RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 PIK3AP1Q6ZUJ8 805 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 NEK8Q86SG6 692 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 DIS3L2Q8IYB7 885 aaKnown RBP17.04■□□□□ 0.32
RNF4-210ENST00000508235 FBXO18Q8NFZ0 1043 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 CYP2W1Q8TAV3 490 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 SNX21Q969T3 373 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 AGO4Q9HCK5 861 aaKnown RBP17.04■□□□□ 0.32
RNF4-210ENST00000508235 TCEAL9Q9UHQ7 104 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 BRCA2P51587 3418 aa17.03■□□□□ 0.32
RNF4-210ENST00000508235 IGLV3-22A0A075B6J6 115 aa17.03■□□□□ 0.32
RNF4-210ENST00000508235 K7ELQ4 463 aaPredicted RBP17.03■□□□□ 0.32
RNF4-210ENST00000508235 ARVCFO00192 962 aa17.03■□□□□ 0.32
RNF4-210ENST00000508235 ATP9AO75110 1047 aa17.03■□□□□ 0.32
RNF4-210ENST00000508235 ARP10275 920 aa17.03■□□□□ 0.32
RNF4-210ENST00000508235 HOXD8P13378 290 aaPredicted RBP17.03■□□□□ 0.32
RNF4-210ENST00000508235 GCFC2P16383 781 aaKnown RBP17.03■□□□□ 0.32
RNF4-210ENST00000508235 RTP1P59025 263 aa17.03■□□□□ 0.32
RNF4-210ENST00000508235 CUL4AQ13619 759 aa17.03■□□□□ 0.32
RNF4-210ENST00000508235 INF2Q27J81 1249 aa17.03■□□□□ 0.32
RNF4-210ENST00000508235 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
RNF4-210ENST00000508235 ZNF577Q9BSK1 485 aa17.03■□□□□ 0.32
RNF4-210ENST00000508235 JPH1Q9HDC5 661 aaPredicted RBP17.03■□□□□ 0.32
RNF4-210ENST00000508235 SCN10AQ9Y5Y9 1956 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 CYP3A7-CYP3A51PA0A087WV96 503 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 DCDC2CA8MYV0 355 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 BTBD18B2RXH4 712 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 IPO5O00410 1097 aaKnown RBP17.02■□□□□ 0.32
RNF4-210ENST00000508235 TLR3O15455 904 aaKnown RBP17.02■□□□□ 0.32
RNF4-210ENST00000508235 SORBS3O60504 671 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 CYP3A7P24462 503 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 GJB2P29033 226 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 NR5A1Q13285 461 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 GNL2Q13823 731 aaKnown RBP17.02■□□□□ 0.32
RNF4-210ENST00000508235 TRIM60Q495X7 471 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 Q4G0T1 1027 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 ANKRD33Q7Z3H0 272 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 HSCBQ8IWL3 235 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 C7orf61Q8IZ16 206 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 SEPT1Q8WYJ6 367 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 TNFRSF25Q93038 417 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 TOX2Q96NM4 488 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 GPR20Q99678 358 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 FOXP1Q9H334 677 aaPredicted RBP17.02■□□□□ 0.32
RNF4-210ENST00000508235 TBC1D22BQ9NU19 505 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 PKD2L1Q9P0L9 805 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 SLC9A2Q9UBY0 812 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 ATP11BQ9Y2G3 1177 aa17.02■□□□□ 0.32
RNF4-210ENST00000508235 F2P00734 622 aa17.01■□□□□ 0.31
RNF4-210ENST00000508235 GUCY1B3Q02153 619 aa17.01■□□□□ 0.31
RNF4-210ENST00000508235 LETM2Q2VYF4 491 aa17.01■□□□□ 0.31
RNF4-210ENST00000508235 PPP4R3AQ6IN85 833 aa17.01■□□□□ 0.31
RNF4-210ENST00000508235 NFRKBQ6P4R8 1299 aa17.01■□□□□ 0.31
RNF4-210ENST00000508235 SLC43A3Q8NBI5 491 aa17.01■□□□□ 0.31
RNF4-210ENST00000508235 INTS4Q96HW7 963 aaKnown RBP17.01■□□□□ 0.31
RNF4-210ENST00000508235 PRKAG2Q9UGJ0 569 aa17.01■□□□□ 0.31
RNF4-210ENST00000508235 ZNF215Q9UL58 517 aaPredicted RBP17.01■□□□□ 0.31
RNF4-210ENST00000508235 PQBP1O60828 265 aaKnown RBP17■□□□□ 0.31
RNF4-210ENST00000508235 CDK7P50613 346 aa17■□□□□ 0.31
RNF4-210ENST00000508235 PSMC6P62333 389 aa17■□□□□ 0.31
RNF4-210ENST00000508235 SP4Q02446 784 aa17■□□□□ 0.31
RNF4-210ENST00000508235 PTPN11Q06124 597 aaPredicted RBP17■□□□□ 0.31
RNF4-210ENST00000508235 LENG9Q96B70 501 aa17■□□□□ 0.31
RNF4-210ENST00000508235 RIT2Q99578 217 aa17■□□□□ 0.31
RNF4-210ENST00000508235 DDX25Q9UHL0 483 aaKnown RBP17■□□□□ 0.31
RNF4-210ENST00000508235 H3BQV1 296 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 H3BRB1 525 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 CCNT1O60563 726 aaKnown RBP16.99■□□□□ 0.31
RNF4-210ENST00000508235 TDP2O95551 362 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 LGALS2P05162 132 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 ZNF286BP0CG31 522 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 PDCP20941 246 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 TCF7P36402 384 aaPredicted RBP16.99■□□□□ 0.31
RNF4-210ENST00000508235 KRT76Q01546 638 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 TLE2Q04725 743 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 ITGB3BPQ13352 177 aaPredicted RBP16.99■□□□□ 0.31
RNF4-210ENST00000508235 NBPF20Q3BBV1 942 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 MBOAT7Q96N66 472 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 C16orf70Q9BSU1 422 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 TUT1Q9H6E5 874 aaKnown RBP16.99■□□□□ 0.31
RNF4-210ENST00000508235 BCAS3Q9H6U6 928 aa16.99■□□□□ 0.31
RNF4-210ENST00000508235 GRIN2DO15399 1336 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 MSH4O15457 936 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 EDIL3O43854 480 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 CLTBP09497 229 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 SUPT20HL2P0C7V6 817 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 PSEN2P49810 448 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 ACTR2P61160 394 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 MFSD10Q14728 455 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 LARP1BQ659C4 914 aaKnown RBP16.98■□□□□ 0.31
RNF4-210ENST00000508235 ZNF746Q6NUN9 644 aaPredicted RBP16.98■□□□□ 0.31
RNF4-210ENST00000508235 SESTD1Q86VW0 696 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 FAM126BQ8IXS8 530 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 C7orf31Q8N865 590 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 KAT2BQ92831 832 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 FAM20AQ96MK3 541 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 TEKT3Q9BXF9 490 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 AZI2Q9H6S1 392 aa16.98■□□□□ 0.31
RNF4-210ENST00000508235 GSTTP1A0A1W2PQM5 241 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 DDX39AO00148 427 aaKnown RBP16.97■□□□□ 0.31
RNF4-210ENST00000508235 HAS3O00219 553 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms