RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 CHD9Q3L8U1 2897 aa23.96■■□□□ 1.43
CLDND1-216ENST00000507944 KIF28PB7ZC32 967 aa23.95■■□□□ 1.42
CLDND1-216ENST00000507944 CA3P07451 260 aa23.95■■□□□ 1.42
CLDND1-216ENST00000507944 KCNJ6P48051 423 aa23.95■■□□□ 1.42
CLDND1-216ENST00000507944 ZNF618Q5T7W0 954 aa23.95■■□□□ 1.42
CLDND1-216ENST00000507944 CNKSR3Q6P9H4 555 aa23.95■■□□□ 1.42
CLDND1-216ENST00000507944 GPR20Q99678 358 aa23.95■■□□□ 1.42
CLDND1-216ENST00000507944 SENP7Q9BQF6 1050 aa23.95■■□□□ 1.42
CLDND1-216ENST00000507944 TTC28Q96AY4 2481 aa23.95■■□□□ 1.42
CLDND1-216ENST00000507944 KAT6AQ92794 2004 aa23.94■■□□□ 1.42
CLDND1-216ENST00000507944 C17orf102A2RUQ5 167 aa23.94■■□□□ 1.42
CLDND1-216ENST00000507944 CDC45O75419 566 aa23.94■■□□□ 1.42
CLDND1-216ENST00000507944 EXOSC10Q01780 885 aaKnown RBP23.94■■□□□ 1.42
CLDND1-216ENST00000507944 TRAF7Q6Q0C0 670 aa23.94■■□□□ 1.42
CLDND1-216ENST00000507944 SERINC5Q86VE9 423 aa23.94■■□□□ 1.42
CLDND1-216ENST00000507944 SMIM10L2AP0DMW4 78 aa23.93■■□□□ 1.42
CLDND1-216ENST00000507944 SMIM10L2BP0DMW5 78 aa23.93■■□□□ 1.42
CLDND1-216ENST00000507944 WDR5P61964 334 aaKnown RBP23.93■■□□□ 1.42
CLDND1-216ENST00000507944 CCDC85BQ15834 202 aaPredicted RBP23.93■■□□□ 1.42
CLDND1-216ENST00000507944 TSGA10IPQ3SY00 556 aa23.93■■□□□ 1.42
CLDND1-216ENST00000507944 APOA5Q6Q788 366 aa23.93■■□□□ 1.42
CLDND1-216ENST00000507944 DHX32Q7L7V1 743 aaKnown RBP23.93■■□□□ 1.42
CLDND1-216ENST00000507944 RASEFQ8IZ41 740 aa23.93■■□□□ 1.42
CLDND1-216ENST00000507944 ATP6V0A1Q93050 837 aa23.93■■□□□ 1.42
CLDND1-216ENST00000507944 TCEANC2Q96MN5 208 aa23.93■■□□□ 1.42
CLDND1-216ENST00000507944 RNPEPQ9H4A4 650 aa23.93■■□□□ 1.42
CLDND1-216ENST00000507944 PRDM6Q9NQX0 595 aa23.93■■□□□ 1.42
CLDND1-216ENST00000507944 PRRC2BQ5JSZ5 2229 aaKnown RBP23.93■■□□□ 1.42
CLDND1-216ENST00000507944 UBE2SQ16763 222 aa23.92■■□□□ 1.42
CLDND1-216ENST00000507944 HEATR3Q7Z4Q2 680 aa23.92■■□□□ 1.42
CLDND1-216ENST00000507944 GIMAP8Q8ND71 665 aaPredicted RBP23.92■■□□□ 1.42
CLDND1-216ENST00000507944 GPRASP2Q96D09 838 aa23.92■■□□□ 1.42
CLDND1-216ENST00000507944 RBM28Q9NW13 759 aaKnown RBP23.92■■□□□ 1.42
CLDND1-216ENST00000507944 TELO2Q9Y4R8 837 aa23.92■■□□□ 1.42
CLDND1-216ENST00000507944 PTPRSQ13332 1948 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 ABHD14A-ACY1A0A1B0GW23 586 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 SPDYE3A6NKU9 549 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 TLL1O43897 1013 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 HOXC8P31273 242 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 THPOP40225 353 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 SP4Q02446 784 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 MBTPS1Q14703 1052 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 TCTN1Q2MV58 587 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 ADCK5Q3MIX3 580 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 UTP14CQ5TAP6 766 aaKnown RBP23.91■■□□□ 1.42
CLDND1-216ENST00000507944 CDHR1Q96JP9 859 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 CERS4Q9HA82 394 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 BRPF3Q9ULD4 1205 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 VCANP13611 3396 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 CHD7Q9P2D1 2997 aa23.91■■□□□ 1.42
CLDND1-216ENST00000507944 RSPH10B2B2RC85 870 aa23.9■■□□□ 1.42
CLDND1-216ENST00000507944 TREHO43280 583 aa23.9■■□□□ 1.42
CLDND1-216ENST00000507944 ZBTB43O43298 467 aa23.9■■□□□ 1.42
CLDND1-216ENST00000507944 RSPH10BP0C881 870 aa23.9■■□□□ 1.42
CLDND1-216ENST00000507944 IKBKEQ14164 716 aa23.9■■□□□ 1.42
CLDND1-216ENST00000507944 KRT32Q14532 448 aa23.9■■□□□ 1.42
CLDND1-216ENST00000507944 TRIM50Q86XT4 487 aa23.9■■□□□ 1.42
CLDND1-216ENST00000507944 SETD4Q9NVD3 440 aa23.9■■□□□ 1.42
CLDND1-216ENST00000507944 ZNF215Q9UL58 517 aaPredicted RBP23.9■■□□□ 1.42
CLDND1-216ENST00000507944 PCDHA6Q9UN73 950 aa23.9■■□□□ 1.42
CLDND1-216ENST00000507944 PCDHA8Q9Y5H6 950 aa23.9■■□□□ 1.42
CLDND1-216ENST00000507944 EMSYQ7Z589 1322 aa23.89■■□□□ 1.42
CLDND1-216ENST00000507944 RFXAPO00287 272 aa23.89■■□□□ 1.41
CLDND1-216ENST00000507944 EFCAB14O75071 495 aa23.89■■□□□ 1.41
CLDND1-216ENST00000507944 ATP9AO75110 1047 aa23.89■■□□□ 1.41
CLDND1-216ENST00000507944 LGR5O75473 907 aa23.89■■□□□ 1.41
CLDND1-216ENST00000507944 GNAT1P11488 350 aa23.89■■□□□ 1.41
CLDND1-216ENST00000507944 ITGB5P18084 799 aa23.89■■□□□ 1.41
CLDND1-216ENST00000507944 DEFB103AP81534 67 aa23.89■■□□□ 1.41
CLDND1-216ENST00000507944 TAP1Q03518 808 aa23.89■■□□□ 1.41
CLDND1-216ENST00000507944 RTN1Q16799 776 aa23.89■■□□□ 1.41
CLDND1-216ENST00000507944 TMCO2Q7Z6W1 182 aaPredicted RBP23.89■■□□□ 1.41
CLDND1-216ENST00000507944 SYMPKQ92797 1274 aaKnown RBP23.89■■□□□ 1.41
CLDND1-216ENST00000507944 ZBED2Q9BTP6 218 aa23.89■■□□□ 1.41
CLDND1-216ENST00000507944 UBIAD1Q9Y5Z9 338 aa23.89■■□□□ 1.41
CLDND1-216ENST00000507944 CNTNAP5Q8WYK1 1306 aa23.88■■□□□ 1.41
CLDND1-216ENST00000507944 ARHGEF15O94989 841 aa23.88■■□□□ 1.41
CLDND1-216ENST00000507944 KCNA2P16389 499 aa23.88■■□□□ 1.41
CLDND1-216ENST00000507944 WWC2Q6AWC2 1192 aa23.88■■□□□ 1.41
CLDND1-216ENST00000507944 V9GY48 417 aaPredicted RBP23.88■■□□□ 1.41
CLDND1-216ENST00000507944 RBAK-RBAKDNI3L0D1 243 aa23.87■■□□□ 1.41
CLDND1-216ENST00000507944 HMGB1P09429 215 aaKnown RBP23.87■■□□□ 1.41
CLDND1-216ENST00000507944 FUT2Q10981 343 aa23.87■■□□□ 1.41
CLDND1-216ENST00000507944 TJAP1Q5JTD0 557 aa23.87■■□□□ 1.41
CLDND1-216ENST00000507944 ARNTL2Q8WYA1 636 aa23.87■■□□□ 1.41
CLDND1-216ENST00000507944 EHMT1Q9H9B1 1298 aa23.87■■□□□ 1.41
CLDND1-216ENST00000507944 JADE2Q9NQC1 790 aa23.87■■□□□ 1.41
CLDND1-216ENST00000507944 NCOR1O75376 2440 aa23.86■■□□□ 1.41
CLDND1-216ENST00000507944 KLF18A0A0U1RQI7 1052 aa23.86■■□□□ 1.41
CLDND1-216ENST00000507944 EPOPA6NHQ4 379 aa23.86■■□□□ 1.41
CLDND1-216ENST00000507944 MAFGO15525 162 aa23.86■■□□□ 1.41
CLDND1-216ENST00000507944 TCF7P36402 384 aaPredicted RBP23.86■■□□□ 1.41
CLDND1-216ENST00000507944 NAPAP54920 295 aa23.86■■□□□ 1.41
CLDND1-216ENST00000507944 MTMR1Q13613 665 aa23.86■■□□□ 1.41
CLDND1-216ENST00000507944 MICALL1Q8N3F8 863 aa23.86■■□□□ 1.41
CLDND1-216ENST00000507944 DBF4BQ8NFT6 615 aa23.86■■□□□ 1.41
CLDND1-216ENST00000507944 ATXN2LQ8WWM7 1075 aaKnown RBP23.86■■□□□ 1.41
CLDND1-216ENST00000507944 SEPT1Q8WYJ6 367 aa23.86■■□□□ 1.41
CLDND1-216ENST00000507944 PKD2L1Q9P0L9 805 aa23.86■■□□□ 1.41
CLDND1-216ENST00000507944 THEGQ9P2T0 379 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms