RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CHTF18Q8WVB6 975 aa8.18□□□□□ -1.1
HERC4-213ENST00000506515 CD244Q9BZW8 370 aa8.18□□□□□ -1.1
HERC4-213ENST00000506515 TNFRSF12AQ9NP84 129 aa8.18□□□□□ -1.1
HERC4-213ENST00000506515 HOMER2Q9NSB8 354 aa8.18□□□□□ -1.1
HERC4-213ENST00000506515 DDX56Q9NY93 547 aaKnown RBP8.18□□□□□ -1.1
HERC4-213ENST00000506515 DBR1Q9UK59 544 aaKnown RBP8.18□□□□□ -1.1
HERC4-213ENST00000506515 YBX2Q9Y2T7 364 aaKnown RBP8.18□□□□□ -1.1
HERC4-213ENST00000506515 CC2D2AQ9P2K1 1620 aa8.18□□□□□ -1.1
HERC4-213ENST00000506515 SLC12A8A0AV02 714 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 NUDT19A8MXV4 375 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 F8W031 263 aaPredicted RBP8.17□□□□□ -1.1
HERC4-213ENST00000506515 HGSO14964 777 aaPredicted RBP8.17□□□□□ -1.1
HERC4-213ENST00000506515 BRINP1O60477 761 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 RAB11FIP3O75154 756 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 FKBP9O95302 570 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 ATP2A2P16615 1042 aaKnown RBP8.17□□□□□ -1.1
HERC4-213ENST00000506515 ADCYAP1R1P41586 468 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 TMPRSS15P98073 1019 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 CHRNA2Q15822 529 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 ARHGAP44Q17R89 818 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 ADGRF1Q5T601 910 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 FKBP9P1Q75LS8 142 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 NETO2Q8NC67 525 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 UHMK1Q8TAS1 419 aaKnown RBP8.17□□□□□ -1.1
HERC4-213ENST00000506515 AP5M1Q9H0R1 490 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 ZFP64Q9NPA5 681 aa8.17□□□□□ -1.1
HERC4-213ENST00000506515 MAN2B1O00754 1011 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 SGSM2O43147 1006 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 MAFKO60675 156 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 CYBBP04839 570 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 BPIP17213 487 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 SLC6A11P48066 632 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 EMC4Q5J8M3 183 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 FSTL4Q6MZW2 842 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 PAQR3Q6TCH7 311 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 STAG1Q8WVM7 1258 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 SEC14L1Q92503 715 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 BOCQ9BWV1 1114 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 SPTLC3Q9NUV7 552 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 H2AFY2Q9P0M6 372 aaPredicted RBP8.16□□□□□ -1.1
HERC4-213ENST00000506515 NUDT5Q9UKK9 219 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 SRPK3Q9UPE1 567 aa8.16□□□□□ -1.1
HERC4-213ENST00000506515 OAS3Q9Y6K5 1087 aaKnown RBP8.16□□□□□ -1.1
HERC4-213ENST00000506515 SCDO00767 359 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 SRGAP3O43295 1099 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 ZEB2O60315 1214 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 LTFP02788 710 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 MPOP05164 745 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 GUCY2FP51841 1108 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 KPNA1P52294 538 aaPredicted RBP8.15□□□□□ -1.1
HERC4-213ENST00000506515 ERVFRD-1P60508 538 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 IRF9Q00978 393 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 RAB3GAP1Q15042 981 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 CPZQ66K79 652 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 HHIPL2Q6UWX4 724 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 OTOP1Q7RTM1 612 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 MILR1Q7Z6M3 343 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 FERMT3Q86UX7 667 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 INTS4Q96HW7 963 aaKnown RBP8.15□□□□□ -1.1
HERC4-213ENST00000506515 SMOC1Q9H4F8 434 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 OXSMQ9NWU1 459 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 MYOTQ9UBF9 498 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 PALD1Q9ULE6 856 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 NUB1Q9Y5A7 615 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 PCDHB4Q9Y5E5 795 aa8.15□□□□□ -1.1
HERC4-213ENST00000506515 H7C1D1 291 aa8.14□□□□□ -1.11
HERC4-213ENST00000506515 GPR39O43194 453 aa8.14□□□□□ -1.11
HERC4-213ENST00000506515 TADA3O75528 432 aa8.14□□□□□ -1.11
HERC4-213ENST00000506515 PDE6BP35913 854 aa8.14□□□□□ -1.11
HERC4-213ENST00000506515 ATP13A4Q4VNC1 1196 aa8.14□□□□□ -1.11
HERC4-213ENST00000506515 RNF219Q5W0B1 726 aaPredicted RBP8.14□□□□□ -1.11
HERC4-213ENST00000506515 KCTD1Q719H9 257 aa8.14□□□□□ -1.11
HERC4-213ENST00000506515 ATG4DQ86TL0 474 aaPredicted RBP8.14□□□□□ -1.11
HERC4-213ENST00000506515 NLGN4XQ8N0W4 816 aa8.14□□□□□ -1.11
HERC4-213ENST00000506515 PEX11GQ96HA9 241 aa8.14□□□□□ -1.11
HERC4-213ENST00000506515 APOBEC2Q9Y235 224 aaKnown RBP8.14□□□□□ -1.11
HERC4-213ENST00000506515 HCFC2Q9Y5Z7 792 aa8.14□□□□□ -1.11
HERC4-213ENST00000506515 ATP23Q9Y6H3 246 aa8.14□□□□□ -1.11
HERC4-213ENST00000506515 ALG1L2C9J202 215 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 HIP1RO75146 1068 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 PDGFRBP09619 1106 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 ZBTB48P10074 688 aaPredicted RBP8.13□□□□□ -1.11
HERC4-213ENST00000506515 YBX3P16989 372 aaKnown RBP eCLIP8.13□□□□□ -1.11
HERC4-213ENST00000506515 LSSP48449 732 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 OCRLQ01968 901 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 TUSC3Q13454 348 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 FIGNQ5HY92 759 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 CYP4F22Q6NT55 531 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 RPTNQ6XPR3 784 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.13□□□□□ -1.11
HERC4-213ENST00000506515 C11orf74Q86VG3 221 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 NOSTRINQ8IVI9 506 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 SLC6A17Q9H1V8 727 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 EMC7Q9NPA0 242 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 SLC5A4Q9NY91 659 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 ASH2LQ9UBL3 628 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 ZNF652Q9Y2D9 606 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 TELO2Q9Y4R8 837 aa8.13□□□□□ -1.11
HERC4-213ENST00000506515 PHLDB1Q86UU1 1377 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 SLC9A1P19634 815 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms