RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 TMEM265A0A087WTH1 108 aa29.06■■■□□ 2.24
PVT1-201ENST00000504719 PFKMP08237 780 aa29.06■■■□□ 2.24
PVT1-201ENST00000504719 RFC2P35250 354 aa29.06■■■□□ 2.24
PVT1-201ENST00000504719 CAGE1Q8TC20 777 aa29.06■■■□□ 2.24
PVT1-201ENST00000504719 UPF3BQ9BZI7 483 aaKnown RBP29.06■■■□□ 2.24
PVT1-201ENST00000504719 UBIAD1Q9Y5Z9 338 aa29.06■■■□□ 2.24
PVT1-201ENST00000504719 GRXCR1A8MXD5 290 aa29.05■■■□□ 2.24
PVT1-201ENST00000504719 NOP56O00567 594 aaKnown RBP29.05■■■□□ 2.24
PVT1-201ENST00000504719 ITGB5P18084 799 aa29.05■■■□□ 2.24
PVT1-201ENST00000504719 DNAJB2P25686 324 aa29.05■■■□□ 2.24
PVT1-201ENST00000504719 DEFB128Q7Z7B8 93 aa29.05■■■□□ 2.24
PVT1-201ENST00000504719 CCDC155Q8N6L0 562 aa29.05■■■□□ 2.24
PVT1-201ENST00000504719 DHX38Q92620 1227 aaKnown RBP29.05■■■□□ 2.24
PVT1-201ENST00000504719 GPR20Q99678 358 aa29.05■■■□□ 2.24
PVT1-201ENST00000504719 EHMT1Q9H9B1 1298 aa29.05■■■□□ 2.24
PVT1-201ENST00000504719 GBF1Q92538 1859 aa29.04■■■□□ 2.24
PVT1-201ENST00000504719 SMCO2A6NFE2 343 aa29.04■■■□□ 2.24
PVT1-201ENST00000504719 LGALS2P05162 132 aa29.04■■■□□ 2.24
PVT1-201ENST00000504719 ANAPC15P60006 121 aa29.04■■■□□ 2.24
PVT1-201ENST00000504719 TET1Q8NFU7 2136 aa29.04■■■□□ 2.24
PVT1-201ENST00000504719 CDHR1Q96JP9 859 aa29.04■■■□□ 2.24
PVT1-201ENST00000504719 H3BRB1 525 aa29.03■■■□□ 2.24
PVT1-201ENST00000504719 ADCY7P51828 1080 aa29.03■■■□□ 2.24
PVT1-201ENST00000504719 RBL2Q08999 1139 aa29.03■■■□□ 2.24
PVT1-201ENST00000504719 PFKFB3Q16875 520 aaPredicted RBP29.03■■■□□ 2.24
PVT1-201ENST00000504719 GIMAP8Q8ND71 665 aaPredicted RBP29.03■■■□□ 2.24
PVT1-201ENST00000504719 AFAP1L1Q8TED9 768 aa29.03■■■□□ 2.24
PVT1-201ENST00000504719 TUT1Q9H6E5 874 aaKnown RBP29.03■■■□□ 2.24
PVT1-201ENST00000504719 COL6A3P12111 3177 aa29.03■■■□□ 2.24
PVT1-201ENST00000504719 ATP9AO75110 1047 aa29.02■■■□□ 2.24
PVT1-201ENST00000504719 KCNA2P16389 499 aa29.02■■■□□ 2.24
PVT1-201ENST00000504719 EVCP57679 992 aa29.02■■■□□ 2.24
PVT1-201ENST00000504719 ZNF200P98182 395 aaPredicted RBP29.02■■■□□ 2.24
PVT1-201ENST00000504719 PTK7Q13308 1070 aa29.02■■■□□ 2.24
PVT1-201ENST00000504719 HIC1Q14526 733 aa29.02■■■□□ 2.24
PVT1-201ENST00000504719 PBX4Q9BYU1 374 aa29.02■■■□□ 2.24
PVT1-201ENST00000504719 GLT8D2Q9H1C3 349 aa29.02■■■□□ 2.24
PVT1-201ENST00000504719 JADE2Q9NQC1 790 aa29.02■■■□□ 2.24
PVT1-201ENST00000504719 TELO2Q9Y4R8 837 aa29.02■■■□□ 2.24
PVT1-201ENST00000504719 PRPF3O43395 683 aaKnown RBP29.01■■■□□ 2.23
PVT1-201ENST00000504719 FOSP01100 380 aaPredicted RBP29.01■■■□□ 2.23
PVT1-201ENST00000504719 SCG2P13521 617 aa29.01■■■□□ 2.23
PVT1-201ENST00000504719 PBX2P40425 430 aa29.01■■■□□ 2.23
PVT1-201ENST00000504719 CLK2P49760 499 aaKnown RBP29.01■■■□□ 2.23
PVT1-201ENST00000504719 CDX2Q99626 313 aaPredicted RBP29.01■■■□□ 2.23
PVT1-201ENST00000504719 MAFGO15525 162 aa29■■■□□ 2.23
PVT1-201ENST00000504719 MTMR1Q13613 665 aa29■■■□□ 2.23
PVT1-201ENST00000504719 TOB2Q14106 344 aaPredicted RBP29■■■□□ 2.23
PVT1-201ENST00000504719 PKN1Q16512 942 aa29■■■□□ 2.23
PVT1-201ENST00000504719 TIFAQ96CG3 184 aa29■■■□□ 2.23
PVT1-201ENST00000504719 PGBD1Q96JS3 809 aa29■■■□□ 2.23
PVT1-201ENST00000504719 ANO3Q9BYT9 981 aa29■■■□□ 2.23
PVT1-201ENST00000504719 KAT6AQ92794 2004 aa28.99■■■□□ 2.23
PVT1-201ENST00000504719 CKBP12277 381 aa28.99■■■□□ 2.23
PVT1-201ENST00000504719 SELPP16109 830 aa28.99■■■□□ 2.23
PVT1-201ENST00000504719 PDIA3P30101 505 aaKnown RBP28.99■■■□□ 2.23
PVT1-201ENST00000504719 HOXC8P31273 242 aa28.99■■■□□ 2.23
PVT1-201ENST00000504719 SP4Q02446 784 aa28.99■■■□□ 2.23
PVT1-201ENST00000504719 NTRK3Q16288 839 aa28.99■■■□□ 2.23
PVT1-201ENST00000504719 TRIM71Q2Q1W2 868 aaKnown RBP28.99■■■□□ 2.23
PVT1-201ENST00000504719 MXRA8Q9BRK3 442 aa28.99■■■□□ 2.23
PVT1-201ENST00000504719 PDRG1Q9NUG6 133 aa28.99■■■□□ 2.23
PVT1-201ENST00000504719 TMEM260Q9NX78 707 aa28.99■■■□□ 2.23
PVT1-201ENST00000504719 SLC4A7Q9Y6M7 1214 aa28.99■■■□□ 2.23
PVT1-201ENST00000504719 C17orf102A2RUQ5 167 aa28.98■■■□□ 2.23
PVT1-201ENST00000504719 ZBBXA8MT70 800 aa28.98■■■□□ 2.23
PVT1-201ENST00000504719 SMIM10L2AP0DMW4 78 aa28.98■■■□□ 2.23
PVT1-201ENST00000504719 SMIM10L2BP0DMW5 78 aa28.98■■■□□ 2.23
PVT1-201ENST00000504719 ACTN1P12814 892 aa28.98■■■□□ 2.23
PVT1-201ENST00000504719 AP3B2Q13367 1082 aa28.98■■■□□ 2.23
PVT1-201ENST00000504719 GPNMBQ14956 572 aa28.98■■■□□ 2.23
PVT1-201ENST00000504719 LRRC8DQ7L1W4 858 aa28.98■■■□□ 2.23
PVT1-201ENST00000504719 WNT8BQ93098 351 aa28.98■■■□□ 2.23
PVT1-201ENST00000504719 FTOQ9C0B1 505 aaKnown RBP eCLIP28.98■■■□□ 2.23
PVT1-201ENST00000504719 PARNO95453 639 aaKnown RBP28.97■■■□□ 2.23
PVT1-201ENST00000504719 UTP14CQ5TAP6 766 aaKnown RBP28.97■■■□□ 2.23
PVT1-201ENST00000504719 TRIM50Q86XT4 487 aa28.97■■■□□ 2.23
PVT1-201ENST00000504719 PHKBQ93100 1093 aa28.97■■■□□ 2.23
PVT1-201ENST00000504719 RNPEPQ9H4A4 650 aa28.97■■■□□ 2.23
PVT1-201ENST00000504719 ZNF576Q9H609 170 aa28.97■■■□□ 2.23
PVT1-201ENST00000504719 ESYT2A0FGR8 921 aa28.96■■■□□ 2.23
PVT1-201ENST00000504719 CCT2P78371 535 aaKnown RBP28.96■■■□□ 2.23
PVT1-201ENST00000504719 RAB30Q15771 203 aa28.96■■■□□ 2.23
PVT1-201ENST00000504719 CYP2W1Q8TAV3 490 aa28.96■■■□□ 2.23
PVT1-201ENST00000504719 IL17RAQ96F46 866 aa28.96■■■□□ 2.23
PVT1-201ENST00000504719 LARP6Q9BRS8 491 aaKnown RBP28.96■■■□□ 2.23
PVT1-201ENST00000504719 ZMYND12Q9H0C1 365 aa28.96■■■□□ 2.23
PVT1-201ENST00000504719 PKD2L1Q9P0L9 805 aa28.96■■■□□ 2.23
PVT1-201ENST00000504719 MSRAQ9UJ68 235 aa28.96■■■□□ 2.23
PVT1-201ENST00000504719 ZNF215Q9UL58 517 aaPredicted RBP28.96■■■□□ 2.23
PVT1-201ENST00000504719 GSTTP1A0A1W2PQM5 241 aa28.95■■■□□ 2.22
PVT1-201ENST00000504719 IFNAR1P17181 557 aa28.95■■■□□ 2.22
PVT1-201ENST00000504719 SREBF1P36956 1147 aa28.95■■■□□ 2.22
PVT1-201ENST00000504719 TRAF7Q6Q0C0 670 aa28.95■■■□□ 2.22
PVT1-201ENST00000504719 SERINC5Q86VE9 423 aa28.95■■■□□ 2.22
PVT1-201ENST00000504719 CCDC12Q8WUD4 166 aaPredicted RBP28.95■■■□□ 2.22
PVT1-201ENST00000504719 MYLIPQ8WY64 445 aa28.95■■■□□ 2.22
PVT1-201ENST00000504719 SEPT1Q8WYJ6 367 aa28.95■■■□□ 2.22
PVT1-201ENST00000504719 ATP6V0A1Q93050 837 aa28.95■■■□□ 2.22
PVT1-201ENST00000504719 RNF26Q9BY78 433 aaPredicted RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms