RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 FARP2O94887 1054 aaPredicted RBP9.58□□□□□ -0.88
PDGFC-205ENST00000506880 ATG7O95352 703 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 SLC34A2O95436 690 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 TFRCP02786 760 aaKnown RBP9.58□□□□□ -0.88
PDGFC-205ENST00000506880 COL6A1P12109 1028 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 KCNA2P16389 499 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 SMPD1P17405 629 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 UBA1P22314 1058 aaKnown RBP9.58□□□□□ -0.88
PDGFC-205ENST00000506880 CCND3P30281 292 aaPredicted RBP9.58□□□□□ -0.88
PDGFC-205ENST00000506880 NUCB2P80303 420 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 ARHGAP1Q07960 439 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 SNX17Q15036 470 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 LRRC41Q15345 812 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 MTFR1Q15390 333 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 CCSAPQ6IQ19 270 aaPredicted RBP9.58□□□□□ -0.88
PDGFC-205ENST00000506880 NFRKBQ6P4R8 1299 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 PLPPR4Q7Z2D5 763 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 OR6J1Q8NGC5 347 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 AFAP1L1Q8TED9 768 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 SEPT1Q8WYJ6 367 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 SLC5A5Q92911 643 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 GLT1D1Q96MS3 346 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 MLXIPQ9HAP2 919 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 AGO4Q9HCK5 861 aaKnown RBP9.58□□□□□ -0.88
PDGFC-205ENST00000506880 JPH1Q9HDC5 661 aaPredicted RBP9.58□□□□□ -0.88
PDGFC-205ENST00000506880 KCNMB3Q9NPA1 279 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 DDX25Q9UHL0 483 aaKnown RBP9.58□□□□□ -0.88
PDGFC-205ENST00000506880 MYH15Q9Y2K3 1946 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 WDR64B1ANS9 1081 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 NOP56O00567 594 aaKnown RBP9.57□□□□□ -0.88
PDGFC-205ENST00000506880 NEMFO60524 1076 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 CAND2O75155 1236 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 PARNO95453 639 aaKnown RBP9.57□□□□□ -0.88
PDGFC-205ENST00000506880 SUPT20HL2P0C7V6 817 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 GNAT1P11488 350 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 SYT1P21579 422 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 ADCYAP1R1P41586 468 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 PPP2R5CQ13362 524 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 PDIA5Q14554 519 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 GNASQ5JWF2 1037 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 SEPT14Q6ZU15 432 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 PIK3AP1Q6ZUJ8 805 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 IL31RAQ8NI17 732 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 ETNPPLQ8TBG4 499 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 LENG9Q96B70 501 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 SHISA4Q96DD7 197 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 FAM167AQ96KS9 214 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 AIFM3Q96NN9 605 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 ZNF577Q9BSK1 485 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 MTG1Q9BT17 334 aaPredicted RBP9.57□□□□□ -0.88
PDGFC-205ENST00000506880 TEKT3Q9BXF9 490 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 SMARCAD1Q9H4L7 1026 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 SLC9A2Q9UBY0 812 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 KCNJ14Q9UNX9 436 aa9.57□□□□□ -0.88
PDGFC-205ENST00000506880 COL1A2P08123 1366 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 IGKV6D-21A0A0A0MT36 114 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 A0A0U1RQG5 324 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-205ENST00000506880 FAM86B1E9PN63 330 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 DYNC1LI2O43237 492 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-205ENST00000506880 GAS7O60861 476 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 LGR5O75473 907 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 PSMD10O75832 226 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 GGPS1O95749 300 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 F2P00734 622 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 MMP3P08254 477 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 FAM86B2P0C5J1 330 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 C6orf222P0C671 652 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-205ENST00000506880 XRCC6P12956 609 aaKnown RBP eCLIP9.56□□□□□ -0.88
PDGFC-205ENST00000506880 TAL1P17542 331 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-205ENST00000506880 ACLYP53396 1101 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 TRIM32Q13049 653 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 SEMA3FQ13275 785 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 INF2Q27J81 1249 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 TMEM266Q2M3C6 531 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 LETM2Q2VYF4 491 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 PRR16Q569H4 304 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 FAM160B1Q5W0V3 765 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 MIS18BP1Q6P0N0 1132 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 B3GNT9Q6UX72 402 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 ANKRD33Q7Z3H0 272 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 SLC43A3Q8NBI5 491 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 AK8Q96MA6 479 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 SPATA33Q96N06 139 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 AZI2Q9H6S1 392 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.56□□□□□ -0.88
PDGFC-205ENST00000506880 ERAP1Q9NZ08 941 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 PCDHA10Q9Y5I2 948 aa9.56□□□□□ -0.88
PDGFC-205ENST00000506880 BRCA2P51587 3418 aa9.55□□□□□ -0.88
PDGFC-205ENST00000506880 RRN3P2A6NIE6 340 aa9.55□□□□□ -0.88
PDGFC-205ENST00000506880 CTAGE5O15320 804 aa9.55□□□□□ -0.88
PDGFC-205ENST00000506880 GAS2O43903 313 aaKnown RBP9.55□□□□□ -0.88
PDGFC-205ENST00000506880 CCNT1O60563 726 aaKnown RBP9.55□□□□□ -0.88
PDGFC-205ENST00000506880 PSAPP07602 524 aa9.55□□□□□ -0.88
PDGFC-205ENST00000506880 FXR2P51116 673 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDGFC-205ENST00000506880 PURAQ00577 322 aaKnown RBP9.55□□□□□ -0.88
PDGFC-205ENST00000506880 CDC42EP1Q00587 391 aa9.55□□□□□ -0.88
PDGFC-205ENST00000506880 NR5A1Q13285 461 aa9.55□□□□□ -0.88
PDGFC-205ENST00000506880 CALCRLQ16602 461 aa9.55□□□□□ -0.88
PDGFC-205ENST00000506880 TTC38Q5R3I4 469 aa9.55□□□□□ -0.88
PDGFC-205ENST00000506880 PRAMEF19Q5SWL8 479 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms