904 aaKnown RBP22.87■■□□□ 1.25
HOXC6-204ENST00000509328 DHX15O43143 795 aaKnown RBP22.87■■□□□ 1.25
HOXC6-204ENST00000509328 CLTBP09497 229 aa22.87■■□□□ 1.25
HOXC6-204ENST00000509328 TCF7P36402 384 aaPredicted RBP22.87■■□□□ 1.25
HOXC6-204ENST00000509328 PSEN2P49810 448 aa22.87■■□□□ 1.25
HOXC6-204ENST00000509328 PTPN11Q06124 597 aaPredicted RBP22.87■■□□□ 1.25
HOXC6-204ENST00000509328 MFSD10Q14728 455 aa22.87■■□□□ 1.25
HOXC6-204ENST00000509328 PPP4R3AQ6IN85 833 aa22.87■■□□□ 1.25
HOXC6-204ENST00000509328 DDX25Q9UHL0 483 aaKnown RBP22.87■■□□□ 1.25
HOXC6-204ENST00000509328 MSH4O15457 936 aa22.86■■□□□ 1.25
HOXC6-204ENST00000509328 CHMP4BP1P59074 171 aa22.86■■□□□ 1.25
HOXC6-204ENST00000509328 FAAP100Q0VG06 881 aa22.86■■□□□ 1.25
HOXC6-204ENST00000509328 KIAA0753Q2KHM9 967 aa22.86■■□□□ 1.25
HOXC6-204ENST00000509328 UTP14CQ5TAP6 766 aaKnown RBP22.86■■□□□ 1.25
HOXC6-204ENST00000509328 UIMC1Q96RL1 719 aa22.86■■□□□ 1.25
HOXC6-204ENST00000509328 PDLIM7Q9NR12 457 aa22.86■■□□□ 1.25
HOXC6-204ENST00000509328 PRKAG2Q9UGJ0 569 aa22.86■■□□□ 1.25
HOXC6-204ENST00000509328 ZMYND8Q9ULU4 1186 aaPredicted RBP22.86■■□□□ 1.25
HOXC6-204ENST00000509328 MYH9P35579 1960 aaKnown RBP22.86■■□□□ 1.25
HOXC6-204ENST00000509328 LTBP2Q14767 1821 aa22.85■■□□□ 1.25
HOXC6-204ENST00000509328 H3BRB1 525 aa22.85■■□□□ 1.25
HOXC6-204ENST00000509328 DDX39AO00148 427 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms