RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 UBE3CQ15386 1083 aa8.91□□□□□ -0.98
CCSER1-208ENST00000509109 SHROOM1Q2M3G4 852 aaPredicted RBP8.91□□□□□ -0.98
CCSER1-208ENST00000509109 LRRFIP1Q32MZ4 808 aaKnown RBP8.91□□□□□ -0.98
CCSER1-208ENST00000509109 LBX2Q6XYB7 198 aa8.91□□□□□ -0.98
CCSER1-208ENST00000509109 NECAB2Q7Z6G3 386 aa8.91□□□□□ -0.98
CCSER1-208ENST00000509109 PLEKHH3Q7Z736 793 aa8.91□□□□□ -0.98
CCSER1-208ENST00000509109 ATCAYQ86WG3 371 aa8.91□□□□□ -0.98
CCSER1-208ENST00000509109 LCORLQ8N3X6 602 aa8.91□□□□□ -0.98
CCSER1-208ENST00000509109 SDR42E1Q8WUS8 393 aa8.91□□□□□ -0.98
CCSER1-208ENST00000509109 LPAR1Q92633 364 aa8.91□□□□□ -0.98
CCSER1-208ENST00000509109 BOLA2Q9H3K6 86 aa8.91□□□□□ -0.98
CCSER1-208ENST00000509109 DCP1AQ9NPI6 582 aaPredicted RBP8.91□□□□□ -0.98
CCSER1-208ENST00000509109 FRMPD3Q5JV73 1810 aa8.91□□□□□ -0.98
CCSER1-208ENST00000509109 SELPP16109 830 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 CYP2B6P20813 491 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 SEPT2Q15019 361 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 WDR78Q5VTH9 848 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 GPR142Q7Z601 462 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 TRIB2Q92519 343 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 CCDC17Q96LX7 622 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 NACC1Q96RE7 527 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 TANGO6Q9C0B7 1094 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 RPAP3Q9H6T3 665 aaPredicted RBP8.9□□□□□ -0.98
CCSER1-208ENST00000509109 ARMT1Q9H993 441 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 TXNRD2Q9NNW7 524 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 ECHDC1Q9NTX5 307 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 FAM13BQ9NYF5 915 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 RBPJLQ9UBG7 517 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 ARPP21Q9UBL0 812 aaPredicted RBP8.9□□□□□ -0.98
CCSER1-208ENST00000509109 GJD2Q9UKL4 321 aa8.9□□□□□ -0.98
CCSER1-208ENST00000509109 LAMA2P24043 3122 aaKnown RBP8.9□□□□□ -0.98
CCSER1-208ENST00000509109 PARP14Q460N5 1801 aa8.89□□□□□ -0.99
CCSER1-208ENST00000509109 ZFYP08048 801 aaPredicted RBP8.89□□□□□ -0.99
CCSER1-208ENST00000509109 ICA1Q05084 483 aa8.89□□□□□ -0.99
CCSER1-208ENST00000509109 MAP3K21Q5TCX8 1036 aa8.89□□□□□ -0.99
CCSER1-208ENST00000509109 CATSPERGQ6ZRH7 1159 aa8.89□□□□□ -0.99
CCSER1-208ENST00000509109 WFDC8Q8IUA0 241 aa8.89□□□□□ -0.99
CCSER1-208ENST00000509109 FMR1NBQ8N0W7 255 aaPredicted RBP8.89□□□□□ -0.99
CCSER1-208ENST00000509109 MB21D1Q8N884 522 aa8.89□□□□□ -0.99
CCSER1-208ENST00000509109 ACER1Q8TDN7 264 aa8.89□□□□□ -0.99
CCSER1-208ENST00000509109 PLD4Q96BZ4 506 aa8.89□□□□□ -0.99
CCSER1-208ENST00000509109 PORCNQ9H237 461 aa8.89□□□□□ -0.99
CCSER1-208ENST00000509109 HOXC10Q9NYD6 342 aa8.89□□□□□ -0.99
CCSER1-208ENST00000509109 ALPK3Q96L96 1907 aa8.88□□□□□ -0.99
CCSER1-208ENST00000509109 A0A1W2PPC1 479 aa8.88□□□□□ -0.99
CCSER1-208ENST00000509109 SLC15A5A6NIM6 579 aa8.88□□□□□ -0.99
CCSER1-208ENST00000509109 WDR46O15213 610 aaKnown RBP8.88□□□□□ -0.99
CCSER1-208ENST00000509109 MSCO60682 206 aa8.88□□□□□ -0.99
CCSER1-208ENST00000509109 GHRHP01286 108 aa8.88□□□□□ -0.99
CCSER1-208ENST00000509109 COG2Q14746 738 aa8.88□□□□□ -0.99
CCSER1-208ENST00000509109 MFSD14CQ5VZR4 134 aa8.88□□□□□ -0.99
CCSER1-208ENST00000509109 GDF6Q6KF10 455 aaPredicted RBP8.88□□□□□ -0.99
CCSER1-208ENST00000509109 EDC3Q96F86 508 aaKnown RBP8.88□□□□□ -0.99
CCSER1-208ENST00000509109 PAWRQ96IZ0 340 aaKnown RBP8.88□□□□□ -0.99
CCSER1-208ENST00000509109 ZNF287Q9HBT7 754 aa8.88□□□□□ -0.99
CCSER1-208ENST00000509109 SLC5A4Q9NY91 659 aa8.88□□□□□ -0.99
CCSER1-208ENST00000509109 SLC4A4Q9Y6R1 1079 aa8.88□□□□□ -0.99
CCSER1-208ENST00000509109 RLFQ13129 1914 aa8.88□□□□□ -0.99
CCSER1-208ENST00000509109 C9orf172C9J069 976 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 ERC2O15083 957 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 STRNO43815 780 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 FLOT1O75955 427 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 HOXC6P09630 235 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 CYP2D6P10635 497 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 GNAT2P19087 354 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 GUCY1A2P33402 732 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 FXR1P51114 621 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCSER1-208ENST00000509109 GRB14Q14449 540 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 C20orf194Q5TEA3 1177 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 C12orf60Q5U649 245 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 GIMAP6Q6P9H5 292 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 C16orf86Q6ZW13 317 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 KBTBD3Q8NAB2 608 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 SLC44A5Q8NCS7 719 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 SHCBP1Q8NEM2 672 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 USP6NLQ92738 828 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 SEMA6BQ9H3T3 888 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 MROH8Q9H579 483 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 C11orf49Q9H6J7 331 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 DCTPP1Q9H773 170 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 VCPKMTQ9H867 229 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 KANSL2Q9H9L4 492 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 TPSG1Q9NRR2 321 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 OGDHLQ9ULD0 1010 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 TMX2Q9Y320 296 aa8.87□□□□□ -0.99
CCSER1-208ENST00000509109 GREB1LQ9C091 1923 aaPredicted RBP8.87□□□□□ -0.99
CCSER1-208ENST00000509109 ROBO3Q96MS0 1386 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 TTC41PQ6P2S7 1318 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 MYH4Q9Y623 1939 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 A0A1W2PRG0 241 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 PRKAB2O43741 272 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 CNMDO75829 334 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 AKR1B1P15121 316 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 COPB2P35606 906 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 SOX18P35713 384 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 CDK8P49336 464 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 ATP2B2Q01814 1243 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 CACNB2Q08289 660 aaPredicted RBP8.86□□□□□ -0.99
CCSER1-208ENST00000509109 MTMR3Q13615 1198 aa8.86□□□□□ -0.99
CCSER1-208ENST00000509109 DPP9Q86TI2 863 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms