RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 HOXD8P13378 290 aaPredicted RBP16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 GNA11P29992 359 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 ZNF76P36508 570 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 NEK4P51957 841 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 PTPN11Q06124 597 aaPredicted RBP16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 SCRN1Q12765 414 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 PPIGQ13427 754 aaKnown RBP eCLIP16.16■□□□□ 0.186e-7■■■□□ 18.9
CCHCR1-222ENST00000507459 ANKRD1Q15327 319 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 PTGISQ16647 500 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 LRIT3Q3SXY7 679 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 C8orf34Q49A92 452 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 UTP14CQ5TAP6 766 aaKnown RBP16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 GDF6Q6KF10 455 aaPredicted RBP16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 TEX2Q8IWB9 1127 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 CCDC148Q8NFR7 591 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 CYP2W1Q8TAV3 490 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 RASGRP4Q8TDF6 673 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 SENP7Q9BQF6 1050 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 MXRA8Q9BRK3 442 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 HDAC6Q9UBN7 1215 aa16.16■□□□□ 0.18
CCHCR1-222ENST00000507459 LGALS2P05162 132 aa16.15■□□□□ 0.18
CCHCR1-222ENST00000507459 KCNA2P16389 499 aa16.15■□□□□ 0.18
CCHCR1-222ENST00000507459 SREBF1P36956 1147 aa16.15■□□□□ 0.18
CCHCR1-222ENST00000507459 NLRP5P59047 1200 aa16.15■□□□□ 0.18
CCHCR1-222ENST00000507459 REXO1Q8N1G1 1221 aaKnown RBP16.15■□□□□ 0.18
CCHCR1-222ENST00000507459 GIMAP8Q8ND71 665 aaPredicted RBP16.15■□□□□ 0.18
CCHCR1-222ENST00000507459 SCLYQ96I15 445 aa16.15■□□□□ 0.18
CCHCR1-222ENST00000507459 GPR20Q99678 358 aa16.15■□□□□ 0.18
CCHCR1-222ENST00000507459 C16orf70Q9BSU1 422 aa16.15■□□□□ 0.18
CCHCR1-222ENST00000507459 KCNH7Q9NS40 1196 aa16.15■□□□□ 0.18
CCHCR1-222ENST00000507459 H3BRB1 525 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 HAS3O00219 553 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 MAFGO15525 162 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 PFKFB2O60825 505 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 DEXIO95424 95 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 SLC34A2O95436 690 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 ARP10275 920 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 ARHGAP4P98171 946 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 CEP55Q53EZ4 464 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 C16orf59Q7L2K0 433 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 SESTD1Q86VW0 696 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 BICD2Q8TD16 824 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 RNPC3Q96LT9 517 aaKnown RBP16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 AIFM3Q96NN9 605 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.14■□□□□ 0.176e-7■■■□□ 16.7
CCHCR1-222ENST00000507459 WNT8AQ9H1J5 351 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 TUT1Q9H6E5 874 aaKnown RBP16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 GTF2IRD1Q9UHL9 959 aa16.14■□□□□ 0.17
CCHCR1-222ENST00000507459 SZT2Q5T011 3432 aa16.13■□□□□ 0.17
CCHCR1-222ENST00000507459 CDKL5O76039 1030 aa16.13■□□□□ 0.17
CCHCR1-222ENST00000507459 ZNF200P98182 395 aaPredicted RBP16.13■□□□□ 0.17
CCHCR1-222ENST00000507459 TRIM50Q86XT4 487 aa16.13■□□□□ 0.17
CCHCR1-222ENST00000507459 NECAB1Q8N987 351 aa16.13■□□□□ 0.17
CCHCR1-222ENST00000507459 RETREG2Q8NC44 543 aa16.13■□□□□ 0.17
CCHCR1-222ENST00000507459 IL17RAQ96F46 866 aa16.13■□□□□ 0.17
CCHCR1-222ENST00000507459 UIMC1Q96RL1 719 aa16.13■□□□□ 0.17
CCHCR1-222ENST00000507459 IL23AQ9NPF7 189 aa16.13■□□□□ 0.17
CCHCR1-222ENST00000507459 SH3GLB2Q9NR46 395 aa16.13■□□□□ 0.17
CCHCR1-222ENST00000507459 TCF7P36402 384 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-222ENST00000507459 BFSP2Q13515 415 aa16.12■□□□□ 0.17
CCHCR1-222ENST00000507459 ME3Q16798 604 aa16.12■□□□□ 0.17
CCHCR1-222ENST00000507459 TMEM240Q5SV17 173 aa16.12■□□□□ 0.17
CCHCR1-222ENST00000507459 MCTP2Q6DN12 878 aa16.12■□□□□ 0.17
CCHCR1-222ENST00000507459 ZNF365Q70YC5 407 aa16.12■□□□□ 0.17
CCHCR1-222ENST00000507459 PLA2G4DQ86XP0 818 aa16.12■□□□□ 0.17
CCHCR1-222ENST00000507459 SEPT1Q8WYJ6 367 aa16.12■□□□□ 0.17
CCHCR1-222ENST00000507459 SDF4Q9BRK5 362 aa16.12■□□□□ 0.17
CCHCR1-222ENST00000507459 GSTTP1A0A1W2PQM5 241 aa16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 FAM86B1E9PN63 330 aa16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 MEIS1O00470 390 aa16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 LARGE1O95461 756 aa16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 FAM86B2P0C5J1 330 aa16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 DEFB128Q7Z7B8 93 aa16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 CTAGE1Q96RT6 745 aa16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 AGO4Q9HCK5 861 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 JPH1Q9HDC5 661 aaPredicted RBP16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 SLC9A2Q9UBY0 812 aa16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 ZNF215Q9UL58 517 aaPredicted RBP16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 PCDHA4Q9UN74 947 aa16.11■□□□□ 0.17
CCHCR1-222ENST00000507459 C17orf102A2RUQ5 167 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 DDX39AO00148 427 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 FGBP02675 491 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 CYP3A4P08684 503 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 SMIM10L2AP0DMW4 78 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 SMIM10L2BP0DMW5 78 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 HIC1Q14526 733 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 PSRC1Q6PGN9 363 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 RPUSD2Q8IZ73 545 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 CCDC155Q8N6L0 562 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 CRYGNQ8WXF5 182 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 GLG1Q92896 1179 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 RNPEPQ9H4A4 650 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 KCNJ14Q9UNX9 436 aa16.1■□□□□ 0.17
CCHCR1-222ENST00000507459 TRIP12Q14669 1992 aaPredicted RBP16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 PITPNM1O00562 1244 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 IQCF3P0C7M6 154 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 MARK3P27448 753 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 ITGB3BPQ13352 177 aaPredicted RBP16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 PRR16Q569H4 304 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms