RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 ZNF76P36508 570 aa22.63■■□□□ 1.21
SNX25-204ENST00000506896 SP2Q02086 613 aa22.63■■□□□ 1.21
SNX25-204ENST00000506896 SEMA3FQ13275 785 aa22.63■■□□□ 1.21
SNX25-204ENST00000506896 NPY5RQ15761 445 aa22.63■■□□□ 1.21
SNX25-204ENST00000506896 AFG1LQ8WV93 481 aa22.63■■□□□ 1.21
SNX25-204ENST00000506896 BADQ92934 168 aa22.63■■□□□ 1.21
SNX25-204ENST00000506896 TMX3Q96JJ7 454 aa22.63■■□□□ 1.21
SNX25-204ENST00000506896 MLXIPQ9HAP2 919 aa22.63■■□□□ 1.21
SNX25-204ENST00000506896 BRMS1Q9HCU9 246 aa22.63■■□□□ 1.21
SNX25-204ENST00000506896 TMEM39AQ9NV64 488 aa22.63■■□□□ 1.21
SNX25-204ENST00000506896 CD2BP2O95400 341 aaKnown RBP22.62■■□□□ 1.21
SNX25-204ENST00000506896 CD4P01730 458 aa22.62■■□□□ 1.21
SNX25-204ENST00000506896 USP11P51784 963 aa22.62■■□□□ 1.21
SNX25-204ENST00000506896 PURAQ00577 322 aaKnown RBP22.62■■□□□ 1.21
SNX25-204ENST00000506896 ITGA7Q13683 1181 aa22.62■■□□□ 1.21
SNX25-204ENST00000506896 DGKDQ16760 1214 aa22.62■■□□□ 1.21
SNX25-204ENST00000506896 LRIT3Q3SXY7 679 aa22.62■■□□□ 1.21
SNX25-204ENST00000506896 METTL7BQ6UX53 244 aa22.62■■□□□ 1.21
SNX25-204ENST00000506896 FAM126BQ8IXS8 530 aa22.62■■□□□ 1.21
SNX25-204ENST00000506896 TBX21Q9UL17 535 aa22.62■■□□□ 1.21
SNX25-204ENST00000506896 SCN10AQ9Y5Y9 1956 aa22.61■■□□□ 1.21
SNX25-204ENST00000506896 MEIS1O00470 390 aa22.61■■□□□ 1.21
SNX25-204ENST00000506896 SOX1O00570 391 aaPredicted RBP22.61■■□□□ 1.21
SNX25-204ENST00000506896 DTNBO60941 627 aa22.61■■□□□ 1.21
SNX25-204ENST00000506896 MMP3P08254 477 aa22.61■■□□□ 1.21
SNX25-204ENST00000506896 KRT25Q7Z3Z0 450 aa22.61■■□□□ 1.21
SNX25-204ENST00000506896 FAM184AQ8NB25 1140 aa22.61■■□□□ 1.21
SNX25-204ENST00000506896 SPATA33Q96N06 139 aa22.61■■□□□ 1.21
SNX25-204ENST00000506896 MTG1Q9BT17 334 aaPredicted RBP22.61■■□□□ 1.21
SNX25-204ENST00000506896 KCNH7Q9NS40 1196 aa22.61■■□□□ 1.21
SNX25-204ENST00000506896 LAMA2P24043 3122 aaKnown RBP22.61■■□□□ 1.21
SNX25-204ENST00000506896 PPFIA4O75335 1185 aa22.6■■□□□ 1.21
SNX25-204ENST00000506896 MYL3P08590 195 aa22.6■■□□□ 1.21
SNX25-204ENST00000506896 CIITAP33076 1130 aa22.6■■□□□ 1.21
SNX25-204ENST00000506896 SETQ01105 290 aaPredicted RBP22.6■■□□□ 1.21
SNX25-204ENST00000506896 KIF3AQ9Y496 699 aa22.6■■□□□ 1.21
SNX25-204ENST00000506896 CCDC194A0A1B0GVG4 234 aa22.59■■□□□ 1.21
SNX25-204ENST00000506896 NOP56O00567 594 aaKnown RBP22.59■■□□□ 1.21
SNX25-204ENST00000506896 HOXD8P13378 290 aaPredicted RBP22.59■■□□□ 1.21
SNX25-204ENST00000506896 RAG1P15918 1043 aa22.59■■□□□ 1.21
SNX25-204ENST00000506896 KCNA2P16389 499 aa22.59■■□□□ 1.21
SNX25-204ENST00000506896 KRT2P35908 639 aa22.59■■□□□ 1.21
SNX25-204ENST00000506896 PSMC6P62333 389 aa22.59■■□□□ 1.21
SNX25-204ENST00000506896 NONOQ15233 471 aaKnown RBP eCLIP22.59■■□□□ 1.215e-6■■■■□ 20.4
SNX25-204ENST00000506896 CYFIP1Q7L576 1253 aa22.59■■□□□ 1.21
SNX25-204ENST00000506896 CYP2W1Q8TAV3 490 aa22.59■■□□□ 1.21
SNX25-204ENST00000506896 TBCKQ8TEA7 893 aa22.59■■□□□ 1.21
SNX25-204ENST00000506896 GJB4Q9NTQ9 266 aa22.59■■□□□ 1.21
SNX25-204ENST00000506896 FAM86B1E9PN63 330 aa22.58■■□□□ 1.21
SNX25-204ENST00000506896 TIMP1P01033 207 aa22.58■■□□□ 1.21
SNX25-204ENST00000506896 MMP1P03956 469 aa22.58■■□□□ 1.21
SNX25-204ENST00000506896 FAM86B2P0C5J1 330 aa22.58■■□□□ 1.21
SNX25-204ENST00000506896 HSDL1Q3SXM5 330 aa22.58■■□□□ 1.21
SNX25-204ENST00000506896 KRT40Q6A162 431 aa22.58■■□□□ 1.21
SNX25-204ENST00000506896 NFASCO94856 1347 aa22.57■■□□□ 1.2
SNX25-204ENST00000506896 IGLV3-22A0A075B6J6 115 aa22.57■■□□□ 1.2
SNX25-204ENST00000506896 TLR3O15455 904 aaKnown RBP22.57■■□□□ 1.2
SNX25-204ENST00000506896 ATP9AO75110 1047 aa22.57■■□□□ 1.2
SNX25-204ENST00000506896 SAFBQ15424 915 aaKnown RBP eCLIP22.57■■□□□ 1.2
SNX25-204ENST00000506896 MOXD1Q6UVY6 613 aa22.57■■□□□ 1.2
SNX25-204ENST00000506896 PLA2G4DQ86XP0 818 aa22.57■■□□□ 1.2
SNX25-204ENST00000506896 LRCH3Q96II8 777 aa22.57■■□□□ 1.2
SNX25-204ENST00000506896 C8orf76Q96K31 380 aa22.57■■□□□ 1.2
SNX25-204ENST00000506896 SDF4Q9BRK5 362 aa22.57■■□□□ 1.2
SNX25-204ENST00000506896 KATNAL1Q9BW62 490 aa22.57■■□□□ 1.2
SNX25-204ENST00000506896 AGO4Q9HCK5 861 aaKnown RBP22.57■■□□□ 1.2
SNX25-204ENST00000506896 SORBS3O60504 671 aa22.56■■□□□ 1.2
SNX25-204ENST00000506896 ARP10275 920 aa22.56■■□□□ 1.2
SNX25-204ENST00000506896 GPR20Q99678 358 aa22.56■■□□□ 1.2
SNX25-204ENST00000506896 JPH1Q9HDC5 661 aaPredicted RBP22.56■■□□□ 1.2
SNX25-204ENST00000506896 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.56■■□□□ 1.2
SNX25-204ENST00000506896 EPHB4P54760 987 aa22.55■■□□□ 1.2
SNX25-204ENST00000506896 SHHQ15465 462 aa22.55■■□□□ 1.2
SNX25-204ENST00000506896 PRR16Q569H4 304 aa22.55■■□□□ 1.2
SNX25-204ENST00000506896 C9orf50Q5SZB4 431 aa22.55■■□□□ 1.2
SNX25-204ENST00000506896 MFSD5Q6N075 450 aa22.55■■□□□ 1.2
SNX25-204ENST00000506896 NFRKBQ6P4R8 1299 aa22.55■■□□□ 1.2
SNX25-204ENST00000506896 OXER1Q8TDS5 423 aa22.55■■□□□ 1.2
SNX25-204ENST00000506896 NAP1L4Q99733 375 aaKnown RBP22.55■■□□□ 1.2
SNX25-204ENST00000506896 BCAS3Q9H6U6 928 aa22.55■■□□□ 1.2
SNX25-204ENST00000506896 CYP3A7-CYP3A51PA0A087WV96 503 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 IPO5O00410 1097 aaKnown RBP22.54■■□□□ 1.2
SNX25-204ENST00000506896 B4GALT4O60513 344 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 F2P00734 622 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 CYP3A7P24462 503 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 INF2Q27J81 1249 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 NBPF20Q3BBV1 942 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 GPR153Q6NV75 609 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 PIK3AP1Q6ZUJ8 805 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 DIS3L2Q8IYB7 885 aaKnown RBP22.54■■□□□ 1.2
SNX25-204ENST00000506896 FBXO18Q8NFZ0 1043 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 TNFRSF25Q93038 417 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 TRPV6Q9H1D0 765 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 PKD2L1Q9P0L9 805 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 SLC9A2Q9UBY0 812 aa22.54■■□□□ 1.2
SNX25-204ENST00000506896 GCFC2P16383 781 aaKnown RBP22.53■■□□□ 1.2
SNX25-204ENST00000506896 FOSBP53539 338 aa22.53■■□□□ 1.2
SNX25-204ENST00000506896 PTPN11Q06124 597 aaPredicted RBP22.53■■□□□ 1.2
SNX25-204ENST00000506896 NR5A1Q13285 461 aa22.53■■□□□ 1.2
SNX25-204ENST00000506896 NEK8Q86SG6 692 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms