RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 TTC38Q5R3I4 469 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 CCSAPQ6IQ19 270 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-210ENST00000506767 METTL7BQ6UX53 244 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 CYFIP1Q7L576 1253 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 DHX37Q8IY37 1157 aaKnown RBP14.56□□□□□ -0.08
TCOF1-210ENST00000506767 OR6J1Q8NGC5 347 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 ETNPPLQ8TBG4 499 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 SLC5A5Q92911 643 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 ZNF577Q9BSK1 485 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 AP5M1Q9H0R1 490 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 ZDHHC9Q9Y397 364 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 BRD1O95696 1058 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 TFRCP02786 760 aaKnown RBP14.55□□□□□ -0.08
TCOF1-210ENST00000506767 ATP2B1P20020 1258 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-210ENST00000506767 HSDL1Q3SXM5 330 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 POTEDQ86YR6 584 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 C4orf32Q8N8J7 132 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 ANKLE1Q8NAG6 615 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 ARRDC4Q8NCT1 418 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 PPTC7Q8NI37 304 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 HAS1Q92839 578 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 FAM20AQ96MK3 541 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 MTMR9Q96QG7 549 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 RIT2Q99578 217 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 MLXIPQ9HAP2 919 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 SPC25Q9HBM1 224 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.55□□□□□ -0.08
TCOF1-210ENST00000506767 TBC1D22BQ9NU19 505 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 PCDHB6Q9Y5E3 794 aa14.55□□□□□ -0.08
TCOF1-210ENST00000506767 PDE4DIPQ5VU43 2346 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 NEMFO60524 1076 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 PSMD10O75832 226 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 F13A1P00488 732 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 C6orf222P0C671 652 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-210ENST00000506767 HOXD8P13378 290 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-210ENST00000506767 MCM7P33993 719 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 CPT1AP50416 773 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 NBR1Q14596 966 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 ZNF174Q15697 407 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 FSCN1Q16658 493 aaKnown RBP14.54□□□□□ -0.08
TCOF1-210ENST00000506767 B3GNT9Q6UX72 402 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 RNF180Q86T96 592 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 AFG1LQ8WV93 481 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 SDF4Q9BRK5 362 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 TSEN34Q9BSV6 310 aaKnown RBP14.54□□□□□ -0.08
TCOF1-210ENST00000506767 TMEM60Q9H2L4 133 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 PKD2L1Q9P0L9 805 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 TELO2Q9Y4R8 837 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 MYH15Q9Y2K3 1946 aa14.54□□□□□ -0.08
TCOF1-210ENST00000506767 DNM1LO00429 736 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 SORBS3O60504 671 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 ATG7O95352 703 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 MMP3P08254 477 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 EN2P19622 333 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-210ENST00000506767 BEX3Q00994 111 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 KCNA10Q16322 511 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 GNASQ5JWF2 1037 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 FAM173BQ6P4H8 233 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 GJA10Q969M2 543 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 SPATA33Q96N06 139 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 UIMC1Q96RL1 719 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 GPR20Q99678 358 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 JPH1Q9HDC5 661 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-210ENST00000506767 SLC9A2Q9UBY0 812 aa14.53□□□□□ -0.08
TCOF1-210ENST00000506767 GSTTP1A0A1W2PQM5 241 aa14.52□□□□□ -0.09
TCOF1-210ENST00000506767 PPFIA4O75335 1185 aa14.52□□□□□ -0.09
TCOF1-210ENST00000506767 CCNE2O96020 404 aa14.52□□□□□ -0.09
TCOF1-210ENST00000506767 CALCRLQ16602 461 aa14.52□□□□□ -0.09
TCOF1-210ENST00000506767 LRCH2Q5VUJ6 765 aa14.52□□□□□ -0.09
TCOF1-210ENST00000506767 ZNF746Q6NUN9 644 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-210ENST00000506767 SLFN12Q8IYM2 578 aa14.52□□□□□ -0.09
TCOF1-210ENST00000506767 PCSK9Q8NBP7 692 aaKnown RBP14.52□□□□□ -0.09
TCOF1-210ENST00000506767 TEKT3Q9BXF9 490 aa14.52□□□□□ -0.09
TCOF1-210ENST00000506767 DAXXQ9UER7 740 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-210ENST00000506767 PHF24Q9UPV7 400 aa14.52□□□□□ -0.09
TCOF1-210ENST00000506767 MOXD2PA6NHM9 499 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 KBTBD13C9JR72 458 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 LAD1O00515 517 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 ZEB2O60315 1214 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 KPNA6O60684 536 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 GAS7O60861 476 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 BAG4O95429 457 aaKnown RBP14.51□□□□□ -0.09
TCOF1-210ENST00000506767 ASGR1P07306 291 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 COL6A1P12109 1028 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 ACLYP53396 1101 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 ACTR2P61160 394 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 KRT76Q01546 638 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 SPIRE1Q08AE8 756 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 PTGDRQ13258 359 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 DGKDQ16760 1214 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 BRDTQ58F21 947 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-210ENST00000506767 FOXD4L5Q5VV16 416 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-210ENST00000506767 UBE2Q1Q7Z7E8 422 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 FOXD4L4Q8WXT5 416 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-210ENST00000506767 SEPT1Q8WYJ6 367 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 IPO9Q96P70 1041 aaKnown RBP14.51□□□□□ -0.09
TCOF1-210ENST00000506767 POLR3EQ9NVU0 708 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 VAV3Q9UKW4 847 aa14.51□□□□□ -0.09
TCOF1-210ENST00000506767 BRCA2P51587 3418 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms