RNA–Protein interactions for RNA: ENST00000506891.1

TTC39B-205, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-205ENST00000506891 PDRG1Q9NUG6 133 aa13.88□□□□□ -0.19
TTC39B-205ENST00000506891 HDAC6Q9UBN7 1215 aa13.88□□□□□ -0.19
TTC39B-205ENST00000506891 UMODL1Q5DID0 1318 aa13.88□□□□□ -0.19
TTC39B-205ENST00000506891 hCG_1642624A0A1W2PR95 340 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 H3BRB1 525 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 NOP56O00567 594 aaKnown RBP13.87□□□□□ -0.19
TTC39B-205ENST00000506891 CDKL5O76039 1030 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 ACTN1P12814 892 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 ADD1P35611 737 aaKnown RBP13.87□□□□□ -0.19
TTC39B-205ENST00000506891 SEMA3FQ13275 785 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 PTK7Q13308 1070 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 TOB2Q14106 344 aaPredicted RBP13.87□□□□□ -0.19
TTC39B-205ENST00000506891 NTRK3Q16288 839 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 WWC2Q6AWC2 1192 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 CYFIP1Q7L576 1253 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 AFAP1L1Q8TED9 768 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 GPKOWQ92917 476 aaPredicted RBP eCLIP13.87□□□□□ -0.19
TTC39B-205ENST00000506891 ZFP91Q96JP5 570 aaPredicted RBP13.87□□□□□ -0.19
TTC39B-205ENST00000506891 ALG1Q9BT22 464 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 ZMYND12Q9H0C1 365 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 TUT1Q9H6E5 874 aaKnown RBP13.87□□□□□ -0.19
TTC39B-205ENST00000506891 JADE2Q9NQC1 790 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 UBIAD1Q9Y5Z9 338 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 SZT2Q5T011 3432 aa13.87□□□□□ -0.19
TTC39B-205ENST00000506891 SMCO2A6NFE2 343 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 STXBP3O00186 592 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 CPLX1O14810 134 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 GNAT1P11488 350 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 CPA1P15085 419 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 CHMP4BP1P59074 171 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 GALNT17Q6IS24 598 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 PHOSPHO2Q8TCD6 241 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 VWCEQ96DN2 955 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 SCLYQ96I15 445 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 GPR20Q99678 358 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 C22orf23Q9BZE7 217 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 C6orf50Q9HD87 102 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 MSRAQ9UJ68 235 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 NAP1L2Q9ULW6 460 aaPredicted RBP13.86□□□□□ -0.19
TTC39B-205ENST00000506891 SLC4A7Q9Y6M7 1214 aa13.86□□□□□ -0.19
TTC39B-205ENST00000506891 LTBP2Q14767 1821 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 SELPP16109 830 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 ITGB5P18084 799 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 DNAJB2P25686 324 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 CLK2P49760 499 aaKnown RBP13.85□□□□□ -0.19
TTC39B-205ENST00000506891 RAB30Q15771 203 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 NIPA1Q7RTP0 329 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 OTOP2Q7RTS6 562 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 SEPT1Q8WYJ6 367 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 TIFAQ96CG3 184 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 GUCD1Q96NT3 240 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 CTAGE1Q96RT6 745 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 CDX2Q99626 313 aaPredicted RBP13.85□□□□□ -0.19
TTC39B-205ENST00000506891 MXRA8Q9BRK3 442 aa13.85□□□□□ -0.19
TTC39B-205ENST00000506891 C17orf102A2RUQ5 167 aa13.84□□□□□ -0.19
TTC39B-205ENST00000506891 DEXIO95424 95 aa13.84□□□□□ -0.19
TTC39B-205ENST00000506891 LGALS2P05162 132 aa13.84□□□□□ -0.19
TTC39B-205ENST00000506891 ZNF286BP0CG31 522 aa13.84□□□□□ -0.19
TTC39B-205ENST00000506891 HOXC8P31273 242 aa13.84□□□□□ -0.19
TTC39B-205ENST00000506891 SREBF1P36956 1147 aa13.84□□□□□ -0.19
TTC39B-205ENST00000506891 MTMR1Q13613 665 aa13.84□□□□□ -0.19
TTC39B-205ENST00000506891 UBE2SQ16763 222 aa13.84□□□□□ -0.19
TTC39B-205ENST00000506891 TYW1BQ6NUM6 668 aa13.84□□□□□ -0.19
TTC39B-205ENST00000506891 PBX4Q9BYU1 374 aa13.84□□□□□ -0.19
TTC39B-205ENST00000506891 UPF3BQ9BZI7 483 aaKnown RBP13.84□□□□□ -0.19
TTC39B-205ENST00000506891 FTOQ9C0B1 505 aaKnown RBP eCLIP13.84□□□□□ -0.19
TTC39B-205ENST00000506891 TTYH1Q9H313 450 aaPredicted RBP13.84□□□□□ -0.19
TTC39B-205ENST00000506891 BCAS3Q9H6U6 928 aa13.84□□□□□ -0.19
TTC39B-205ENST00000506891 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
TTC39B-205ENST00000506891 ZNF215Q9UL58 517 aaPredicted RBP13.84□□□□□ -0.19
TTC39B-205ENST00000506891 SORBS3O60504 671 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 ATP9AO75110 1047 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 CAND2O75155 1236 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 BAIAP3O94812 1187 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 CYP3A4P08684 503 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 CKBP12277 381 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 KCNA2P16389 499 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 SSRP1Q08945 709 aaKnown RBP13.83□□□□□ -0.2
TTC39B-205ENST00000506891 PKN1Q16512 942 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 CEP55Q53EZ4 464 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 DEFB128Q7Z7B8 93 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 REXO1Q8N1G1 1221 aaKnown RBP13.83□□□□□ -0.2
TTC39B-205ENST00000506891 PPP1R13LQ8WUF5 828 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 TNPO1Q92973 898 aaKnown RBP13.83□□□□□ -0.2
TTC39B-205ENST00000506891 FAM161BQ96MY7 647 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 RNPEPQ9H4A4 650 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 ZNF576Q9H609 170 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 STK36Q9NRP7 1315 aa13.83□□□□□ -0.2
TTC39B-205ENST00000506891 GRXCR1A8MXD5 290 aa13.82□□□□□ -0.2
TTC39B-205ENST00000506891 MEIS1O00470 390 aa13.82□□□□□ -0.2
TTC39B-205ENST00000506891 PFKFB2O60825 505 aa13.82□□□□□ -0.2
TTC39B-205ENST00000506891 EFCAB14O75071 495 aa13.82□□□□□ -0.2
TTC39B-205ENST00000506891 CXCL10P02778 98 aa13.82□□□□□ -0.2
TTC39B-205ENST00000506891 ATP2A2P16615 1042 aaKnown RBP13.82□□□□□ -0.2
TTC39B-205ENST00000506891 XBP1P17861 261 aa13.82□□□□□ -0.2
TTC39B-205ENST00000506891 GPNMBQ14956 572 aa13.82□□□□□ -0.2
TTC39B-205ENST00000506891 TRIM71Q2Q1W2 868 aaKnown RBP13.82□□□□□ -0.2
TTC39B-205ENST00000506891 LRRC8DQ7L1W4 858 aa13.82□□□□□ -0.2
TTC39B-205ENST00000506891 SERINC5Q86VE9 423 aa13.82□□□□□ -0.2
TTC39B-205ENST00000506891 SLC17A8Q8NDX2 589 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms