RNA–Protein interactions for RNA: ENST00000506787.5

UBE2B-205, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-205ENST00000506787 ASIC4Q96FT7 647 aa12.12□□□□□ -0.47
UBE2B-205ENST00000506787 CCDC17Q96LX7 622 aa12.12□□□□□ -0.47
UBE2B-205ENST00000506787 CTAGE1Q96RT6 745 aa12.12□□□□□ -0.47
UBE2B-205ENST00000506787 MTG1Q9BT17 334 aaPredicted RBP12.12□□□□□ -0.47
UBE2B-205ENST00000506787 SLC38A10Q9HBR0 1119 aa12.12□□□□□ -0.47
UBE2B-205ENST00000506787 GPR108Q9NPR9 543 aa12.12□□□□□ -0.47
UBE2B-205ENST00000506787 POLR3EQ9NVU0 708 aa12.12□□□□□ -0.47
UBE2B-205ENST00000506787 CHD6Q8TD26 2715 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 MAGEB6P1A0A0J9YX57 407 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 PNMA6EA0A0J9YXQ4 647 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 ABHD14A-ACY1A0A1B0GW23 586 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 H3BNC9 293 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 NBNO60934 754 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 CXCL10P02778 98 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 MYL3P08590 195 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 NBL1P41271 181 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 SMAD4Q13485 552 aaKnown RBP12.11□□□□□ -0.47
UBE2B-205ENST00000506787 MRPL14Q6P1L8 145 aaKnown RBP12.11□□□□□ -0.47
UBE2B-205ENST00000506787 KANSL2Q9H9L4 492 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 A1CFQ9NQ94 594 aaKnown RBP12.11□□□□□ -0.47
UBE2B-205ENST00000506787 HOMER2Q9NSB8 354 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 TLR7Q9NYK1 1049 aaKnown RBP12.11□□□□□ -0.47
UBE2B-205ENST00000506787 DBNLQ9UJU6 430 aaKnown RBP12.11□□□□□ -0.47
UBE2B-205ENST00000506787 INSL6Q9Y581 213 aa12.11□□□□□ -0.47
UBE2B-205ENST00000506787 ATG2AQ2TAZ0 1938 aa12.1□□□□□ -0.47
UBE2B-205ENST00000506787 ZBED4O75132 1171 aa12.1□□□□□ -0.47
UBE2B-205ENST00000506787 TBX10O75333 385 aa12.1□□□□□ -0.47
UBE2B-205ENST00000506787 CDK8P49336 464 aa12.1□□□□□ -0.47
UBE2B-205ENST00000506787 HTRA4P83105 476 aaPredicted RBP12.1□□□□□ -0.47
UBE2B-205ENST00000506787 SIGLEC14Q08ET2 396 aa12.1□□□□□ -0.47
UBE2B-205ENST00000506787 GPM6BQ13491 265 aa12.1□□□□□ -0.47
UBE2B-205ENST00000506787 DUSP28Q4G0W2 176 aa12.1□□□□□ -0.47
UBE2B-205ENST00000506787 KIAA1211Q6ZU35 1233 aa12.1□□□□□ -0.47
UBE2B-205ENST00000506787 AFAP1L1Q8TED9 768 aa12.1□□□□□ -0.47
UBE2B-205ENST00000506787 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.1□□□□□ -0.47
UBE2B-205ENST00000506787 CRNKL1Q9BZJ0 848 aaKnown RBP12.1□□□□□ -0.47
UBE2B-205ENST00000506787 CHD8Q9HCK8 2581 aa12.1□□□□□ -0.47
UBE2B-205ENST00000506787 ACACBO00763 2458 aa12.09□□□□□ -0.47
UBE2B-205ENST00000506787 CYP2D7A0A087X1C5 515 aa12.09□□□□□ -0.47
UBE2B-205ENST00000506787 LOC730098B7Z3J9 87 aa12.09□□□□□ -0.47
UBE2B-205ENST00000506787 NCK2O43639 380 aa12.09□□□□□ -0.47
UBE2B-205ENST00000506787 NDUFB10O96000 172 aa12.09□□□□□ -0.47
UBE2B-205ENST00000506787 PTPN11Q06124 597 aaPredicted RBP12.09□□□□□ -0.47
UBE2B-205ENST00000506787 HYAL1Q12794 435 aa12.09□□□□□ -0.47
UBE2B-205ENST00000506787 TMED8Q6PL24 325 aaPredicted RBP12.09□□□□□ -0.47
UBE2B-205ENST00000506787 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.09□□□□□ -0.47
UBE2B-205ENST00000506787 CAGE1Q8TC20 777 aa12.09□□□□□ -0.47
UBE2B-205ENST00000506787 DHX38Q92620 1227 aaKnown RBP12.09□□□□□ -0.47
UBE2B-205ENST00000506787 DCTPP1Q9H773 170 aa12.09□□□□□ -0.47
UBE2B-205ENST00000506787 ACAD9Q9H845 621 aa12.09□□□□□ -0.47
UBE2B-205ENST00000506787 USP17L12C9JPN9 530 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 USP17L21D6R901 530 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 F5H6K3 240 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 GNAI3P08754 354 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 SELPP16109 830 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 CPT1AP50416 773 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 OAZ1P54368 228 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 KLRC3Q07444 240 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 NNTQ13423 1086 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 CBX2Q14781 532 aaPredicted RBP12.08□□□□□ -0.48
UBE2B-205ENST00000506787 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 LRRC8DQ7L1W4 858 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 ADSSL1Q8N142 457 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 LCORLQ8N3X6 602 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 CNTNAP3BQ96NU0 1288 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 SAMD11Q96NU1 681 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 CNTNAP3Q9BZ76 1288 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 VTA1Q9NP79 307 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 NOD1Q9Y239 953 aa12.08□□□□□ -0.48
UBE2B-205ENST00000506787 CTDP1Q9Y5B0 961 aaPredicted RBP12.08□□□□□ -0.48
UBE2B-205ENST00000506787 EP300Q09472 2414 aaPredicted RBP12.08□□□□□ -0.48
UBE2B-205ENST00000506787 EFCAB14O75071 495 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 PDGFBP01127 241 aaPredicted RBP12.07□□□□□ -0.48
UBE2B-205ENST00000506787 VARSP26640 1264 aaKnown RBP12.07□□□□□ -0.48
UBE2B-205ENST00000506787 GTF2F1P35269 517 aaKnown RBP eCLIP12.07□□□□□ -0.48
UBE2B-205ENST00000506787 RBL2Q08999 1139 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 KCNMA1Q12791 1236 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 IKBKEQ14164 716 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 PTGISQ16647 500 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 C12orf60Q5U649 245 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 MICAL3Q7RTP6 2002 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 TMEM192Q8IY95 271 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 CCDC155Q8N6L0 562 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 MORC4Q8TE76 937 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 RMDN1Q96DB5 314 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 PURBQ96QR8 312 aaKnown RBP12.07□□□□□ -0.48
UBE2B-205ENST00000506787 CD207Q9UJ71 328 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 LCTP09848 1927 aa12.07□□□□□ -0.48
UBE2B-205ENST00000506787 GREB1LQ9C091 1923 aaPredicted RBP12.07□□□□□ -0.48
UBE2B-205ENST00000506787 BAZ2AQ9UIF9 1905 aaKnown RBP12.06□□□□□ -0.48
UBE2B-205ENST00000506787 LINC01565O15544 149 aa12.06□□□□□ -0.48
UBE2B-205ENST00000506787 PRKAB2O43741 272 aa12.06□□□□□ -0.48
UBE2B-205ENST00000506787 PARNO95453 639 aaKnown RBP12.06□□□□□ -0.48
UBE2B-205ENST00000506787 EYA4O95677 639 aa12.06□□□□□ -0.48
UBE2B-205ENST00000506787 GNAI2P04899 355 aa12.06□□□□□ -0.48
UBE2B-205ENST00000506787 CKBP12277 381 aa12.06□□□□□ -0.48
UBE2B-205ENST00000506787 PDE6AP16499 860 aa12.06□□□□□ -0.48
UBE2B-205ENST00000506787 ATP8B2P98198 1209 aa12.06□□□□□ -0.48
UBE2B-205ENST00000506787 MBTPS1Q14703 1052 aa12.06□□□□□ -0.48
UBE2B-205ENST00000506787 PTPRNQ16849 979 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms