RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 SENP7Q9BQF6 1050 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 USP26Q9BXU7 913 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 TELO2Q9Y4R8 837 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 KIF28PB7ZC32 967 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 RBAK-RBAKDNI3L0D1 243 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 LGALS2P05162 132 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 HOXC8P31273 242 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 MBTPS1Q14703 1052 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 TSGA10IPQ3SY00 556 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 RNF20Q5VTR2 975 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 CNKSR3Q6P9H4 555 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 TMTC3Q6ZXV5 915 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 SERINC5Q86VE9 423 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 RASEFQ8IZ41 740 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 NEK1Q96PY6 1258 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 GPR20Q99678 358 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 RNPEPQ9H4A4 650 aa14.39□□□□□ -0.11
PDPN-208ENST00000509009 ABHD14A-ACY1A0A1B0GW23 586 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 C17orf102A2RUQ5 167 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 RFXAPO00287 272 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 NOP56O00567 594 aaKnown RBP14.38□□□□□ -0.11
PDPN-208ENST00000509009 ATP9AO75110 1047 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 ARHGEF15O94989 841 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 SMIM10L2AP0DMW4 78 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 SMIM10L2BP0DMW5 78 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 KCNJ6P48051 423 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 WDR5P61964 334 aaKnown RBP14.38□□□□□ -0.11
PDPN-208ENST00000509009 TAP1Q03518 808 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 SYNE3Q6ZMZ3 975 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 DHX32Q7L7V1 743 aaKnown RBP14.38□□□□□ -0.11
PDPN-208ENST00000509009 NLRX1Q86UT6 975 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 ATP6V0A1Q93050 837 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 CERS4Q9HA82 394 aa14.38□□□□□ -0.11
PDPN-208ENST00000509009 RSPH10B2B2RC85 870 aa14.37□□□□□ -0.11
PDPN-208ENST00000509009 TREHO43280 583 aa14.37□□□□□ -0.11
PDPN-208ENST00000509009 RSPH10BP0C881 870 aa14.37□□□□□ -0.11
PDPN-208ENST00000509009 POU3F3P20264 500 aaPredicted RBP14.37□□□□□ -0.11
PDPN-208ENST00000509009 THPOP40225 353 aa14.37□□□□□ -0.11
PDPN-208ENST00000509009 IKBKEQ14164 716 aa14.37□□□□□ -0.11
PDPN-208ENST00000509009 UBE2SQ16763 222 aa14.37□□□□□ -0.11
PDPN-208ENST00000509009 ADCK5Q3MIX3 580 aa14.37□□□□□ -0.11
PDPN-208ENST00000509009 UTP14CQ5TAP6 766 aaKnown RBP14.37□□□□□ -0.11
PDPN-208ENST00000509009 TMCO2Q7Z6W1 182 aaPredicted RBP14.37□□□□□ -0.11
PDPN-208ENST00000509009 TCEANC2Q96MN5 208 aa14.37□□□□□ -0.11
PDPN-208ENST00000509009 SETD4Q9NVD3 440 aa14.37□□□□□ -0.11
PDPN-208ENST00000509009 BRPF3Q9ULD4 1205 aa14.37□□□□□ -0.11
PDPN-208ENST00000509009 UBIAD1Q9Y5Z9 338 aa14.37□□□□□ -0.11
PDPN-208ENST00000509009 EPOPA6NHQ4 379 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 TLL1O43897 1013 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 LGR5O75473 907 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 ITGB5P18084 799 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 DEFB103AP81534 67 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 FUT2Q10981 343 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 TJAP1Q5JTD0 557 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 APOA5Q6Q788 366 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 MICU3Q86XE3 530 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 GIMAP8Q8ND71 665 aaPredicted RBP14.36□□□□□ -0.11
PDPN-208ENST00000509009 SYMPKQ92797 1274 aaKnown RBP14.36□□□□□ -0.11
PDPN-208ENST00000509009 GPRASP2Q96D09 838 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 PCDHA6Q9UN73 950 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 PCDHA8Q9Y5H6 950 aa14.36□□□□□ -0.11
PDPN-208ENST00000509009 V9GY48 417 aaPredicted RBP14.36□□□□□ -0.11
PDPN-208ENST00000509009 GBF1Q92538 1859 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 MAFGO15525 162 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 EFCAB14O75071 495 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 CDC45O75419 566 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 GNAT1P11488 350 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 KCNA2P16389 499 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 ADAM17P78536 824 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 SP4Q02446 784 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 HEATR3Q7Z4Q2 680 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 TRIM50Q86XT4 487 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 DBF4BQ8NFT6 615 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 ATXN2LQ8WWM7 1075 aaKnown RBP14.35□□□□□ -0.11
PDPN-208ENST00000509009 ARNTL2Q8WYA1 636 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 CDHR1Q96JP9 859 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 RAD9AQ99638 391 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 ZBED2Q9BTP6 218 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 OSBPL7Q9BZF2 842 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 JADE2Q9NQC1 790 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 FAM217BQ9NTX9 383 aaPredicted RBP14.35□□□□□ -0.11
PDPN-208ENST00000509009 MTCH2Q9Y6C9 303 aa14.35□□□□□ -0.11
PDPN-208ENST00000509009 SPTBN5Q9NRC6 3674 aaKnown RBP14.35□□□□□ -0.11
PDPN-208ENST00000509009 PRRC2BQ5JSZ5 2229 aaKnown RBP14.34□□□□□ -0.11
PDPN-208ENST00000509009 GSTTP1A0A1W2PQM5 241 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 LCHNA4D1U4 455 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 SPDYE3A6NKU9 549 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 ZBTB43O43298 467 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 GJB5O95377 273 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 KRT32Q14532 448 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 PLEKHG4Q58EX7 1191 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 WWC2Q6AWC2 1192 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 TYW1BQ6NUM6 668 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.34□□□□□ -0.11
PDPN-208ENST00000509009 SPRED2Q7Z698 418 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 SEPT1Q8WYJ6 367 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 KCNB2Q92953 911 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 RBM28Q9NW13 759 aaKnown RBP14.34□□□□□ -0.11
PDPN-208ENST00000509009 NCOR1O75376 2440 aa14.34□□□□□ -0.11
PDPN-208ENST00000509009 EMSYQ7Z589 1322 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms