RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ZNF286BP0CG31 522 aa20.79■□□□□ 0.92
PDLIM7-216ENST00000506537 FOSBP53539 338 aa20.79■□□□□ 0.92
PDLIM7-216ENST00000506537 DGKDQ16760 1214 aa20.79■□□□□ 0.92
PDLIM7-216ENST00000506537 HABP4Q5JVS0 413 aaKnown RBP20.79■□□□□ 0.92
PDLIM7-216ENST00000506537 SH3RF1Q7Z6J0 888 aa20.79■□□□□ 0.92
PDLIM7-216ENST00000506537 FAM126BQ8IXS8 530 aa20.79■□□□□ 0.92
PDLIM7-216ENST00000506537 TOX2Q96NM4 488 aa20.79■□□□□ 0.92
PDLIM7-216ENST00000506537 RANBP2P49792 3224 aaKnown RBP20.79■□□□□ 0.92
PDLIM7-216ENST00000506537 XBP1P17861 261 aa20.78■□□□□ 0.92
PDLIM7-216ENST00000506537 FAAP100Q0VG06 881 aa20.78■□□□□ 0.92
PDLIM7-216ENST00000506537 ITGB3BPQ13352 177 aaPredicted RBP20.78■□□□□ 0.92
PDLIM7-216ENST00000506537 NIPA1Q7RTP0 329 aa20.78■□□□□ 0.92
PDLIM7-216ENST00000506537 IL27Q8NEV9 243 aa20.78■□□□□ 0.92
PDLIM7-216ENST00000506537 TBCKQ8TEA7 893 aa20.78■□□□□ 0.92
PDLIM7-216ENST00000506537 TMX3Q96JJ7 454 aa20.78■□□□□ 0.92
PDLIM7-216ENST00000506537 GPR20Q99678 358 aa20.78■□□□□ 0.92
PDLIM7-216ENST00000506537 AGO4Q9HCK5 861 aaKnown RBP20.78■□□□□ 0.92
PDLIM7-216ENST00000506537 TRIM43BA6NCK2 446 aa20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 MAFGO15525 162 aa20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 F2P00734 622 aa20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 CLTBP09497 229 aa20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 CIITAP33076 1130 aa20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 ZNF76P36508 570 aa20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 SP4Q02446 784 aa20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 NBPF20Q3BBV1 942 aa20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 PLA2G4DQ86XP0 818 aa20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 LENG9Q96B70 501 aa20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 TRIM43Q96BQ3 446 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 PRDM5Q9NQX1 630 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-216ENST00000506537 MROH7Q68CQ1 1323 aa20.77■□□□□ 0.91
PDLIM7-216ENST00000506537 NOP56O00567 594 aaKnown RBP20.76■□□□□ 0.91
PDLIM7-216ENST00000506537 PPFIA4O75335 1185 aa20.76■□□□□ 0.91
PDLIM7-216ENST00000506537 CD4P01730 458 aa20.76■□□□□ 0.91
PDLIM7-216ENST00000506537 EARS2Q5JPH6 523 aaKnown RBP20.76■□□□□ 0.91
PDLIM7-216ENST00000506537 GIMAP8Q8ND71 665 aaPredicted RBP20.76■□□□□ 0.91
PDLIM7-216ENST00000506537 TNFRSF25Q93038 417 aa20.76■□□□□ 0.91
PDLIM7-216ENST00000506537 C16orf70Q9BSU1 422 aa20.76■□□□□ 0.91
PDLIM7-216ENST00000506537 FAM205CA6NFA0 338 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 DCDC2CA8MYV0 355 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 HAS3O00219 553 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 B4GALT4O60513 344 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 LGALS2P05162 132 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 ITGB8P26012 769 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 NR5A1Q13285 461 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 KRT40Q6A162 431 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 KRT25Q7Z3Z0 450 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 TRIM50Q86XT4 487 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 UIMC1Q96RL1 719 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 TRPV6Q9H1D0 765 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 TBX21Q9UL17 535 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 NFASCO94856 1347 aa20.75■□□□□ 0.91
PDLIM7-216ENST00000506537 GSTTP1A0A1W2PQM5 241 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 KIAA0355O15063 1070 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 MMP1P03956 469 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 KRT2P35908 639 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 MAGEA10P43363 369 aaPredicted RBP20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 MCM2P49736 904 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 PSEN2P49810 448 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 USP11P51784 963 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 CHMP4BP1P59074 171 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 HMGN5P82970 282 aaKnown RBP20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 SETQ01105 290 aaPredicted RBP20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 NONOQ15233 471 aaKnown RBP eCLIP20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 INF2Q27J81 1249 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 PRR16Q569H4 304 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 NFRKBQ6P4R8 1299 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 SEZ6LQ9BYH1 1024 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 PRO3102Q9H379 93 aa20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 JPH1Q9HDC5 661 aaPredicted RBP20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 TRMT13Q9NUP7 481 aaKnown RBP20.74■□□□□ 0.91
PDLIM7-216ENST00000506537 CCDC194A0A1B0GVG4 234 aa20.73■□□□□ 0.91
PDLIM7-216ENST00000506537 DHX15O43143 795 aaKnown RBP20.73■□□□□ 0.91
PDLIM7-216ENST00000506537 TDP2O95551 362 aa20.73■□□□□ 0.91
PDLIM7-216ENST00000506537 GUCY1B3Q02153 619 aa20.73■□□□□ 0.91
PDLIM7-216ENST00000506537 MFSD10Q14728 455 aa20.73■□□□□ 0.91
PDLIM7-216ENST00000506537 CHRDL2Q6WN34 429 aa20.73■□□□□ 0.91
PDLIM7-216ENST00000506537 GDF15Q99988 308 aa20.73■□□□□ 0.91
PDLIM7-216ENST00000506537 TMEM39AQ9NV64 488 aa20.73■□□□□ 0.91
PDLIM7-216ENST00000506537 SLC9A2Q9UBY0 812 aa20.73■□□□□ 0.91
PDLIM7-216ENST00000506537 TCF7P36402 384 aaPredicted RBP20.72■□□□□ 0.91
PDLIM7-216ENST00000506537 KIAA0753Q2KHM9 967 aa20.72■□□□□ 0.91
PDLIM7-216ENST00000506537 FAM47CQ5HY64 1035 aa20.72■□□□□ 0.91
PDLIM7-216ENST00000506537 PIK3AP1Q6ZUJ8 805 aa20.72■□□□□ 0.91
PDLIM7-216ENST00000506537 SESTD1Q86VW0 696 aa20.72■□□□□ 0.91
PDLIM7-216ENST00000506537 DIS3L2Q8IYB7 885 aaKnown RBP20.72■□□□□ 0.91
PDLIM7-216ENST00000506537 C8orf76Q96K31 380 aa20.72■□□□□ 0.91
PDLIM7-216ENST00000506537 MBOAT7Q96N66 472 aa20.72■□□□□ 0.91
PDLIM7-216ENST00000506537 SDF4Q9BRK5 362 aa20.72■□□□□ 0.91
PDLIM7-216ENST00000506537 KATNAL1Q9BW62 490 aa20.72■□□□□ 0.91
PDLIM7-216ENST00000506537 PRKAG2Q9UGJ0 569 aa20.72■□□□□ 0.91
PDLIM7-216ENST00000506537 CYP3A7-CYP3A51PA0A087WV96 503 aa20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 BTBD18B2RXH4 712 aa20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 DDX39AO00148 427 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 IPO5O00410 1097 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 TLR3O15455 904 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 CCNE2O96020 404 aa20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 CYP3A7P24462 503 aa20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 MDM2Q00987 491 aaPredicted RBP20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 PTPN11Q06124 597 aaPredicted RBP20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 TRIM29Q14134 588 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms