RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SORBS3O60504 671 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 LGALS2P05162 132 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 ITGB5P18084 799 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 RPS6KB1P23443 525 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 APOBRQ0VD83 1088 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 HIC1Q14526 733 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 GPNMBQ14956 572 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 TRIM71Q2Q1W2 868 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 ERICH6BQ5W0A0 696 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 BLOC1S2Q6QNY1 142 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 CYFIP1Q7L576 1253 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 OTOP2Q7RTS6 562 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 C7orf31Q8N865 590 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 GPR20Q99678 358 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 ALG1Q9BT22 464 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 PBX4Q9BYU1 374 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 RIC8AQ9NPQ8 531 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 PCDHA6Q9UN73 950 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 NOD1Q9Y239 953 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 TELO2Q9Y4R8 837 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 PCDHA8Q9Y5H6 950 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 UBIAD1Q9Y5Z9 338 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 V9GY48 417 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 GBF1Q92538 1859 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 H3BRB1 525 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 STXBP3O00186 592 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 KCNA2P16389 499 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 ADD1P35611 737 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 PBX2P40425 430 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 CLK2P49760 499 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 METAP2P50579 478 aaKnown RBP eCLIP10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 NAPAP54920 295 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 EVCP57679 992 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 CHMP4BP1P59074 171 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 ZNF200P98182 395 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 C1QBPQ07021 282 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 PTK7Q13308 1070 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 TRAF7Q6Q0C0 670 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 Q6ZUG5 572 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 DEFB128Q7Z7B8 93 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 NLRX1Q86UT6 975 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 CCDC155Q8N6L0 562 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 RETREG2Q8NC44 543 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 AFAP1L1Q8TED9 768 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 BRF1Q92994 677 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 WNT8BQ93098 351 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 TIFAQ96CG3 184 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 CDHR1Q96JP9 859 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 USP26Q9BXU7 913 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 ZNF576Q9H609 170 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 TUT1Q9H6E5 874 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 BARHL2Q9NY43 387 aa10.41□□□□□ -0.74
PDLIM5-209ENST00000506632 CCDC196A0A1B0GTZ2 297 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 SPDYE3A6NKU9 549 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 NOP56O00567 594 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 MAFGO15525 162 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 ATP9AO75110 1047 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 PARNO95453 639 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 FOSP01100 380 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 CXCL10P02778 98 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 CKBP12277 381 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 SELPP16109 830 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 PSMA5P28066 241 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 GRIN2CQ14957 1233 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 RAB30Q15771 203 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 NTRK3Q16288 839 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 PFKFB3Q16875 520 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 LRRC8DQ7L1W4 858 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 SERINC5Q86VE9 423 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 GIMAP8Q8ND71 665 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 SLC4A7Q9Y6M7 1214 aa10.4□□□□□ -0.74
PDLIM5-209ENST00000506632 COL6A3P12111 3177 aa10.4□□□□□ -0.75
PDLIM5-209ENST00000506632 ESYT2A0FGR8 921 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 SMCO2A6NFE2 343 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 NBNO60934 754 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 SMIM10L2AP0DMW4 78 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 SMIM10L2BP0DMW5 78 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 ACTN1P12814 892 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 SCG2P13521 617 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 SREBF1P36956 1147 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 ADCY7P51828 1080 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 ADAM17P78536 824 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 FGD1P98174 961 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 AP3B2Q13367 1082 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 MTMR1Q13613 665 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 MBTPS1Q14703 1052 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 PKN1Q16512 942 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 TMEM132AQ24JP5 1023 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 TRIM50Q86XT4 487 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 CRYGNQ8WXF5 182 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 MYLIPQ8WY64 445 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 RNF25Q96BH1 459 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 ANO3Q9BYT9 981 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 TM6SF1Q9BZW5 370 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 GLT8D2Q9H1C3 349 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 RNPEPQ9H4A4 650 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 EHMT1Q9H9B1 1298 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 JADE2Q9NQC1 790 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms