RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 TMEM60Q9H2L4 133 aa15.79■□□□□ 0.12
DDR1-253ENST00000504651 MLXIPQ9HAP2 919 aa15.79■□□□□ 0.12
DDR1-253ENST00000504651 KCNMB3Q9NPA1 279 aa15.79■□□□□ 0.12
DDR1-253ENST00000504651 CEP131Q9UPN4 1083 aa15.79■□□□□ 0.12
DDR1-253ENST00000504651 ATP6V1DQ9Y5K8 247 aa15.79■□□□□ 0.12
DDR1-253ENST00000504651 HTTP42858 3142 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 DYNC1LI2O43237 492 aaPredicted RBP15.78■□□□□ 0.12
DDR1-253ENST00000504651 GAS7O60861 476 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 FARP2O94887 1054 aaPredicted RBP15.78■□□□□ 0.12
DDR1-253ENST00000504651 BMP15O95972 392 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 SP4Q02446 784 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 ARHGAP1Q07960 439 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 SF3A1Q15459 793 aaKnown RBP15.78■□□□□ 0.12
DDR1-253ENST00000504651 CELF3Q5SZQ8 465 aaKnown RBP15.78■□□□□ 0.12
DDR1-253ENST00000504651 METTL7BQ6UX53 244 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 CYFIP1Q7L576 1253 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 SLFN12Q8IYM2 578 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 SLC5A5Q92911 643 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 GJA10Q969M2 543 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 FAM20AQ96MK3 541 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 DEFB118Q96PH6 123 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 USP28Q96RU2 1077 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 SPC25Q9HBM1 224 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 JPH1Q9HDC5 661 aaPredicted RBP15.78■□□□□ 0.12
DDR1-253ENST00000504651 TBC1D22BQ9NU19 505 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 Q9Y3F1 56 aa15.78■□□□□ 0.12
DDR1-253ENST00000504651 LAD1O00515 517 aa15.77■□□□□ 0.12
DDR1-253ENST00000504651 NOP56O00567 594 aaKnown RBP15.77■□□□□ 0.12
DDR1-253ENST00000504651 PGK1P00558 417 aa15.77■□□□□ 0.12
DDR1-253ENST00000504651 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
DDR1-253ENST00000504651 C6orf222P0C671 652 aaPredicted RBP15.77■□□□□ 0.12
DDR1-253ENST00000504651 CEBPZQ03701 1054 aaKnown RBP15.77■□□□□ 0.12
DDR1-253ENST00000504651 PTGDRQ13258 359 aa15.77■□□□□ 0.12
DDR1-253ENST00000504651 LAMC2Q13753 1193 aa15.77■□□□□ 0.12
DDR1-253ENST00000504651 SPATA33Q96N06 139 aa15.77■□□□□ 0.12
DDR1-253ENST00000504651 RIT2Q99578 217 aa15.77■□□□□ 0.12
DDR1-253ENST00000504651 TMEM106CQ9BVX2 250 aa15.77■□□□□ 0.12
DDR1-253ENST00000504651 UPF3AQ9H1J1 476 aaKnown RBP15.77■□□□□ 0.12
DDR1-253ENST00000504651 SLC9A2Q9UBY0 812 aa15.77■□□□□ 0.12
DDR1-253ENST00000504651 CLIC4Q9Y696 253 aa15.77■□□□□ 0.12
DDR1-253ENST00000504651 CHMP2AO43633 222 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 PSMD10O75832 226 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 NCLP19338 710 aaKnown RBP15.76■□□□□ 0.11
DDR1-253ENST00000504651 TXKP42681 527 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 CPT1AP50416 773 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 GJA9P57773 515 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 ATP2C1P98194 919 aaPredicted RBP15.76■□□□□ 0.11
DDR1-253ENST00000504651 KRT76Q01546 638 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 DNM1Q05193 864 aaKnown RBP15.76■□□□□ 0.11
DDR1-253ENST00000504651 TMEM266Q2M3C6 531 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 LHX8Q68G74 356 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 HAS1Q92839 578 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 EMID1Q96A84 441 aaPredicted RBP15.76■□□□□ 0.11
DDR1-253ENST00000504651 MTMR9Q96QG7 549 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 BCAS3Q9H6U6 928 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 POLR3EQ9NVU0 708 aa15.76■□□□□ 0.11
DDR1-253ENST00000504651 ELP1O95163 1332 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 MYADML2A6NDP7 307 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 DHX15O43143 795 aaKnown RBP15.75■□□□□ 0.11
DDR1-253ENST00000504651 ADAMTS4O75173 837 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 GJB1P08034 283 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 MMP3P08254 477 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 KRT85P78386 507 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 IRX5P78411 483 aaPredicted RBP15.75■□□□□ 0.11
DDR1-253ENST00000504651 BEX3Q00994 111 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 STK38Q15208 465 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 HSDL1Q3SXM5 330 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 BRDTQ58F21 947 aaPredicted RBP15.75■□□□□ 0.11
DDR1-253ENST00000504651 ATL3Q6DD88 541 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 RNF180Q86T96 592 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 PPTC7Q8NI37 304 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 U2AF1L4Q8WU68 220 aaKnown RBP15.75■□□□□ 0.11
DDR1-253ENST00000504651 AFG1LQ8WV93 481 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 UNC45AQ9H3U1 944 aa15.75■□□□□ 0.11
DDR1-253ENST00000504651 TTC12Q9H892 705 aaPredicted RBP15.75■□□□□ 0.11
DDR1-253ENST00000504651 TFIP11Q9UBB9 837 aaKnown RBP15.75■□□□□ 0.11
DDR1-253ENST00000504651 PRPHP41219 470 aa15.74■□□□□ 0.11
DDR1-253ENST00000504651 NASPP49321 788 aaPredicted RBP15.74■□□□□ 0.11
DDR1-253ENST00000504651 PTPAQ15257 358 aa15.74■□□□□ 0.11
DDR1-253ENST00000504651 FSCN1Q16658 493 aaKnown RBP15.74■□□□□ 0.11
DDR1-253ENST00000504651 NCAPH2Q6IBW4 605 aa15.74■□□□□ 0.11
DDR1-253ENST00000504651 ZNF746Q6NUN9 644 aaPredicted RBP15.74■□□□□ 0.11
DDR1-253ENST00000504651 C4orf32Q8N8J7 132 aa15.74■□□□□ 0.11
DDR1-253ENST00000504651 GPR20Q99678 358 aa15.74■□□□□ 0.11
DDR1-253ENST00000504651 VAV3Q9UKW4 847 aa15.74■□□□□ 0.11
DDR1-253ENST00000504651 CFAP45Q9UL16 551 aa15.74■□□□□ 0.11
DDR1-253ENST00000504651 PCDHA12Q9UN75 941 aa15.74■□□□□ 0.11
DDR1-253ENST00000504651 SAMM50Q9Y512 469 aa15.74■□□□□ 0.11
DDR1-253ENST00000504651 TCHHQ07283 1943 aa15.74■□□□□ 0.11
DDR1-253ENST00000504651 WDR81Q562E7 1941 aa15.74■□□□□ 0.11
DDR1-253ENST00000504651 POTEFA5A3E0 1075 aa15.73■□□□□ 0.11
DDR1-253ENST00000504651 WDR64B1ANS9 1081 aa15.73■□□□□ 0.11
DDR1-253ENST00000504651 KBTBD13C9JR72 458 aa15.73■□□□□ 0.11
DDR1-253ENST00000504651 ZEB2O60315 1214 aa15.73■□□□□ 0.11
DDR1-253ENST00000504651 SGPL1O95470 568 aa15.73■□□□□ 0.11
DDR1-253ENST00000504651 YEATS4O95619 227 aa15.73■□□□□ 0.11
DDR1-253ENST00000504651 CCNE2O96020 404 aa15.73■□□□□ 0.11
DDR1-253ENST00000504651 CST5P28325 142 aaPredicted RBP15.73■□□□□ 0.11
DDR1-253ENST00000504651 TCF7P36402 384 aaPredicted RBP15.73■□□□□ 0.11
DDR1-253ENST00000504651 GJA8P48165 433 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms