RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 CPLX2Q6PUV4 134 aaKnown RBP17.81■□□□□ 0.44
CLDND1-211ENST00000506575 ZNF365Q70YC5 407 aa17.81■□□□□ 0.44
CLDND1-211ENST00000506575 C16orf59Q7L2K0 433 aa17.81■□□□□ 0.44
CLDND1-211ENST00000506575 TRIM22Q8IYM9 498 aa17.81■□□□□ 0.44
CLDND1-211ENST00000506575 DEFB123Q8N688 67 aa17.81■□□□□ 0.44
CLDND1-211ENST00000506575 SCLYQ96I15 445 aa17.81■□□□□ 0.44
CLDND1-211ENST00000506575 PGBD1Q96JS3 809 aa17.81■□□□□ 0.44
CLDND1-211ENST00000506575 HDAC6Q9UBN7 1215 aa17.81■□□□□ 0.44
CLDND1-211ENST00000506575 GTF2IRD1Q9UHL9 959 aa17.81■□□□□ 0.44
CLDND1-211ENST00000506575 ESYT2A0FGR8 921 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 H3BRB1 525 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 HAS3O00219 553 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 PITPNM1O00562 1244 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 PPFIA3O75145 1194 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 FGBP02675 491 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 LGALS2P05162 132 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 GNA11P29992 359 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 SMAD3P84022 425 aaKnown RBP17.8■□□□□ 0.44
CLDND1-211ENST00000506575 STK3Q13188 491 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 NTRK3Q16288 839 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 PKN1Q16512 942 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 MCTP2Q6DN12 878 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 CCDC148Q8NFR7 591 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 GPR20Q99678 358 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 LARP6Q9BRS8 491 aaKnown RBP17.8■□□□□ 0.44
CLDND1-211ENST00000506575 C16orf70Q9BSU1 422 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 ZMYND12Q9H0C1 365 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 MTIF3Q9H2K0 278 aaKnown RBP17.8■□□□□ 0.44
CLDND1-211ENST00000506575 TUT1Q9H6E5 874 aaKnown RBP17.8■□□□□ 0.44
CLDND1-211ENST00000506575 JADE2Q9NQC1 790 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 TMEM260Q9NX78 707 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 PKD2L1Q9P0L9 805 aa17.8■□□□□ 0.44
CLDND1-211ENST00000506575 TRIP12Q14669 1992 aaPredicted RBP17.79■□□□□ 0.44
CLDND1-211ENST00000506575 ZNF76P36508 570 aa17.79■□□□□ 0.44
CLDND1-211ENST00000506575 CLK2P49760 499 aaKnown RBP17.79■□□□□ 0.44
CLDND1-211ENST00000506575 SSRP1Q08945 709 aaKnown RBP17.79■□□□□ 0.44
CLDND1-211ENST00000506575 JAKMIP3Q5VZ66 844 aa17.79■□□□□ 0.44
CLDND1-211ENST00000506575 REXO1Q8N1G1 1221 aaKnown RBP17.79■□□□□ 0.44
CLDND1-211ENST00000506575 CAGE1Q8TC20 777 aa17.79■□□□□ 0.44
CLDND1-211ENST00000506575 BICD2Q8TD16 824 aa17.79■□□□□ 0.44
CLDND1-211ENST00000506575 MXRA8Q9BRK3 442 aa17.79■□□□□ 0.44
CLDND1-211ENST00000506575 ZNF215Q9UL58 517 aaPredicted RBP17.79■□□□□ 0.44
CLDND1-211ENST00000506575 TANC1Q9C0D5 1861 aa17.79■□□□□ 0.44
CLDND1-211ENST00000506575 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.78■□□□□ 0.44
CLDND1-211ENST00000506575 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.78■□□□□ 0.44
CLDND1-211ENST00000506575 ATP9AO75110 1047 aa17.78■□□□□ 0.44
CLDND1-211ENST00000506575 PFKMP08237 780 aa17.78■□□□□ 0.44
CLDND1-211ENST00000506575 KCNA2P16389 499 aa17.78■□□□□ 0.44
CLDND1-211ENST00000506575 RFC2P35250 354 aa17.78■□□□□ 0.44
CLDND1-211ENST00000506575 SREBF1P36956 1147 aa17.78■□□□□ 0.44
CLDND1-211ENST00000506575 UTP14CQ5TAP6 766 aaKnown RBP17.78■□□□□ 0.44
CLDND1-211ENST00000506575 Q7L0L9 218 aa17.78■□□□□ 0.44
CLDND1-211ENST00000506575 SCN5AQ14524 2016 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 C17orf102A2RUQ5 167 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 ARHGAP4P98171 946 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 PTK7Q13308 1070 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 ANKRD1Q15327 319 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 CEP55Q53EZ4 464 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 ZNF697Q5TEC3 545 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 FAM109BQ6ICB4 259 aaPredicted RBP17.77■□□□□ 0.44
CLDND1-211ENST00000506575 DEFB128Q7Z7B8 93 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 AFAP1L1Q8TED9 768 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 HERVK_113Q902F9 699 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 SDF4Q9BRK5 362 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 KCNH7Q9NS40 1196 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 VPS54Q9P1Q0 977 aa17.77■□□□□ 0.44
CLDND1-211ENST00000506575 KAT6AQ92794 2004 aa17.76■□□□□ 0.43
CLDND1-211ENST00000506575 CDKL5O76039 1030 aa17.76■□□□□ 0.43
CLDND1-211ENST00000506575 DEXIO95424 95 aa17.76■□□□□ 0.43
CLDND1-211ENST00000506575 IQCF3P0C7M6 154 aa17.76■□□□□ 0.43
CLDND1-211ENST00000506575 TCF7P36402 384 aaPredicted RBP17.76■□□□□ 0.43
CLDND1-211ENST00000506575 OTOP2Q7RTS6 562 aa17.76■□□□□ 0.43
CLDND1-211ENST00000506575 TRIM50Q86XT4 487 aa17.76■□□□□ 0.43
CLDND1-211ENST00000506575 SEPT1Q8WYJ6 367 aa17.76■□□□□ 0.43
CLDND1-211ENST00000506575 CTAGE1Q96RT6 745 aa17.76■□□□□ 0.43
CLDND1-211ENST00000506575 SLKQ9H2G2 1235 aaPredicted RBP17.76■□□□□ 0.43
CLDND1-211ENST00000506575 JPH1Q9HDC5 661 aaPredicted RBP17.76■□□□□ 0.43
CLDND1-211ENST00000506575 SH3GLB2Q9NR46 395 aa17.76■□□□□ 0.43
CLDND1-211ENST00000506575 ZBBXA8MT70 800 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 SMIM10L2AP0DMW4 78 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 SMIM10L2BP0DMW5 78 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 GNAT1P11488 350 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 ACTN1P12814 892 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 SELPP16109 830 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 NLRP5P59047 1200 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 ZNF200P98182 395 aaPredicted RBP17.75■□□□□ 0.43
CLDND1-211ENST00000506575 RASIP1Q5U651 963 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 CYP2W1Q8TAV3 490 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 ATP6V0A1Q93050 837 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 FTOQ9C0B1 505 aaKnown RBP eCLIP17.75■□□□□ 0.43
CLDND1-211ENST00000506575 SLC9A2Q9UBY0 812 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 TELO2Q9Y4R8 837 aa17.75■□□□□ 0.43
CLDND1-211ENST00000506575 MEIS1O00470 390 aa17.74■□□□□ 0.43
CLDND1-211ENST00000506575 ARP10275 920 aa17.74■□□□□ 0.43
CLDND1-211ENST00000506575 AK2P54819 239 aa17.74■□□□□ 0.43
CLDND1-211ENST00000506575 RBL2Q08999 1139 aa17.74■□□□□ 0.43
CLDND1-211ENST00000506575 LRRC8DQ7L1W4 858 aa17.74■□□□□ 0.43
CLDND1-211ENST00000506575 NIPA1Q7RTP0 329 aa17.74■□□□□ 0.43
CLDND1-211ENST00000506575 PLA2G4DQ86XP0 818 aa17.74■□□□□ 0.43
CLDND1-211ENST00000506575 DHX38Q92620 1227 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms