RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 KIAA0100Q14667 2235 aaKnown RBP11.59□□□□□ -0.55
HTT-204ENST00000508321 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.59□□□□□ -0.55
HTT-204ENST00000508321 NOP56O00567 594 aaKnown RBP11.59□□□□□ -0.55
HTT-204ENST00000508321 MSH4O15457 936 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 EDIL3O43854 480 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 GAS7O60861 476 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 FARP2O94887 1054 aaPredicted RBP11.59□□□□□ -0.55
HTT-204ENST00000508321 GGPS1O95749 300 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 OR52Z1P0C646 297 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 HOXD8P13378 290 aaPredicted RBP11.59□□□□□ -0.55
HTT-204ENST00000508321 SFNP31947 248 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 GJA8P48165 433 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 ARHGAP1Q07960 439 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 LRCH2Q5VUJ6 765 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 ARL6IP4Q66PJ3 421 aaKnown RBP11.59□□□□□ -0.55
HTT-204ENST00000508321 ZNF746Q6NUN9 644 aaPredicted RBP11.59□□□□□ -0.55
HTT-204ENST00000508321 RNF180Q86T96 592 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 POTEDQ86YR6 584 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 DHX37Q8IY37 1157 aaKnown RBP11.59□□□□□ -0.55
HTT-204ENST00000508321 PCSK9Q8NBP7 692 aaKnown RBP11.59□□□□□ -0.55
HTT-204ENST00000508321 ARRDC4Q8NCT1 418 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 OR6J1Q8NGC5 347 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 CYP2W1Q8TAV3 490 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 TEKT3Q9BXF9 490 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 CRISPLD2Q9H0B8 497 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 MLXIPQ9HAP2 919 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.59□□□□□ -0.55
HTT-204ENST00000508321 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 SLC9A2Q9UBY0 812 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 OGDHLQ9ULD0 1010 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 MYH9P35579 1960 aaKnown RBP11.59□□□□□ -0.55
HTT-204ENST00000508321 ELP1O95163 1332 aa11.59□□□□□ -0.55
HTT-204ENST00000508321 SCN10AQ9Y5Y9 1956 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 MOXD2PA6NHM9 499 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 A6NJR5 290 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 ADCY6O43306 1168 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 MARCH6O60337 910 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 KPNA6O60684 536 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 ADAMTS4O75173 837 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 ARP10275 920 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 MCM7P33993 719 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 TOB1P50616 345 aaPredicted RBP11.58□□□□□ -0.56
HTT-204ENST00000508321 JAK3P52333 1124 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 ATP2C1P98194 919 aaPredicted RBP11.58□□□□□ -0.56
HTT-204ENST00000508321 ITGB3BPQ13352 177 aaPredicted RBP11.58□□□□□ -0.56
HTT-204ENST00000508321 PPP2R5CQ13362 524 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 PKP1Q13835 747 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 MTFR1Q15390 333 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 FSCN1Q16658 493 aaKnown RBP11.58□□□□□ -0.56
HTT-204ENST00000508321 LY6KQ17RY6 165 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 TMEM266Q2M3C6 531 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 LHX8Q68G74 356 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 U2AF1L4Q8WU68 220 aaKnown RBP11.58□□□□□ -0.56
HTT-204ENST00000508321 SPATA33Q96N06 139 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 DEFB118Q96PH6 123 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 TSEN34Q9BSV6 310 aaKnown RBP11.58□□□□□ -0.56
HTT-204ENST00000508321 RAB34Q9BZG1 259 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 CFAP45Q9UL16 551 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 STK24Q9Y6E0 443 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 EMSYQ7Z589 1322 aa11.58□□□□□ -0.56
HTT-204ENST00000508321 WDR64B1ANS9 1081 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 KBTBD13C9JR72 458 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 DNM1LO00429 736 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 PSMD10O75832 226 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 CABYRO75952 493 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 SGPL1O95470 568 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 YEATS4O95619 227 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 MMP3P08254 477 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 C6orf222P0C671 652 aaPredicted RBP11.57□□□□□ -0.56
HTT-204ENST00000508321 ATP2B1P20020 1258 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 DGKDQ16760 1214 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 ANO1Q5XXA6 986 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 NEK9Q8TD19 979 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 MTMR9Q96QG7 549 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 KATNAL1Q9BW62 490 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 SEZ6LQ9BYH1 1024 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 CHMP5Q9NZZ3 219 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 PCDHB6Q9Y5E3 794 aa11.57□□□□□ -0.56
HTT-204ENST00000508321 TNRC18O15417 2968 aaPredicted RBP11.57□□□□□ -0.56
HTT-204ENST00000508321 WNT7AO00755 349 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 DHX15O43143 795 aaKnown RBP11.56□□□□□ -0.56
HTT-204ENST00000508321 ATP9AO75110 1047 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 PPFIA4O75335 1185 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 NASPP49321 788 aaPredicted RBP11.56□□□□□ -0.56
HTT-204ENST00000508321 SLC26A2P50443 739 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 FXR2P51116 673 aaKnown RBP eCLIP11.56□□□□□ -0.562e-6■□□□□ 8.4
HTT-204ENST00000508321 KRT85P78386 507 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 SP2Q02086 613 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 PTGDRQ13258 359 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 ZNF174Q15697 407 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 MIS18BP1Q6P0N0 1132 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 CYFIP1Q7L576 1253 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 KLHDC9Q8NEP7 349 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 HAS1Q92839 578 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 FERMT2Q96AC1 680 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 LENG1Q96BZ8 264 aaPredicted RBP11.56□□□□□ -0.56
HTT-204ENST00000508321 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
HTT-204ENST00000508321 GPR20Q99678 358 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 PKD2L1Q9P0L9 805 aa11.56□□□□□ -0.56
HTT-204ENST00000508321 VAV3Q9UKW4 847 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms