RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 VAV2P52735 878 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 GFPT1Q06210 699 aaPredicted RBP12.48□□□□□ -0.41
PAPD4-207ENST00000504233 CCDC40Q4G0X9 1142 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 TDRD12Q587J7 1177 aaKnown RBP12.48□□□□□ -0.41
PAPD4-207ENST00000504233 CCDC170Q8IYT3 715 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 GUF1Q8N442 669 aaKnown RBP12.48□□□□□ -0.41
PAPD4-207ENST00000504233 PANK4Q9NVE7 773 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 PCDHA13Q9Y5I0 950 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 ADAMTSL1Q8N6G6 1762 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 PVALEFA0A1B0GWK0 134 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 H0YHG0 523 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 BUB1O43683 1085 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 USP14P54578 494 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 PAPD7Q5XG87 772 aaKnown RBP12.48□□□□□ -0.41
PAPD4-207ENST00000504233 MYOCDQ8IZQ8 938 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 COG1Q8WTW3 980 aa12.48□□□□□ -0.41
PAPD4-207ENST00000504233 MYH7BA7E2Y1 1941 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 MEIS1O00470 390 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 ZBTB5O15062 677 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 HOXA10P31260 410 aaPredicted RBP12.47□□□□□ -0.41
PAPD4-207ENST00000504233 PSEN1P49768 467 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 MRPL12P52815 198 aaKnown RBP12.47□□□□□ -0.41
PAPD4-207ENST00000504233 NAP1L1P55209 391 aaKnown RBP12.47□□□□□ -0.41
PAPD4-207ENST00000504233 PPP2R5AQ15172 486 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 EZH2Q15910 746 aaKnown RBP12.47□□□□□ -0.41
PAPD4-207ENST00000504233 QRICH1Q2TAL8 776 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 USH1GQ495M9 461 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 TMEM119Q4V9L6 283 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 FAM26FQ5R3K3 315 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 DNAJC19Q96DA6 116 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 COA1Q9GZY4 146 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 CXorf56Q9H5V9 222 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 DNAJC18Q9H819 358 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 PLAGL2Q9UPG8 496 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 PCDHA1Q9Y5I3 950 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 AFF2P51816 1311 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 LY75O60449 1722 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 POTEFA5A3E0 1075 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 POTEIP0CG38 1075 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 MYBL2P10244 700 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 IKQ13123 557 aaPredicted RBP12.47□□□□□ -0.41
PAPD4-207ENST00000504233 MUM1L1Q5H9M0 696 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 APOBEC3HQ6NTF7 200 aaKnown RBP12.47□□□□□ -0.41
PAPD4-207ENST00000504233 NFRKBQ6P4R8 1299 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 POTEGQ6S5H5 508 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 POTEEQ6S8J3 1075 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 GPBP1Q86WP2 473 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 EHBP1Q8NDI1 1231 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 CRAMP1Q96RY5 1269 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 TSG101Q99816 390 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 SALL4Q9UJQ4 1053 aa12.47□□□□□ -0.41
PAPD4-207ENST00000504233 MYO1FO00160 1098 aa12.46□□□□□ -0.41
PAPD4-207ENST00000504233 GDF11O95390 407 aa12.46□□□□□ -0.41
PAPD4-207ENST00000504233 KRT18P05783 430 aaKnown RBP12.46□□□□□ -0.41
PAPD4-207ENST00000504233 HLA-DOAP06340 250 aa12.46□□□□□ -0.41
PAPD4-207ENST00000504233 EEF2P13639 858 aaKnown RBP12.46□□□□□ -0.41
PAPD4-207ENST00000504233 PPP1R2P41236 205 aa12.46□□□□□ -0.41
PAPD4-207ENST00000504233 SLC1A4P43007 532 aa12.46□□□□□ -0.41
PAPD4-207ENST00000504233 RASSF7Q02833 373 aa12.46□□□□□ -0.41
PAPD4-207ENST00000504233 PDIA5Q14554 519 aa12.46□□□□□ -0.41
PAPD4-207ENST00000504233 HERC4Q5GLZ8 1057 aaPredicted RBP12.46□□□□□ -0.41
PAPD4-207ENST00000504233 SLC30A10Q6XR72 485 aa12.46□□□□□ -0.41
PAPD4-207ENST00000504233 SP8Q8IXZ3 490 aa12.46□□□□□ -0.41
PAPD4-207ENST00000504233 ATP6V0A2Q9Y487 856 aa12.46□□□□□ -0.41
PAPD4-207ENST00000504233 hCG_1984214I3L0E3 225 aa12.46□□□□□ -0.42
PAPD4-207ENST00000504233 CLK2P49760 499 aaKnown RBP12.46□□□□□ -0.42
PAPD4-207ENST00000504233 KCNMA1Q12791 1236 aa12.46□□□□□ -0.42
PAPD4-207ENST00000504233 MSL1Q68DK7 614 aa12.46□□□□□ -0.42
PAPD4-207ENST00000504233 ZNF713Q8N859 430 aaPredicted RBP12.46□□□□□ -0.42
PAPD4-207ENST00000504233 HDAC7Q8WUI4 952 aa12.46□□□□□ -0.42
PAPD4-207ENST00000504233 CD248Q9HCU0 757 aa12.46□□□□□ -0.42
PAPD4-207ENST00000504233 SUFUQ9UMX1 484 aa12.46□□□□□ -0.42
PAPD4-207ENST00000504233 PLIN4Q96Q06 1357 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 A0A1W2PQJ5 194 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 DDTLA6NHG4 134 aaPredicted RBP12.45□□□□□ -0.42
PAPD4-207ENST00000504233 USO1O60763 962 aaKnown RBP12.45□□□□□ -0.42
PAPD4-207ENST00000504233 EIF3JO75822 258 aaKnown RBP12.45□□□□□ -0.42
PAPD4-207ENST00000504233 PLA2G4BP0C869 781 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 MAP2K2P36507 400 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 MAGEA1P43355 309 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 MAGEA9P43362 315 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 SLC7A5Q01650 507 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 ACTN3Q08043 901 aaPredicted RBP12.45□□□□□ -0.42
PAPD4-207ENST00000504233 SEMA3FQ13275 785 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 PRR16Q569H4 304 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 PPP4R3AQ6IN85 833 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 BAP1Q92560 729 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 TEKT1Q969V4 418 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 P2RX7Q99572 595 aaKnown RBP12.45□□□□□ -0.42
PAPD4-207ENST00000504233 LSM14BQ9BX40 385 aaKnown RBP12.45□□□□□ -0.42
PAPD4-207ENST00000504233 BCAS3Q9H6U6 928 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 SH2D4AQ9H788 454 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 GEMIN8Q9NWZ8 242 aaKnown RBP12.45□□□□□ -0.42
PAPD4-207ENST00000504233 POLR2FP61218 127 aaKnown RBP12.45□□□□□ -0.42
PAPD4-207ENST00000504233 LRRC63Q05C16 580 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 SEPT2Q15019 361 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 CDC37Q16543 378 aaPredicted RBP12.45□□□□□ -0.42
PAPD4-207ENST00000504233 FIGNQ5HY92 759 aa12.45□□□□□ -0.42
PAPD4-207ENST00000504233 ZNF622Q969S3 477 aaKnown RBP eCLIP12.45□□□□□ -0.42
PAPD4-207ENST00000504233 GBP3Q9H0R5 595 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms