RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 PTRH1Q86Y79 214 aaKnown RBP9.08□□□□□ -0.96
COL6A4P1-204ENST00000508169 UHMK1Q8TAS1 419 aaKnown RBP9.08□□□□□ -0.96
COL6A4P1-204ENST00000508169 DSEQ9UL01 958 aa9.08□□□□□ -0.96
COL6A4P1-204ENST00000508169 H7C1D1 291 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 MAN2B1O00754 1011 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 KCNK3O14649 394 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 MAFKO60675 156 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 KATNA1O75449 491 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 PNLIPP16233 465 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 YBX3P16989 372 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 ARL4AP40617 200 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 SLC6A11P48066 632 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 ZNF792Q3KQV3 632 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 ATP13A4Q4VNC1 1196 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 FIGNQ5HY92 759 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 EMC4Q5J8M3 183 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 ODR4Q5SWX8 454 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 STEAP3Q658P3 488 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 CREB3L3Q68CJ9 461 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 DCP2Q8IU60 420 aaKnown RBP9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 MYLIPQ8WY64 445 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 EMC7Q9NPA0 242 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 SPTLC3Q9NUV7 552 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 OXSMQ9NWU1 459 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 SRPK3Q9UPE1 567 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 CTNND2Q9UQB3 1225 aa9.07□□□□□ -0.96
COL6A4P1-204ENST00000508169 IRF9Q00978 393 aa9.06□□□□□ -0.96
COL6A4P1-204ENST00000508169 CYP4F22Q6NT55 531 aa9.06□□□□□ -0.96
COL6A4P1-204ENST00000508169 NETO2Q8NC67 525 aa9.06□□□□□ -0.96
COL6A4P1-204ENST00000508169 SH3RF2Q8TEC5 729 aa9.06□□□□□ -0.96
COL6A4P1-204ENST00000508169 PUS7LQ9H0K6 701 aaKnown RBP9.06□□□□□ -0.96
COL6A4P1-204ENST00000508169 RC3H2Q9HBD1 1191 aaKnown RBP9.06□□□□□ -0.96
COL6A4P1-204ENST00000508169 H2AFY2Q9P0M6 372 aaPredicted RBP9.06□□□□□ -0.96
COL6A4P1-204ENST00000508169 NUB1Q9Y5A7 615 aa9.06□□□□□ -0.96
COL6A4P1-204ENST00000508169 ADAM23O75077 832 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 HIP1RO75146 1068 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 ZBTB48P10074 688 aaPredicted RBP9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 MTMR1Q13613 665 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 NOSTRINQ8IVI9 506 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 SIRT2Q8IXJ6 389 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 NLGN4XQ8N0W4 816 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 EFHBQ8N7U6 833 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 COG1Q8WTW3 980 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 SEC14L1Q92503 715 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 SHISA4Q96DD7 197 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 MTMR8Q96EF0 704 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 CD244Q9BZW8 370 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 AP5M1Q9H0R1 490 aa9.05□□□□□ -0.96
COL6A4P1-204ENST00000508169 HGSO14964 777 aaPredicted RBP9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 SRGAP3O43295 1099 aa9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 ULK1O75385 1050 aa9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 GALK1P51570 392 aa9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 ITKQ08881 620 aa9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 ZNF174Q15697 407 aa9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 IQSEC1Q6DN90 963 aa9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 FSTL4Q6MZW2 842 aa9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 SCYL1Q96KG9 808 aa9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 SMOC1Q9H4F8 434 aa9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 TNFRSF12AQ9NP84 129 aa9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 G3BP2Q9UN86 482 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-204ENST00000508169 SCDO00767 359 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 SLC27A2O14975 620 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 CLASP2O75122 1294 aaKnown RBP9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 TADA3O75528 432 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 DBHP09172 617 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 LRP8Q14114 963 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 KCTD1Q719H9 257 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 PASD1Q8IV76 773 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 CNTD1Q8N815 330 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 KIAA1958Q8N8K9 716 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 ABHD4Q8TB40 342 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 PHOSPHO1Q8TCT1 267 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 JDP2Q8WYK2 163 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 ASPSCR1Q9BZE9 553 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 PCIF1Q9H4Z3 704 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 MYOTQ9UBF9 498 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 NUDT5Q9UKK9 219 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 ZNF652Q9Y2D9 606 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 SIT1Q9Y3P8 196 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 ATP23Q9Y6H3 246 aa9.03□□□□□ -0.96
COL6A4P1-204ENST00000508169 MARCH6O60337 910 aa9.02□□□□□ -0.97
COL6A4P1-204ENST00000508169 CYBBP04839 570 aa9.02□□□□□ -0.97
COL6A4P1-204ENST00000508169 ZMYM1Q5SVZ6 1142 aa9.02□□□□□ -0.97
COL6A4P1-204ENST00000508169 CPZQ66K79 652 aa9.02□□□□□ -0.97
COL6A4P1-204ENST00000508169 HDGFL2Q7Z4V5 671 aaPredicted RBP9.02□□□□□ -0.97
COL6A4P1-204ENST00000508169 TRIM8Q9BZR9 551 aa9.02□□□□□ -0.97
COL6A4P1-204ENST00000508169 RNF32Q9H0A6 362 aa9.02□□□□□ -0.97
COL6A4P1-204ENST00000508169 PCDHB4Q9Y5E5 795 aa9.02□□□□□ -0.97
COL6A4P1-204ENST00000508169 SPO11Q9Y5K1 396 aa9.02□□□□□ -0.97
COL6A4P1-204ENST00000508169 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.01□□□□□ -0.97
COL6A4P1-204ENST00000508169 SGSM2O43147 1006 aa9.01□□□□□ -0.97
COL6A4P1-204ENST00000508169 ALDH1L1O75891 902 aa9.01□□□□□ -0.97
COL6A4P1-204ENST00000508169 PRKD3O94806 890 aa9.01□□□□□ -0.97
COL6A4P1-204ENST00000508169 SLC9A1P19634 815 aa9.01□□□□□ -0.97
COL6A4P1-204ENST00000508169 AFMP43652 599 aa9.01□□□□□ -0.97
COL6A4P1-204ENST00000508169 KIF11P52732 1056 aa9.01□□□□□ -0.97
COL6A4P1-204ENST00000508169 EPHA5P54756 1037 aa9.01□□□□□ -0.97
COL6A4P1-204ENST00000508169 DDB1Q16531 1140 aa9.01□□□□□ -0.97
COL6A4P1-204ENST00000508169 PAQR3Q6TCH7 311 aa9.01□□□□□ -0.97
COL6A4P1-204ENST00000508169 FLAD1Q8NFF5 587 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms