RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 MTRQ99707 1265 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 NOP56O00567 594 aaKnown RBP12.35□□□□□ -0.43
PROM1-207ENST00000508167 UBA7P41226 1012 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 NLRP12P59046 1061 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 LRMPQ12912 555 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 PNOCQ13519 176 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 E2F4Q16254 413 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 SPECC1Q5M775 1068 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 LRCH2Q5VUJ6 765 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 PCNX4Q63HM2 1172 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 CCDC73Q6ZRK6 1079 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 TEX2Q8IWB9 1127 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 MXRA8Q9BRK3 442 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 WDR11Q9BZH6 1224 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 MYH7BA7E2Y1 1941 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 CLK2P49760 499 aaKnown RBP12.35□□□□□ -0.43
PROM1-207ENST00000508167 NCAPH2Q6IBW4 605 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 KRBA2Q6ZNG9 492 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 KRI1Q8N9T8 703 aaKnown RBP12.35□□□□□ -0.43
PROM1-207ENST00000508167 GJA10Q969M2 543 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 APBA2Q99767 749 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 TINF2Q9BSI4 451 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 GRB14Q14449 540 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 CACTINQ8WUQ7 758 aaKnown RBP12.35□□□□□ -0.43
PROM1-207ENST00000508167 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.35□□□□□ -0.43
PROM1-207ENST00000508167 FAM13BQ9NYF5 915 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 SMCHD1A6NHR9 2005 aa12.35□□□□□ -0.43
PROM1-207ENST00000508167 BACH1O14867 736 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 SETQ01105 290 aaPredicted RBP12.34□□□□□ -0.43
PROM1-207ENST00000508167 APTXQ7Z2E3 356 aaKnown RBP12.34□□□□□ -0.43
PROM1-207ENST00000508167 VSIG10LQ86VR7 867 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 SLFN12Q8IYM2 578 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 PDILTQ8N807 584 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 SAGE1Q9NXZ1 904 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 GABRQQ9UN88 632 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 PTPRFP10586 1907 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 FAM86B1E9PN63 330 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 IPO5O00410 1097 aaKnown RBP12.34□□□□□ -0.43
PROM1-207ENST00000508167 SLC37A4O43826 429 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 FAM86B2P0C5J1 330 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 TXNP10599 105 aaKnown RBP12.34□□□□□ -0.43
PROM1-207ENST00000508167 ELNP15502 786 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 CCZ1BP86790 482 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 CCZ1P86791 482 aaPredicted RBP12.34□□□□□ -0.43
PROM1-207ENST00000508167 TTLL4Q14679 1199 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 PRAMEF19Q5SWL8 479 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 XRRA1Q6P2D8 792 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 SASS6Q6UVJ0 657 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 MAML3Q96JK9 1138 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 KCNH7Q9NS40 1196 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 ADCY3O60266 1144 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 KINO60870 393 aaKnown RBP12.34□□□□□ -0.43
PROM1-207ENST00000508167 CCL14Q16627 93 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 NPLOC4Q8TAT6 608 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 TEKT3Q9BXF9 490 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 ARP10275 920 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 AOPEPQ8N6M6 819 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 ANP32BQ92688 251 aaKnown RBP12.34□□□□□ -0.43
PROM1-207ENST00000508167 CSRNP2Q9H175 543 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 LRWD1Q9UFC0 647 aa12.34□□□□□ -0.43
PROM1-207ENST00000508167 SSBP05455 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
PROM1-207ENST00000508167 TERF1P54274 439 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 DHX37Q8IY37 1157 aaKnown RBP12.33□□□□□ -0.44
PROM1-207ENST00000508167 ERMNQ8TAM6 284 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 PLIN2Q99541 437 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 TMEM60Q9H2L4 133 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 KCND1Q9NSA2 647 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 SRRDQ9UH36 339 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 HSPA1AP0DMV8 641 aaKnown RBP12.33□□□□□ -0.44
PROM1-207ENST00000508167 HSPA1BP0DMV9 641 aaKnown RBP12.33□□□□□ -0.44
PROM1-207ENST00000508167 ATP2C1P98194 919 aaPredicted RBP12.33□□□□□ -0.44
PROM1-207ENST00000508167 KRT79Q5XKE5 535 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 PPP4R3AQ6IN85 833 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 SCFD2Q8WU76 684 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 LBX1P52954 281 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 DHX8Q14562 1220 aaKnown RBP12.33□□□□□ -0.44
PROM1-207ENST00000508167 ABHD16BQ9H3Z7 469 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 JADE2Q9NQC1 790 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 KCNH3Q9ULD8 1083 aa12.33□□□□□ -0.44
PROM1-207ENST00000508167 ADGRA2Q96PE1 1338 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 ITGB5P18084 799 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 CDC25AP30304 524 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 MRPS9P82933 396 aaKnown RBP12.32□□□□□ -0.44
PROM1-207ENST00000508167 MORC3Q14149 939 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 ZNF792Q3KQV3 632 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 MIER3Q7Z3K6 550 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 GRAMD1CQ8IYS0 662 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 FERMT2Q96AC1 680 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 CCDC34Q96HJ3 373 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 ANO10Q9NW15 660 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 LAD1O00515 517 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 STAM2O75886 525 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 ZNF18P17022 549 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 SYKP43405 635 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 NOLC1Q14978 699 aaKnown RBP eCLIP12.32□□□□□ -0.44
PROM1-207ENST00000508167 BRDTQ58F21 947 aaPredicted RBP12.32□□□□□ -0.44
PROM1-207ENST00000508167 SPC24Q8NBT2 197 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 CALML4Q96GE6 196 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 SPC25Q9HBM1 224 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms